Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (3) GO Terms (18) Nucleotides (196) Proteins (71) Interactants (22) Wiki
XB-GENEPAGE-1011882

Show:     All X. tropicalis X. laevis

Nucleotide sequences for rnaseh1 - All

RefSeq mRNAs(9)
Models - Gene (41)
Models - mRNA (53)
mRNAs (13)
ESTs (20)

RefSeq mRNAs (9)

Accession Version Protein Name Length Protein Species
NM_001102829 NM_001102829.1 ribonuclease H1 1353 bp NP_001096299 X. tropicalis
XM_012962617 XM_012962617.3 ribonuclease H1 isoform X1 1484 bp XP_012818071 X. tropicalis
NM_001096586 NM_001096586.1 ribonuclease H1 L homeolog 1145 bp NP_001090055 X. laevis.L
XM_018262143 XM_018262143.2 ribonuclease H1 L homeolog isoform X1 1312 bp XP_018117632 X. laevis.L
XM_018262144 XM_018262144.2 ribonuclease H1 L homeolog isoform X1 1286 bp XP_018117633 X. laevis.L
NM_001091215 NM_001091215.1 ribonuclease H1 S homeolog 1129 bp NP_001084684 X. laevis.S
XM_018264334 XM_018264334.2 ribonuclease H1 S homeolog isoform X1 1461 bp XP_018119823 X. laevis.S
XM_041563975 XM_041563975.1 XP_041419909.1 ribonuclease H1 S homeolog isoform X1 1532 bp XP_041419909 X. laevis.S
XM_041563976 XM_041563976.1 XP_041419910.1 ribonuclease H1 S homeolog isoform X2 1367 bp XP_041419910 X. laevis.S

Models - Gene (41)

Source Version Model Species
NCBI 10.1 XBXL10_1g26148 X. laevis.S
NCBI 10.1 XBXL10_1g24357 X. laevis.L
NCBI 10.0 XBXT10g027187 X. tropicalis
ENSEMBL 10.0 rnaseh1 X. tropicalis
Xenbase 9.2 gene46536 X. laevis.L
Xenbase 9.2 gene35499 X. laevis.S
Xenbase 9.1 gene26344 X. tropicalis
ENSEMBL 9.1 lrrc1 X. tropicalis
JGI 7.2 Xelaev16012740m.g X. laevis.L
JGI 7.2 Xelaev16052821m.g X. laevis.S
JGI 6.0 XeXenL6RMv10005467m.g X. laevis.L
JGI 6.0 XeXenL6RMv10035252m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000001212 X. tropicalis
JGI 4.1 gw1.125.84.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1250022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250083 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250084 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250101 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250102 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1250009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1250052 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1250053 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1250010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_125000053 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_125000054 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_125000011 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_125000009 X. tropicalis
JGI 4.1 C_scaffold_125000012 X. tropicalis
JGI 4.1 gw1.125.101.1 X. tropicalis
JGI 4.1 gw1.125.102.1 X. tropicalis
JGI 4.1 gw1.125.11.1 X. tropicalis
JGI 4.1 gw1.125.83.1 X. tropicalis
JGI 4.1 gw1.125.9.1 X. tropicalis
JGI 4.1 e_gw1.125.101.1 X. tropicalis
JGI 4.1 e_gw1.125.102.1 X. tropicalis
JGI 4.1 e_gw1.125.11.1 X. tropicalis
JGI 4.1 e_gw1.125.83.1 X. tropicalis
JGI 4.1 e_gw1.125.84.1 X. tropicalis
JGI 4.1 e_gw1.125.9.1 X. tropicalis

mRNAs based on gene models(53)

Source Version Model Species
NCBI 10.1 XBmRNA45604 X. laevis.L
NCBI 10.1 XBmRNA48921 X. laevis.S
NCBI 10.0 mRNA101201 X. tropicalis
ENSEMBL 10.0 ENSXETT00000002605 X. tropicalis
ENSEMBL 10.0 ENSXETT00000061145 X. tropicalis
ENSEMBL 10.0 ENSXETT00000064950 X. tropicalis
ENSEMBL 10.0 ENSXETT00000072508 X. tropicalis
ENSEMBL 10.0 ENSXETT00000075478 X. tropicalis
ENSEMBL 10.0 ENSXETT00000122587 X. tropicalis
ENSEMBL 10.0 ENSXETT00000120384 X. tropicalis
ENSEMBL 10.0 ENSXETT00000112397 X. tropicalis
ENSEMBL 10.0 ENSXETT00000112841 X. tropicalis
ENSEMBL 10.0 ENSXETT00000098557 X. tropicalis
Xenbase 9.2 rna91353 X. laevis.L
Xenbase 9.2 rna75484 X. laevis.S
ENSEMBL 9.1 ENSXETT00000061145 X. tropicalis
Xenbase 9.1 rna51702 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075478 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072508 X. tropicalis
ENSEMBL 9.1 ENSXETT00000064950 X. tropicalis
JGI 7.2 Xelaev16052821m X. laevis.S
JGI 7.2 Xelaev16012740m X. laevis.L
JGI 6.0 XeXenL6RMv10005467m X. laevis.L
JGI 6.0 XeXenL6RMv10035252m X. laevis.S
JGI 4.1 e_gw1.125.83.1 X. tropicalis
JGI 4.1 e_gw1.125.11.1 X. tropicalis
JGI 4.1 e_gw1.125.102.1 X. tropicalis
JGI 4.1 e_gw1.125.101.1 X. tropicalis
JGI 4.1 C_scaffold_125000012 X. tropicalis
ENSEMBL 4.1 ENSXETT00000002605 X. tropicalis
JGI 4.1 gw1.125.9.1 X. tropicalis
JGI 4.1 gw1.125.84.1 X. tropicalis
JGI 4.1 gw1.125.83.1 X. tropicalis
JGI 4.1 gw1.125.11.1 X. tropicalis
JGI 4.1 gw1.125.102.1 X. tropicalis
JGI 4.1 gw1.125.101.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_125000011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_125000054 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_125000053 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_125000009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250102 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250101 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250084 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250083 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1250009 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1250022 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1250010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1250053 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1250052 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1250009 X. tropicalis
JGI 4.1 e_gw1.125.9.1 X. tropicalis
JGI 4.1 e_gw1.125.84.1 X. tropicalis

mRNAs from cDNA libraries (13)

Clone Accession Species Library Anatomy Stage
IMAGE:7624672 BC135622 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TEgg037l20 CT025221 X. tropicalis
NM_001102829 X. tropicalis
XM_012962617 X. tropicalis
IMAGE:3746265 BC097857 X. laevis.L Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
NM_001096586 X. laevis.L
XM_018262143 X. laevis.L
XM_018262144 X. laevis.L
IMAGE:6318531 BC068735 X. laevis.S
NM_001091215 X. laevis.S
XM_018264334 X. laevis.S
XM_041563975 X. laevis.S
XM_041563976 X. laevis.S

ESTs (20)

Clone Accession 5'/3' Species Library Anatomy Stage
xthr18C07 CN100615 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:8853812 EL815697 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
CAAO5074 CX936722 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7624672 CX402527 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7706420 CX958765 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8853812 EL815698 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
CAAO5074 CX936721 3' X. tropicalis NIH_XGC_tropTe5 testis frog
BG409840 BG409840 5' X. laevis.S Stage 10+ Gastrula Library whole organism NF stage 10 to NF stage 10.5
IMAGE:4783016 BM261099 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
BE025810 BE025810 5' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:3437492 BG730187 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
PBX0007D07 AW633412 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0050A05 AW636797 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0140C03 AW644441 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3746265 BF427501 5' X. laevis.L Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
rxl310c17 DC091050 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:4783016 BM261030 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3437492 BG885960 3' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
BE026580 BE026580 3' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:3746265 BG016432 3' X. laevis.L Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)