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Summary Expression Phenotypes Gene Literature (544) GO Terms (6) Nucleotides (117) Proteins (46) Interactants (1444) Wiki
XB--487723

Papers associated with nog (and chrd)



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The Molecular Mechanism of Body Axis Induction in Lampreys May Differ from That in Amphibians., Ermakova GV, Kucheryavyy AV, Zaraisky AG, Bayramov AV., Int J Mol Sci. February 19, 2024; 25 (4):         

The early dorsal signal in vertebrate embryos requires endolysosomal membrane trafficking., Azbazdar Y, De Robertis EM., Bioessays. January 1, 2024; 46 (1): e2300179.                            

The role of Wnt signaling in Xenopus neural induction., Velloso I, Han W, He X, Abreu JG., Curr Top Dev Biol. January 1, 2023; 153 229-254.

Normal Table of Xenopus development: a new graphical resource., Zahn N, James-Zorn C, Ponferrada VG, Adams DS, Grzymkowski J, Buchholz DR, Nascone-Yoder NM, Horb M, Moody SA, Vize PD, Zorn AM., Development. July 15, 2022; 149 (14):                         

Evo-Devo of Urbilateria and its larval forms., De Robertis EM, Tejeda-Muñoz N., Dev Biol. July 1, 2022; 487 10-20.        

ccr7 affects both morphogenesis and differentiation during early Xenopus embryogenesis., Goto T, Michiue T, Shibuya H., Dev Growth Differ. June 1, 2022; 64 (5): 254-260.        

Transmembrane H+ fluxes and the regulation of neural induction in Xenopus laevis., Leung HC, Leclerc C, Moreau M, Shipley AM, Miller AL, Miller AL, Webb SE., Zygote. April 1, 2022; 30 (2): 267-278.        

Targeted search for scaling genes reveals matrixmetalloproteinase 3 as a scaler of the dorsal-ventral pattern in Xenopus laevis embryos., Orlov EE, Nesterenko AM, Korotkova DD, Parshina EA, Martynova NY, Zaraisky AG., Dev Cell. January 10, 2022; 57 (1): 95-111.e12.                                

Goosecoid Controls Neuroectoderm Specification via Dual Circuits of Direct Repression and Indirect Stimulation in Xenopus Embryos., Umair Z, Kumar V, Goutam RS, Kumar S, Kumar S, Lee U, Kim J., Mol Cells. October 31, 2021; 44 (10): 723-735.          

Rab7 is required for mesoderm patterning and gastrulation in Xenopus., Kreis J, Wielath FM, Vick P., Biol Open. July 15, 2021; 10 (7):                                           

Smad2 and Smad3 differentially modulate chordin transcription via direct binding on the distal elements in gastrula Xenopus embryos., Kumar V, Umair Z, Kumar S, Kumar S, Lee U, Kim J., Biochem Biophys Res Commun. June 25, 2021; 559 168-175.          

Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates., Bright AR, van Genesen S, Li Q, Grasso A, Frölich S, van der Sande M, van Heeringen SJ, Veenstra GJC., EMBO J. May 3, 2021; 40 (9): e104913.                        

A temporally resolved transcriptome for developing "Keller" explants of the Xenopus laevis dorsal marginal zone., Kakebeen AD, Huebner RJ, Shindo A, Kwon K, Kwon T, Wills AE, Wallingford JB., Dev Dyn. May 1, 2021; 250 (5): 717-731.              

Segregation of brain and organizer precursors is differentially regulated by Nodal signaling at blastula stage., Castro Colabianchi AM, Tavella MB, Boyadjián López LE, Rubinstein M, Franchini LF, López SL., Biol Open. February 25, 2021; 10 (2):                 

Dact-4 is a Xenopus laevis Spemann organizer gene related to the Dapper/Frodo antagonist of β-catenin family of proteins., Colozza G, De Robertis EM., Gene Expr Patterns. December 1, 2020; 38 119153.                        

Foxd4l1.1 negatively regulates transcription of neural repressor ventx1.1 during neuroectoderm formation in Xenopus embryos., Kumar S, Kumar S, Umair Z, Kumar V, Kumar S, Lee U, Kim J., Sci Rep. October 8, 2020; 10 (1): 16780.            

TMEM79/MATTRIN defines a pathway for Frizzled regulation and is required for Xenopus embryogenesis., Chen M, Amado N, Tan J, Reis A, Ge M, Abreu JG, He X., Elife. September 14, 2020; 9                                                                                           

Natural size variation among embryos leads to the corresponding scaling in gene expression., Leibovich A, Edri T, Klein SL, Moody SA, Fainsod A., Dev Biol. June 15, 2020; 462 (2): 165-179.                    

The tumor suppressor PTPRK promotes ZNRF3 internalization and is required for Wnt inhibition in the Spemann organizer., Chang LS, Kim M, Glinka A, Reinhard C, Niehrs C., Elife. January 14, 2020; 9                                                                                               

Modeling Bainbridge-Ropers Syndrome in Xenopus laevis Embryos., Lichtig H, Artamonov A, Polevoy H, Reid CD, Bielas SL, Frank D., Front Physiol. January 1, 2020; 11 75.                    

Pinhead signaling regulates mesoderm heterogeneity via FGF receptor-dependent pathway., Ossipova O, Itoh K, Radu A, Ezan J, Sokol SY., Development. January 1, 2020;                                       

Nucleotide receptor P2RY4 is required for head formation via induction and maintenance of head organizer in Xenopus laevis., Harata A, Hirakawa M, Sakuma T, Yamamoto T, Hashimoto C., Dev Growth Differ. February 1, 2019; 61 (2): 186-197.                                

Notch1 is asymmetrically distributed from the beginning of embryogenesis and controls the ventral center., Castro Colabianchi AM, Revinski DR, Encinas PI, Baez MV, Monti RJ, Rodríguez Abinal M, Kodjabachian L, Franchini LF, López SL., Development. July 17, 2018; 145 (14):                           

Transcriptomics of dorso-ventral axis determination in Xenopus tropicalis., Monteiro RS, Gentsch GE, Smith JC., Dev Biol. July 15, 2018; 439 (2): 69-79.                                    

Transcriptomics of dorso-ventral axis determination in Xenopus tropicalis., Monteiro RS, Gentsch GE, Smith JC., Dev Biol. July 15, 2018; 439 (2): 69-79.                                    

Retinoic acid-induced expression of Hnf1b and Fzd4 is required for pancreas development in Xenopus laevis., Gere-Becker MB, Pommerenke C, Lingner T, Pieler T., Development. June 8, 2018; 145 (12):                                   

RAPGEF5 Regulates Nuclear Translocation of β-Catenin., Griffin JN, Del Viso F, Duncan AR, Robson A, Hwang W, Kulkarni S, Liu KJ, Liu KJ, Khokha MK., Dev Cell. January 22, 2018; 44 (2): 248-260.e4.                                                

ADMP controls the size of Spemann's organizer through a network of self-regulating expansion-restriction signals., Leibovich A, Kot-Leibovich H, Ben-Zvi D, Fainsod A., BMC Biol. January 22, 2018; 16 (1): 13.                

Xenbase: a genomic, epigenomic and transcriptomic model organism database., Karimi K, Fortriede JD, Lotay VS, Burns KA, Wang DZ, Fisher ME, Fisher ME, Pells TJ, James-Zorn C, Wang Y, Ponferrada VG, Chu S, Chaturvedi P, Zorn AM, Vize PD., Nucleic Acids Res. January 4, 2018; 46 (D1): D861-D868.        

Xenopus laevis as a Model Organism for the Study of Spinal Cord Formation, Development, Function and Regeneration., Borodinsky LN., Front Neural Circuits. November 23, 2017; 11 90.  

Angiopoietin-like 4 Is a Wnt Signaling Antagonist that Promotes LRP6 Turnover., Kirsch N, Chang LS, Koch S, Glinka A, Dolde C, Colozza G, Benitez MDJ, De Robertis EM, Niehrs C., Dev Cell. October 9, 2017; 43 (1): 71-82.e6.                                

Nodal/Activin Pathway is a Conserved Neural Induction Signal in Chordates., Le Petillon Y, Luxardi G, Scerbo P, Cibois M, Leon A, Subirana L, Irimia M, Kodjabachian L, Escriva H, Bertrand S., Nat Ecol Evol. August 1, 2017; 1 (8): 1192-1200.                                

Genome-wide analysis of dorsal and ventral transcriptomes of the Xenopus laevis gastrula., Ding Y, Colozza G, Zhang K, Moriyama Y, Ploper D, Sosa EA, Benitez MDJ, De Robertis EM., Dev Biol. June 15, 2017; 426 (2): 176-187.                                  

Noggin is required for first pharyngeal arch differentiation in the frog Xenopus tropicalis., Young JJ, Kjolby RAS, Wu G, Wong D, Hsu SW, Harland RM., Dev Biol. June 15, 2017; 426 (2): 245-254.                

A catalog of Xenopus tropicalis transcription factors and their regional expression in the early gastrula stage embryo., Blitz IL, Paraiso KD, Patrushev I, Chiu WTY, Cho KWY, Gilchrist MJ., Dev Biol. June 15, 2017; 426 (2): 409-417.        

Identification and comparative analyses of Siamois cluster genes in Xenopus laevis and tropicalis., Haramoto Y, Saijyo T, Tanaka T, Furuno N, Suzuki A, Ito Y, Kondo M, Taira M, Takahashi S., Dev Biol. June 15, 2017; 426 (2): 374-383.                  

Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula transition., Wagner G, Singhal N, Nicetto D, Straub T, Kremmer E, Rupp RAW., PLoS Genet. May 12, 2017; 13 (5): e1006757.                                    

Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula transition., Wagner G, Singhal N, Nicetto D, Straub T, Kremmer E, Rupp RAW., PLoS Genet. May 12, 2017; 13 (5): e1006757.                                    

Spemann organizer transcriptome induction by early beta-catenin, Wnt, Nodal, and Siamois signals in Xenopus laevis., Ding Y, Ploper D, Sosa EA, Colozza G, Moriyama Y, Benitez MD, Zhang K, Merkurjev D, De Robertis EM., Proc Natl Acad Sci U S A. April 11, 2017; 114 (15): E3081-E3090.                        

Scaling of pattern formations and morphogen gradients., Inomata H., Dev Growth Differ. January 1, 2017; 59 (1): 41-51.

FoxD1 protein interacts with Wnt and BMP signaling to differentially pattern mesoderm and neural tissue., Polevoy H, Malyarova A, Fonar Y, Elias S, Frank D., Int J Dev Biol. January 1, 2017; 61 (3-4-5): 293-302.              

Tissue- and stage-specific Wnt target gene expression is controlled subsequent to β-catenin recruitment to cis-regulatory modules., Nakamura Y, de Paiva Alves E, Veenstra GJ, Hoppler S., Development. June 1, 2016; 143 (11): 1914-25.            

Specification of anteroposterior axis by combinatorial signaling during Xenopus development., Carron C, Shi DL., Wiley Interdiscip Rev Dev Biol. January 1, 2016; 5 (2): 150-68.            

Notum is required for neural and head induction via Wnt deacylation, oxidation, and inactivation., Zhang X, Cheong SM, Amado NG, Reis AH, MacDonald BT, Zebisch M, Jones EY, Abreu JG, He X., Dev Cell. March 23, 2015; 32 (6): 719-30.                                  

Regulation of nuclear-cytoplasmic shuttling and function of Family with sequence similarity 13, member A (Fam13a), by B56-containing PP2As and Akt., Jin Z, Chung JW, Mei W, Strack S, He C, Lau GW, Yang J., Mol Biol Cell. March 15, 2015; 26 (6): 1160-73.                  

Direct regulation of siamois by VegT is required for axis formation in Xenopus embryo., Li HY, El Yakoubi W, Shi DL., Int J Dev Biol. January 1, 2015; 59 (10-12): 443-51.                          

PV.1 induced by FGF-Xbra functions as a repressor of neurogenesis in Xenopus embryos., Yoon J, Kim JH, Lee SY, Kim S, Park JB, Lee JY, Kim J., BMB Rep. December 1, 2014; 47 (12): 673-8.        

The splicing factor PQBP1 regulates mesodermal and neural development through FGF signaling., Iwasaki Y, Thomsen GH., Development. October 1, 2014; 141 (19): 3740-51.                                          

Occupancy of tissue-specific cis-regulatory modules by Otx2 and TLE/Groucho for embryonic head specification., Yasuoka Y, Suzuki Y, Takahashi S, Someya H, Sudou N, Haramoto Y, Cho KW, Asashima M, Sugano S, Taira M., Nat Commun. July 9, 2014; 5 4322.        

FoxA4 favours notochord formation by inhibiting contiguous mesodermal fates and restricts anterior neural development in Xenopus embryos., Murgan S, Castro Colabianchi AM, Monti RJ, Boyadjián López LE, Aguirre CE, Stivala EG, Carrasco AE, López SL., PLoS One. January 1, 2014; 9 (10): e110559.                              

The Xenopus homologue of Down syndrome critical region protein 6 drives dorsoanterior gene expression and embryonic axis formation by antagonising polycomb group proteins., Li HY, Grifone R, Saquet A, Carron C, Shi DL., Development. December 1, 2013; 140 (24): 4903-13.                                

Developmental mechanisms directing early anterior forebrain specification in vertebrates., Andoniadou CL, Martinez-Barbera JP., Cell Mol Life Sci. October 1, 2013; 70 (20): 3739-52.        

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