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The Molecular Mechanism of Body Axis Induction in Lampreys May Differ from That in Amphibians. , Ermakova GV, Kucheryavyy AV, Zaraisky AG , Bayramov AV., Int J Mol Sci. February 19, 2024; 25 (4):
The early dorsal signal in vertebrate embryos requires endolysosomal membrane trafficking. , Azbazdar Y, De Robertis EM ., Bioessays. January 1, 2024; 46 (1): e2300179.
The role of Wnt signaling in Xenopus neural induction. , Velloso I, Han W, He X , Abreu JG ., Curr Top Dev Biol. January 1, 2023; 153 229-254.
Normal Table of Xenopus development: a new graphical resource. , Zahn N , James-Zorn C , Ponferrada VG , Adams DS , Grzymkowski J, Buchholz DR , Nascone-Yoder NM , Horb M , Moody SA , Vize PD , Zorn AM ., Development. July 15, 2022; 149 (14):
Evo-Devo of Urbilateria and its larval forms. , De Robertis EM , Tejeda-Muñoz N., Dev Biol. July 1, 2022; 487 10-20.
ccr7 affects both morphogenesis and differentiation during early Xenopus embryogenesis. , Goto T , Michiue T , Shibuya H ., Dev Growth Differ. June 1, 2022; 64 (5): 254-260.
Transmembrane H+ fluxes and the regulation of neural induction in Xenopus laevis. , Leung HC, Leclerc C , Moreau M , Shipley AM, Miller AL , Miller AL , Webb SE., Zygote. April 1, 2022; 30 (2): 267-278.
Targeted search for scaling genes reveals matrixmetalloproteinase 3 as a scaler of the dorsal- ventral pattern in Xenopus laevis embryos. , Orlov EE, Nesterenko AM, Korotkova DD, Parshina EA, Martynova NY, Zaraisky AG ., Dev Cell. January 10, 2022; 57 (1): 95-111.e12.
Goosecoid Controls Neuroectoderm Specification via Dual Circuits of Direct Repression and Indirect Stimulation in Xenopus Embryos. , Umair Z, Kumar V , Goutam RS, Kumar S , Kumar S , Lee U, Kim J ., Mol Cells. October 31, 2021; 44 (10): 723-735.
Rab7 is required for mesoderm patterning and gastrulation in Xenopus. , Kreis J, Wielath FM, Vick P ., Biol Open. July 15, 2021; 10 (7):
Smad2 and Smad3 differentially modulate chordin transcription via direct binding on the distal elements in gastrula Xenopus embryos. , Kumar V , Umair Z, Kumar S , Kumar S , Lee U, Kim J ., Biochem Biophys Res Commun. June 25, 2021; 559 168-175.
Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates. , Bright AR, van Genesen S, Li Q , Grasso A, Frölich S, van der Sande M, van Heeringen SJ, Veenstra GJC ., EMBO J. May 3, 2021; 40 (9): e104913.
A temporally resolved transcriptome for developing "Keller" explants of the Xenopus laevis dorsal marginal zone. , Kakebeen AD, Huebner RJ, Shindo A, Kwon K, Kwon T , Wills AE , Wallingford JB ., Dev Dyn. May 1, 2021; 250 (5): 717-731.
Segregation of brain and organizer precursors is differentially regulated by Nodal signaling at blastula stage. , Castro Colabianchi AM, Tavella MB, Boyadjián López LE, Rubinstein M, Franchini LF, López SL ., Biol Open. February 25, 2021; 10 (2):
Dact-4 is a Xenopus laevis Spemann organizer gene related to the Dapper/Frodo antagonist of β-catenin family of proteins. , Colozza G , De Robertis EM ., Gene Expr Patterns. December 1, 2020; 38 119153.
Foxd4l1.1 negatively regulates transcription of neural repressor ventx1.1 during neuroectoderm formation in Xenopus embryos. , Kumar S , Kumar S , Umair Z, Kumar V , Kumar S , Lee U, Kim J ., Sci Rep. October 8, 2020; 10 (1): 16780.
TMEM79/MATTRIN defines a pathway for Frizzled regulation and is required for Xenopus embryogenesis. , Chen M, Amado N, Tan J, Reis A, Ge M, Abreu JG , He X ., Elife. September 14, 2020; 9
Natural size variation among embryos leads to the corresponding scaling in gene expression. , Leibovich A, Edri T, Klein SL, Moody SA , Fainsod A ., Dev Biol. June 15, 2020; 462 (2): 165-179.
The tumor suppressor PTPRK promotes ZNRF3 internalization and is required for Wnt inhibition in the Spemann organizer. , Chang LS, Kim M , Glinka A , Reinhard C, Niehrs C ., Elife. January 14, 2020; 9
Modeling Bainbridge-Ropers Syndrome in Xenopus laevis Embryos. , Lichtig H, Artamonov A, Polevoy H, Reid CD, Bielas SL, Frank D ., Front Physiol. January 1, 2020; 11 75.
Pinhead signaling regulates mesoderm heterogeneity via FGF receptor-dependent pathway. , Ossipova O, Itoh K, Radu A, Ezan J, Sokol SY ., Development. January 1, 2020;
Nucleotide receptor P2RY4 is required for head formation via induction and maintenance of head organizer in Xenopus laevis. , Harata A, Hirakawa M, Sakuma T, Yamamoto T , Hashimoto C., Dev Growth Differ. February 1, 2019; 61 (2): 186-197.
Notch1 is asymmetrically distributed from the beginning of embryogenesis and controls the ventral center. , Castro Colabianchi AM, Revinski DR, Encinas PI, Baez MV, Monti RJ, Rodríguez Abinal M, Kodjabachian L , Franchini LF, López SL ., Development. July 17, 2018; 145 (14):
Transcriptomics of dorso- ventral axis determination in Xenopus tropicalis. , Monteiro RS , Gentsch GE , Smith JC ., Dev Biol. July 15, 2018; 439 (2): 69-79.
Transcriptomics of dorso- ventral axis determination in Xenopus tropicalis. , Monteiro RS , Gentsch GE , Smith JC ., Dev Biol. July 15, 2018; 439 (2): 69-79.
Retinoic acid-induced expression of Hnf1b and Fzd4 is required for pancreas development in Xenopus laevis. , Gere-Becker MB, Pommerenke C, Lingner T, Pieler T ., Development. June 8, 2018; 145 (12):
RAPGEF5 Regulates Nuclear Translocation of β-Catenin. , Griffin JN, Del Viso F, Duncan AR, Robson A, Hwang W, Kulkarni S , Liu KJ , Liu KJ , Khokha MK ., Dev Cell. January 22, 2018; 44 (2): 248-260.e4.
ADMP controls the size of Spemann's organizer through a network of self-regulating expansion-restriction signals. , Leibovich A, Kot-Leibovich H, Ben-Zvi D, Fainsod A ., BMC Biol. January 22, 2018; 16 (1): 13.
Xenbase: a genomic, epigenomic and transcriptomic model organism database. , Karimi K , Fortriede JD , Lotay VS , Burns KA , Wang DZ , Fisher ME , Fisher ME , Pells TJ , James-Zorn C , Wang Y, Ponferrada VG , Chu S , Chaturvedi P , Zorn AM , Vize PD ., Nucleic Acids Res. January 4, 2018; 46 (D1): D861-D868.
Xenopus laevis as a Model Organism for the Study of Spinal Cord Formation, Development, Function and Regeneration. , Borodinsky LN ., Front Neural Circuits. November 23, 2017; 11 90.
Angiopoietin-like 4 Is a Wnt Signaling Antagonist that Promotes LRP6 Turnover. , Kirsch N, Chang LS, Koch S, Glinka A , Dolde C, Colozza G , Benitez MDJ, De Robertis EM , Niehrs C ., Dev Cell. October 9, 2017; 43 (1): 71-82.e6.
Nodal/Activin Pathway is a Conserved Neural Induction Signal in Chordates. , Le Petillon Y, Luxardi G , Scerbo P , Cibois M, Leon A, Subirana L, Irimia M, Kodjabachian L , Escriva H, Bertrand S., Nat Ecol Evol. August 1, 2017; 1 (8): 1192-1200.
Genome-wide analysis of dorsal and ventral transcriptomes of the Xenopus laevis gastrula. , Ding Y , Colozza G , Zhang K, Moriyama Y , Ploper D, Sosa EA, Benitez MDJ, De Robertis EM ., Dev Biol. June 15, 2017; 426 (2): 176-187.
Noggin is required for first pharyngeal arch differentiation in the frog Xenopus tropicalis. , Young JJ , Kjolby RAS, Wu G, Wong D, Hsu SW, Harland RM ., Dev Biol. June 15, 2017; 426 (2): 245-254.
A catalog of Xenopus tropicalis transcription factors and their regional expression in the early gastrula stage embryo. , Blitz IL , Paraiso KD , Patrushev I , Chiu WTY , Cho KWY , Gilchrist MJ ., Dev Biol. June 15, 2017; 426 (2): 409-417.
Identification and comparative analyses of Siamois cluster genes in Xenopus laevis and tropicalis. , Haramoto Y , Saijyo T, Tanaka T, Furuno N , Suzuki A , Ito Y , Kondo M, Taira M , Takahashi S ., Dev Biol. June 15, 2017; 426 (2): 374-383.
Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula transition. , Wagner G, Singhal N, Nicetto D, Straub T, Kremmer E, Rupp RAW ., PLoS Genet. May 12, 2017; 13 (5): e1006757.
Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula transition. , Wagner G, Singhal N, Nicetto D, Straub T, Kremmer E, Rupp RAW ., PLoS Genet. May 12, 2017; 13 (5): e1006757.
Spemann organizer transcriptome induction by early beta-catenin, Wnt, Nodal, and Siamois signals in Xenopus laevis. , Ding Y , Ploper D, Sosa EA, Colozza G , Moriyama Y , Benitez MD, Zhang K, Merkurjev D, De Robertis EM ., Proc Natl Acad Sci U S A. April 11, 2017; 114 (15): E3081-E3090.
Scaling of pattern formations and morphogen gradients. , Inomata H ., Dev Growth Differ. January 1, 2017; 59 (1): 41-51.
FoxD1 protein interacts with Wnt and BMP signaling to differentially pattern mesoderm and neural tissue. , Polevoy H, Malyarova A, Fonar Y, Elias S, Frank D ., Int J Dev Biol. January 1, 2017; 61 (3-4-5): 293-302.
Tissue- and stage-specific Wnt target gene expression is controlled subsequent to β-catenin recruitment to cis-regulatory modules. , Nakamura Y, de Paiva Alves E, Veenstra GJ , Hoppler S ., Development. June 1, 2016; 143 (11): 1914-25.
Specification of anteroposterior axis by combinatorial signaling during Xenopus development. , Carron C, Shi DL ., Wiley Interdiscip Rev Dev Biol. January 1, 2016; 5 (2): 150-68.
Notum is required for neural and head induction via Wnt deacylation, oxidation, and inactivation. , Zhang X, Cheong SM, Amado NG, Reis AH, MacDonald BT, Zebisch M, Jones EY, Abreu JG , He X ., Dev Cell. March 23, 2015; 32 (6): 719-30.
Regulation of nuclear-cytoplasmic shuttling and function of Family with sequence similarity 13, member A ( Fam13a), by B56-containing PP2As and Akt. , Jin Z, Chung JW, Mei W, Strack S, He C, Lau GW, Yang J ., Mol Biol Cell. March 15, 2015; 26 (6): 1160-73.
Direct regulation of siamois by VegT is required for axis formation in Xenopus embryo. , Li HY, El Yakoubi W, Shi DL ., Int J Dev Biol. January 1, 2015; 59 (10-12): 443-51.
PV.1 induced by FGF- Xbra functions as a repressor of neurogenesis in Xenopus embryos. , Yoon J, Kim JH , Lee SY, Kim S, Park JB , Lee JY , Kim J ., BMB Rep. December 1, 2014; 47 (12): 673-8.
The splicing factor PQBP1 regulates mesodermal and neural development through FGF signaling. , Iwasaki Y , Thomsen GH ., Development. October 1, 2014; 141 (19): 3740-51.
Occupancy of tissue-specific cis-regulatory modules by Otx2 and TLE/Groucho for embryonic head specification. , Yasuoka Y , Suzuki Y, Takahashi S , Someya H, Sudou N , Haramoto Y , Cho KW , Asashima M , Sugano S, Taira M ., Nat Commun. July 9, 2014; 5 4322.
FoxA4 favours notochord formation by inhibiting contiguous mesodermal fates and restricts anterior neural development in Xenopus embryos. , Murgan S, Castro Colabianchi AM, Monti RJ, Boyadjián López LE, Aguirre CE, Stivala EG, Carrasco AE , López SL ., PLoS One. January 1, 2014; 9 (10): e110559.
The Xenopus homologue of Down syndrome critical region protein 6 drives dorsoanterior gene expression and embryonic axis formation by antagonising polycomb group proteins. , Li HY, Grifone R, Saquet A, Carron C, Shi DL ., Development. December 1, 2013; 140 (24): 4903-13.
Developmental mechanisms directing early anterior forebrain specification in vertebrates. , Andoniadou CL, Martinez-Barbera JP., Cell Mol Life Sci. October 1, 2013; 70 (20): 3739-52.