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XB-MORPHOLINO-19778017
Morpholino Name:
ascl1 MO6
Synonyms: Ascl1a Moa2
mRNA Target: ascl1
Morpholino Type: uncategorized morpholino
Sequence:
5' GTTCCCTGGCTCTAGCTCTGTGC 3'
Source: Gene Tools LLC
Synonyms: Ascl1a Moa2
mRNA Target: ascl1
Morpholino Type: uncategorized morpholino
Sequence:
5' GTTCCCTGGCTCTAGCTCTGTGC 3'
Source: Gene Tools LLC
| mRNA Target | tropicalis | laevis.L | laevis.S | ||
| Identities | 23/23 | 22/23 | |||
| genomic MO |
5' GCACAGAGCTAGAGCCAGGGAAC 3' ||||||||||||||||||||||| 3' CGTGTCTCGATCTCGGTCCCTTG 5' | 5' GCACAGAGCTAGAGGCAGGGAAC 3' |||||||||||||| |||||||| 3' CGTGTCTCGATCTCGGTCCCTTG 5' | |||
Genomic Alignments  |
Position | Identity | Strand | Target | mRNA |
| laevis 9.2 | chr3L:42576698..42576720 | 23/23 | Antisense | target | ascl1.L |
| chr3S:95729436..95729458 | 22/23 | Antisense | target | ascl1.S | |
| chr5L:155092080..155092102 | 20/23 | Antisense | off-target | rab10.L | |
| chr1S:132899190..132899212 | 20/23 | Sense | off-target | aacs.S | |
| chr7S:70280994..70281016 | 20/23 | Sense | off-target | megf6.S | |
| chr3L:19797657..19797679 | 19/23 | Antisense | off-target | ik.L | |
| chr7S:84330985..84331007 | 19/23 | unknown | |||
| chr8L:32830350..32830372 | 19/23 | Antisense | off-target | diaph2.L | |
| chr9_10S:10197347..10197369 | 19/23 | Antisense | off-target | nfatc2.S | |
| tropicalis 10.0 | Chr1:15076022..15076044 | 19/23 | unknown | ||
| Chr4:16452255..16452277 | 19/23 | Sense | off-target | ppfibp2 | |
| Chr4:48090914..48090936 | 19/23 | Antisense | off-target | LOC101733881 | |
| Chr5:77588997..77589019 | 19/23 | unknown | |||
| Chr6:146067186..146067208 | 19/23 | unknown | |||
| Chr7:117838240..117838262 | 19/23 | unknown | |||
| Publications | |||||
| First: |
A novel role for Ascl1 in the regulation of mesendoderm formation via HDAC-dependent antagonism of VegT., Development 2016  |
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| Most recent: | |||||
| View All Papers | |||||
