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XB-MORPHOLINO-17311477

Morpholino Name: smad9 MO2
Synonyms: Smad8, TTpA007k16, XtSmad8
mRNA Target: smad9

Morpholino Type:
Sequence:
5' AGTGCTGGCGTGCATAGGATTAGCT 3'

Source: Gene Tools LLC


mRNA Target tropicalis laevis.L laevis.S
Identities 25/25 24/25
genomic

MO
5' AGCTAATCCTATGCACGCCAGCACT 3' ||||||||||||||||||||||||| 3' TCGATTAGGATACGTGCGGTCGTGA 5' 5' AGCGAATCCTATGCACGCCAGCACT 3' ||| ||||||||||||||||||||| 3' TCGATTAGGATACGTGCGGTCGTGA 5'
Genomic Alignments Position Identity Strand Target mRNA
laevis 7.1 Scaffold91366:946480-946504 24/25 Antisense target smad9.S
Scaffold200825:2381329-2381353 23/25 Antisense off-target Xelaev16025461m
Scaffold1168:1966980-1967004 21/25 unknown
Scaffold211:293948-293972 21/25 unknown
Scaffold245359:598-622 21/25 Sense off-target Xelaev16032856m
Scaffold2589:1781396-1781420 21/25 unknown
Scaffold265107:4461652-4461676 21/25 unknown
Scaffold335264:144042-144066 21/25 unknown
Scaffold36401:2170737-2170761 21/25 unknown
Scaffold373158:1757015-1757039 21/25 unknown
Scaffold58038:131838-131862 21/25 unknown
Scaffold86967:527077-527101 21/25 unknown
tropicalis 7.1 scaffold_2:102350746-102350770 25/25 Antisense target smad9
scaffold_1:184916327-184916351 21/25 unknown
Publications
First: Defining synphenotype groups in Xenopus tropicalis by use of antisense morpholino oligonucleotides. [PLoS Genet 2006]
Most recent:
View All Papers



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