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Summary Expression Phenotypes Gene Literature (1) GO Terms (21) Nucleotides (134) Proteins (44) Interactants (83) Wiki
XB-GENEPAGE-1013421

Show:     All X. tropicalis X. laevis

Nucleotide sequences for tgm1 - All

RefSeq mRNAs(6)
Models - Gene (29)
Models - mRNA (32)
mRNAs (6)
ESTs (28)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
XM_002939027 XM_002939027.5 protein-glutamine gamma-glutamyltransferase K 4550 bp XP_002939073 X. tropicalis
XM_012971473 XM_012971473.2 protein-glutamine gamma-glutamyltransferase K 4490 bp XP_012826927 X. tropicalis
XM_041564797 XM_041564797.1 XP_041420731.1 protein-glutamine gamma-glutamyltransferase K 4261 bp XP_041420731 X. laevis.L
XM_041564803 XM_041564803.1 XP_041420737.1 protein-glutamine gamma-glutamyltransferase K 4265 bp XP_041420737 X. laevis.L
XM_018241643 XM_018241643.2 protein-glutamine gamma-glutamyltransferase K 2694 bp XP_018097132 X. laevis.S
XM_041580172 XM_041580172.1 XP_041436106.1 protein-glutamine gamma-glutamyltransferase K 2615 bp XP_041436106 X. laevis.S

Models - Gene (29)

Source Version Model Species
NCBI 10.1 XBXL10_1g2193 X. laevis.L
NCBI 10.1 XBXL10_1g4961 X. laevis.S
NCBI 10.0 XBXT10g016463 X. tropicalis
ENSEMBL 10.0 tgm1 X. tropicalis
Xenbase 9.2 gene45048 X. laevis.L
Xenbase 9.2 gene46434 X. laevis.S
JGI 9.1 Xelaev18007006m.g X. laevis.L
JGI 9.1 Xelaev18010207m.g X. laevis.S
Xenbase 9.1 gene2954 X. tropicalis
ENSEMBL 9.1 tgm1 X. tropicalis
JGI 7.1 Xetro.A01568 X. tropicalis
JGI 6.0 XeXenL6RMv10007865m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000014626 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4390015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4390038 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_439000015 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_439000038 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_439000039 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4390081 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4390017 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4390004 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4390025 X. tropicalis
JGI 4.1 gw1.439.84.1 X. tropicalis
JGI 4.1 gw1.439.4.1 X. tropicalis
JGI 4.1 gw1.439.18.1 X. tropicalis
JGI 4.1 e_gw1.439.84.1 X. tropicalis
JGI 4.1 e_gw1.439.4.1 X. tropicalis
JGI 4.1 e_gw1.439.18.1 X. tropicalis
JGI 4.1 C_scaffold_439000010 X. tropicalis

mRNAs based on gene models(32)

Source Version Model Species
NCBI 10.1 XBmRNA9277 X. laevis.S
NCBI 10.1 XBmRNA4052 X. laevis.L
ENSEMBL 10.0 ENSXETT00000032031 X. tropicalis
NCBI 10.0 mRNA081465 X. tropicalis
Xenbase 9.2 rna89232 X. laevis.L
Xenbase 9.2 rna91201 X. laevis.S
ENSEMBL 9.1 ENSXETT00000073284 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073799 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088426 X. tropicalis
ENSEMBL 9.1 ENSXETT00000032031 X. tropicalis
Xenbase 9.1 rna9676 X. tropicalis
JGI 9.1 Xelaev18007006m X. laevis.L
JGI 9.1 Xelaev18010207m X. laevis.S
JGI 7.1 Xetro.A01568.1 X. tropicalis
JGI 6.0 XeXenL6RMv10007865m X. laevis.L
JGI 4.1 gw1.439.4.1 X. tropicalis
JGI 4.1 gw1.439.84.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_439000015 X. tropicalis
JGI 4.1 e_gw1.439.18.1 X. tropicalis
JGI 4.1 e_gw1.439.4.1 X. tropicalis
JGI 4.1 e_gw1.439.84.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000032031 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4390015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4390038 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4390025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4390004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4390017 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4390081 X. tropicalis
JGI 4.1 C_scaffold_439000010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_439000038 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_439000039 X. tropicalis
JGI 4.1 gw1.439.18.1 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
XM_002939027 X. tropicalis
XM_012971473 X. tropicalis
XM_041564797 X. laevis.L
XM_041564803 X. laevis.L
XM_018241643 X. laevis.S
XM_041580172 X. laevis.S

ESTs (28)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu034n08 AL657424 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6977180 CF223890 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:8856673 EL819759 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8854922 EL817372 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8942013 EL633350 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8906642 EL799789 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
TTbA036h13 CR439931 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8961042 EL654590 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
TTpA026p07 BX742819 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7525264 CX442774 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7785566 CX317065 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:6995862 CF238896 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7593441 CX327066 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8856673 EL819760 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:6977180 CF223891 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TTbA036h13 CR439932 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA026p07 BX742820 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7593441 CX327065 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7785566 DR904280 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8906642 EL799790 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8942013 EL633349 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8854922 EL817373 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8528470 EB466071 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:6939877 CB983945 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6935949 CD811243 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6935949 CB984236 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6879270 CB206915 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6879270 CB562786 3' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage