Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (1) Nucleotides (207) Proteins (42) Interactants (62) Wiki
XB-GENEPAGE-1006786

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for trim8 - All

Models - Gene (22)
Models - mRNA (24)
mRNAs (12)
ESTs (102)

Models - Gene (22)

Source Version Model Species
NCBI 10.0 XBXT10g007312 X. tropicalis
NCBI 10.1 XBXL10_1g30388 X. laevis.L
NCBI 10.1 XBXL10_1g32633 X. laevis.S
ENSEMBL 10.0 trim8 X. tropicalis
Xenbase 9.1 gene7413 X. tropicalis
Xenbase 9.2 gene50626 X. laevis.L
ENSEMBL 9.1 fibin X. tropicalis
JGI 8.0 Xetrov14029020m.g X. tropicalis
JGI 7.1 Xetro.G00510 X. tropicalis
JGI 7.2 Xelaev16026862m.g X. laevis.L
JGI 6.0 XeXenL6RMv10026274m.g X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_4010021 X. tropicalis
JGI 4.1 e_gw1.401.28.1 X. tropicalis
JGI 4.1 e_gw1.401.35.1 X. tropicalis
JGI 4.1 e_gw1.401.65.1 X. tropicalis
JGI 4.1 gw1.401.28.1 X. tropicalis
JGI 4.1 gw1.401.35.1 X. tropicalis
JGI 4.1 gw1.401.65.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4010013 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4010005 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_401000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_401000021 X. tropicalis

Models - mRNA (24)

Source Version Model Species
NCBI 10.0 mRNA036259 X. tropicalis
NCBI 10.1 XBmRNA57245 X. laevis.L
NCBI 10.1 XBmRNA61614 X. laevis.S
ENSEMBL 10.0 ENSXETT00000063043 X. tropicalis
ENSEMBL 10.0 ENSXETT00000066525 X. tropicalis
Xenbase 9.1 rna23914 X. tropicalis
Xenbase 9.2 rna97221 X. laevis.L
ENSEMBL 9.1 ENSXETT00000063043 X. tropicalis
ENSEMBL 9.1 ENSXETT00000066525 X. tropicalis
JGI 8.0 Xetrov14029020m X. tropicalis
JGI 7.1 Xetro.G00510.1 X. tropicalis
JGI 7.2 Xelaev16026862m X. laevis.L
JGI 6.0 XeXenL6RMv10026274m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_4010021 X. tropicalis
JGI 4.1 e_gw1.401.28.1 X. tropicalis
JGI 4.1 e_gw1.401.35.1 X. tropicalis
JGI 4.1 e_gw1.401.65.1 X. tropicalis
JGI 4.1 gw1.401.28.1 X. tropicalis
JGI 4.1 gw1.401.35.1 X. tropicalis
JGI 4.1 gw1.401.65.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4010013 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4010005 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_401000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_401000021 X. tropicalis

mRNAs (12)

Clone Accession Species Library Anatomy Stage
NM_001032341 X. tropicalis
IMAGE:7022708 BC098511 X. tropicalis
XM_012966677 X. tropicalis
IMAGE:8332505 BC126038 X. laevis.L
IMAGE:8547018 BC154976 X. laevis.L
NM_001112836 X. laevis.L
XM_018227443 X. laevis.S
XM_018227443 X. laevis.S
XM_018227442 X. laevis.S
XM_018227442 X. laevis.S
XM_018241674 X. laevis.L
XM_018241673 X. laevis.L

ESTs (102)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8858369 EL822206 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8956161 EL655139 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
xtbs14B09 CN078146 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:8950053 EG653689 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:7553686 CX492409 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7547393 CX500913 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544968 CX487018 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7542008 CX448767 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7571569 CX512339 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7802038 DR836191 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7754364 DN056024 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7703579 CX939575 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7698102 CX930146 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7674689 CX885037 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7529855 CX426785 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA047f05 CR577001 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA008a19 CR448404 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA054n13 CR438134 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA004o13 CR408195 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr28K04 CN105853 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr21C04 CN103459 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr12D08 CN097285 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas094k20 AL968349 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas011a17 AL629126 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas002k20 AL595149 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA054o24 BX724081 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA078o09 BX722146 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA027o10 BX716050 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA020k06 BX712270 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu067h04 AL804955 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu143c06 AL798348 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas065a10 AL674848 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6979925 CF148982 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:8858369 EL822207 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
xtbs14B09 CN078145 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7802038 DR836190 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7754364 DN056023 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7703579 CX939574 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7571569 CX512338 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7547393 CX500912 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553686 CX492408 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544968 CX487017 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7542008 CX448766 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA047f05 CR577002 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA008a19 CR448405 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA054n13 CR438135 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA004o13 CR408196 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr28K04 CN105852 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr21C04 CN103458 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr12D08 CN097284 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA054o24 BX724082 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA078o09 BX722147 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA027o10 BX716051 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA020k06 BX712271 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu067h04 BX690922 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xl224c20 DC100872 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl254i03 DC110125 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:8641570 EB737762 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
IMAGE:7980364 DR715449 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL406f05ex BP693029 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL434k02ex BP680368 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL424m16ex BP677082 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998B078637 BX853437 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
XL213k24 BJ626095 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL192k13 BJ620344 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL094b17 BJ071347 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL074l24 BJ062018 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL078h24 BJ064144 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL076e24 BJ063441 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL073e08 BJ061528 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL005i02 BJ030907 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:4203001 BG552762 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3517742 BG348137 5' X. laevis.L Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
IMAGE:3750557 BG038116 5' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
IMAGE:3548454 BF615811 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:3744578 BF427890 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3746347 BF427257 5' X. laevis.L Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:3744349 BF426228 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3745310 BE680242 5' X. laevis.L Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
PBX0121D06 AW642774 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0105E10 AW641360 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0091B05 AW640081 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0091A03 AW640069 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0075E11 AW638865 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XENOPUS_SOURCE_ID:xlnoc002o23 AW199874 5' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
zb05b03 AW159641 5' X. laevis.L Xenopus EST library brain NF stage 45 to NF stage 66
rxl283b06 DC083690 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl282b06 DC083402 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl340f03 DC098886 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl238e18 DC070931 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl254i03 DC075486 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:7980364 DR715490 3' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL406f05ex BP727283 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL434k02ex BP717031 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL192k13 BJ636973 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL094b17 BJ091095 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL074l24 BJ080176 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL005i02 BJ045859 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3744349 BG161839 3' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage