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Summary Attributions Wiki
XB-MORPHOLINO-17311239
Morpholino Name: prdm1 MO1
Synonyms: Blimp1, TGas049g17, XtBlimp1
Target mRNA: prdm1

Morpholino Type: uncategorized morpholino
Sequence: 5' ATTCCTTCCATATCCATTTTCATTG 3'

Source: Gene Tools LLC


Target mRNA tropicalis laevis.L laevis.S
Identities 25/25 25/25 25/25
genome
MO
 
5' CAATGAAAATGGATATGGAAGGAAT 3'
   |||||||||||||||||||||||||
3' GTTACTTTTACCTATACCTTCCTTA 5'
 
5' CAATGAAAATGGATATGGAAGGAAT 3'
   |||||||||||||||||||||||||
3' GTTACTTTTACCTATACCTTCCTTA 5'
 
5' CAATGAAAATGGATATGGAAGGAAT 3'
   |||||||||||||||||||||||||
3' GTTACTTTTACCTATACCTTCCTTA 5'
    
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr5L:83080053..83080077 25/25 Antisense target prdm1.L
Chr5S:66160908..66160932 25/25 Antisense target prdm1.S
Chr8S:31666404..31666428 21/25 Sense off-target ralgds.S
Chr1S:161270416..161270440 21/25 Antisense off-target epb41l4a.S
Chr5S:92521618..92521642 21/25 Antisense off-target LOC108718075
Chr5S:124451552..124451576 22/25 unknown
Chr3S:53318940..53318964 21/25 unknown
tropicalis 10.0 Chr5:79519093..79519117 25/25 Antisense target prdm1
Chr5:79519093..79519117 25/25 Sense off-target atg5
Chr1:32216012..32216036 21/25 Sense off-target stim2
Chr2:109536366..109536390 21/25 Antisense off-target slc5a7
Chr1:48962527..48962551 21/25 Antisense off-target galntl6
Chr3:142045683..142045707 21/25 Sense off-target LOC100170611
Chr4:30974838..30974862 21/25 Antisense off-target LOC100492951
Chr8:12317323..12317347 22/25 unknown
Chr10:17979645..17979669 21/25 unknown
Chr6:83385666..83385690 21/25 unknown
Publications
???morpholino.displaySummary.papersFirst??? Defining synphenotype groups in Xenopus tropicalis by use of antisense morpholino oligonucleotides., PLoS Genet 2006                                      
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