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Summary Expression Phenotypes Gene Literature (15) GO Terms (9) Nucleotides (258) Proteins (43) Interactants (130) Wiki
XB-GENEPAGE-6258021

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for upf1 - All

Models - Gene (26)
Models - mRNA (30)
mRNAs (6)
ESTs (137)

Models - Gene (26)

Source Version Model Species
NCBI 10.0 XBXT10g013158 X. tropicalis
NCBI 10.1 XBXL10_1g4368 X. laevis.S
NCBI 10.1 XBXL10_1g1525 X. laevis.L
ENSEMBL 10.0 upf1 X. tropicalis
JGI 9.1 Xelaev18009735m.g X. laevis.S
JGI 9.1 Xelaev18006197m.g X. laevis.L
Xenbase 9.1 gene515 X. tropicalis
Xenbase 9.2 gene12327 X. laevis.S
Xenbase 9.2 gene19932 X. laevis.L
ENSEMBL 9.1 upf1 X. tropicalis
JGI 8.0 Xetrov14003510m.g X. tropicalis
JGI 7.1 Xetro.A02320 X. tropicalis
JGI 7.2 Xelaev16061757m.g X. laevis.S
JGI 6.0 XeXenL6RMv10004587m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000013602 X. tropicalis
JGI 4.1 e_gw1.410.14.1 X. tropicalis
JGI 4.1 e_gw1.410.68.1 X. tropicalis
JGI 4.1 e_gw1.410.81.1 X. tropicalis
JGI 4.1 gw1.410.14.1 X. tropicalis
JGI 4.1 gw1.410.68.1 X. tropicalis
JGI 4.1 gw1.410.81.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4100014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4100068 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4100081 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4100010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_410000010 X. tropicalis

Models - mRNA (30)

Source Version Model Species
NCBI 10.0 mRNA065111 X. tropicalis
NCBI 10.1 XBmRNA2698 X. laevis.L
NCBI 10.1 XBmRNA8123 X. laevis.S
ENSEMBL 10.0 ENSXETT00000061144 X. tropicalis
ENSEMBL 10.0 ENSXETT00000069946 X. tropicalis
JGI 9.1 Xelaev18006197m X. laevis.L
JGI 9.1 Xelaev18009735m X. laevis.S
Xenbase 9.1 rna1596 X. tropicalis
Xenbase 9.2 rna58205 X. laevis.L
Xenbase 9.2 rna35833 X. laevis.S
ENSEMBL 9.1 ENSXETT00000076612 X. tropicalis
ENSEMBL 9.1 ENSXETT00000029819 X. tropicalis
ENSEMBL 9.1 ENSXETT00000061144 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069946 X. tropicalis
JGI 8.0 Xetrov14003510m X. tropicalis
JGI 7.1 Xetro.A02320.1 X. tropicalis
JGI 7.2 Xelaev16061757m X. laevis.S
JGI 6.0 XeXenL6RMv10004587m X. laevis.S
JGI 4.1 ENSXETT00000029819 X. tropicalis
JGI 4.1 e_gw1.410.14.1 X. tropicalis
JGI 4.1 e_gw1.410.68.1 X. tropicalis
JGI 4.1 e_gw1.410.81.1 X. tropicalis
JGI 4.1 gw1.410.14.1 X. tropicalis
JGI 4.1 gw1.410.68.1 X. tropicalis
JGI 4.1 gw1.410.81.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4100014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4100068 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4100081 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4100010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_410000010 X. tropicalis

mRNAs (6)

Clone Accession Species Library Anatomy Stage
IMAGE:7684219 BC125694 X. tropicalis
IMAGE:7865044 BC157561 X. tropicalis
XM_002938826 X. tropicalis
IMAGE:5516183 BC073441 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001092393 X. laevis.S
XM_018254615 X. laevis.L

ESTs (137)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8919481 EL833287 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8915791 EL828652 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8868293 EL707902 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8958151 EL660425 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8957758 EL654796 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
st30g07 DC172077 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st29g07 DC171494 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st25f12 DC170330 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT3702 CX399235 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT13121 CX321277 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO6916 CX940045 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7625065 CX402900 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620706 CX341072 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7593344 CX327322 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7611263 CX378108 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7541342 CX448137 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7853192 DT394211 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7537339 CX445698 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7535235 CX476072 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7711748 CX968583 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7805553 DR841665 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7738587 DN026508 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7737531 DN025061 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7718894 CX981774 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7695155 CX923209 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687972 CX910837 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7532998 CX434452 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA022h04 CR587469 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA024b07 CR567439 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA008g15 CR562421 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA003m22 CR561839 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr29B22 CN106568 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA020p12 BX731274 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA057e10 BX718113 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas040b06 AL651333 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu110k13 AL798799 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu122d21 AL792618 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu144p12 AL790022 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu113e06 AL787643 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu049b07 AL662193 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu043n02 AL658383 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu029i06 AL650518 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5307540 BQ388992 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8915791 EL828653 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8925967 EL672087 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8868293 EL707901 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
rst30g07 DC141773 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst29g07 DC141328 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT3702 CX399234 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT13121 CX321276 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO6916 CX940044 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7853192 DT394210 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7687972 CX910836 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7805553 DR841664 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7738587 DN026507 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7718894 CX981773 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7711748 CX968582 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7695155 CX923208 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7535235 CX476071 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541342 CX448136 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537339 CX445697 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532998 CX434451 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7625065 CX402899 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7611263 CX378107 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620706 CX341071 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7593344 CX327321 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA022h04 CR587470 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr29B22 CN106567 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas137n04 BX757628 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu122d21 BX702339 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu113g08 BX701157 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu110k13 BX694634 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5307540 BQ388991 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
xl303j02 DC124106 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl274g24 DC115960 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk141n23ex DC049094 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8822175 EG574390 5' X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8538068 EB467579 5' X. laevis.S NICHD_XGC_olfb brain unspecified stage
IMAGE:7980487 DR715019 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL426d05ex BP677220 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL406c14ex BP692975 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL429c23ex BP678220 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL217i15 BJ627265 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL205j22 BJ623690 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL197p01 BJ621574 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL189e21 BJ619456 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL152i05 BJ096054 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL150h17 BJ095531 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL065o22 BJ060490 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL105f08 BJ067956 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL063d08 BJ059626 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL084o10 BJ066019 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL068d02 BJ062500 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL066n21 BJ060800 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL036f22 BJ036435 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL030l22 BJ034748 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL032i18 BJ042701 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL035g19 BJ042353 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:5514582 CF287343 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5516183 CF286466 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6862616 CA986357 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6325089 CA973056 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6323954 CA972275 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6634029 BU908546 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6630617 BU905717 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3517191 BG346809 5' X. laevis.S Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
IMAGE:3745237 BE680199 5' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:3745333 BE679782 5' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
PBX0120D07 AW642683 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0108C12 AW641612 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0071C07 AW638541 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0071A11 AW638527 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XENOPUS_SOURCE_ID:xlnoc002b19 AW199550 5' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
rxl248i23 DC073817 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl303j02 DC089225 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl274g24 DC081032 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk141n23ex DC015821 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8822175 EG571965 3' X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
XL217i15 BJ643577 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL190d24 BJ636346 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL189e21 BJ636094 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL152i05 BJ100381 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL150h17 BJ099393 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL053e16 BJ086512 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL105f08 BJ085254 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL084o10 BJ083344 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL068d02 BJ080543 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL066n21 BJ079015 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL065o22 BJ078706 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL063d08 BJ078141 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL036f22 BJ051652 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL032i18 BJ056653 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL035g19 BJ056312 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:4783738 BM191891 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3745237 BE678761 3' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
PBX0004H06 AW633203 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage