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XB-MORPHOLINO-22169651
Morpholino Name:
vldlr cMO1
Synonyms:
Target mRNA: vldlr
Morpholino Type: control morpholino
Sequence: 5' GATGGGAGTGTGATGGAGAC 3'
Source: Gene Tools LLC
Synonyms:
Target mRNA: vldlr
Morpholino Type: control morpholino
Sequence: 5' GATGGGAGTGTGATGGAGAC 3'
Source: Gene Tools LLC
| Target mRNA | tropicalis | laevis.L | laevis.S | ||
| Identities | 20/20 | 20/20 | 20/20 | ||
| genomic MO |
5' GTCTCCATCACACTCCCATC 3' |||||||||||||||||||| 3' CAGAGGTAGTGTGAGGGTAG 5' | 5' GTCTCCATCACACTCCCATC 3' |||||||||||||||||||| 3' CAGAGGTAGTGTGAGGGTAG 5' | 5' GTCTCCATCACACTCCCATC 3' |||||||||||||||||||| 3' CAGAGGTAGTGTGAGGGTAG 5' | ||
Genomic Alignments  |
Position | Identity | Strand | Target | mRNA |
| laevis 9.2 | Scaffold58:256297..256316 | 20/20 | Sense | target | vldlr.S |
| chr1L:126334050..126334069 | 20/20 | Sense | target | vldlr.L | |
| chr1S:6953837..6953856 | 18/20 | Antisense | off-target | Xelaev18008818m | |
| chr4S:26387531..26387550 | 18/20 | Antisense | off-target | Xelaev18024704m | |
| chr4S:26387531..26387550 | 18/20 | Antisense | off-target | LOC108715348 | |
| chr3L:85782392..85782411 | 17/20 | Sense | off-target | LOC108711340 [provisional:duox1] | |
| chr5S:48970382..48970401 | 17/20 | Sense | off-target | LOC108717885 [provisional:map3k5] | |
| chr3S:43210774..43210793 | 16/20 | Antisense | off-target | LOC108712842 | |
| chr3S:43210774..43210793 | 16/20 | Antisense | off-target | aen.S | |
| Scaffold24:2712620..2712639 | 19/20 | unknown | |||
| chr2L:178920111..178920130 | 19/20 | unknown | |||
| chr2L:178920243..178920262 | 19/20 | unknown | |||
| chr4S:107043606..107043625 | 19/20 | unknown | |||
| chr9_10S:7856124..7856143 | 19/20 | unknown | |||
| chr9_10S:7856269..7856288 | 19/20 | unknown | |||
| Scaffold42066:440..459 | 18/20 | unknown | |||
| chr1S:5680089..5680108 | 18/20 | unknown | |||
| chr4S:107043426..107043445 | 18/20 | unknown | |||
| chr5S:100501388..100501407 | 18/20 | unknown | |||
| chr6L:132332735..132332754 | 17/20 | unknown | |||
| Scaffold38903:129..148 | 16/20 | unknown | |||
| chr2S:19323156..19323175 | 16/20 | unknown | |||
| chr4S:16421941..16421960 | 16/20 | unknown | |||
| chr6S:83584163..83584182 | 16/20 | unknown | |||
| chr7L:58855498..58855517 | 16/20 | unknown | |||
| tropicalis 10.0 | Chr1:128081143..128081162 | 20/20 | Sense | target | vldlr |
| Chr6:16055842..16055861 | 19/20 | Sense | off-target | dpp6 | |
| Chr5:58932370..58932389 | 17/20 | Sense | off-target | map3k5 | |
| Chr8:72077031..72077050 | 17/20 | Sense | off-target | wdr46 | |
| Chr2:3732756..3732775 | 18/20 | unknown | |||
| Publications | |||||
| First: |
The VLDL receptor regulates membrane progesterone receptor trafficking and non-genomic signaling., J Cell Sci 2018  |
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| Most recent: | |||||
| View All Papers | |||||
