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Summary Expression Phenotypes Gene Literature (1) GO Terms (4) Nucleotides (154) Proteins (65) Interactants (72) Wiki
XB-GENEPAGE-1013820

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for rnf40 - All

Models - Gene (32)
Models - mRNA (41)
mRNAs (13)
ESTs (34)

Models - Gene (32)

Source Version Model Species
NCBI 10.0 XBXT10g000818 X. tropicalis
NCBI 10.1 XBXL10_1g44099 X. laevis.S
NCBI 10.1 XBXL10_1g41493 X. laevis.L
ENSEMBL 10.0 rnf40 X. tropicalis
JGI 9.1 Xelaev18047855m.g X. laevis.S
JGI 9.1 Xelaev18045639m.g X. laevis.L
Xenbase 9.1 gene28720 X. tropicalis
Xenbase 9.2 gene10862 X. laevis.S
Xenbase 9.2 gene7868 X. laevis.L
ENSEMBL 9.1 rnf40 X. tropicalis
JGI 8.0 Xetrov14050823m.g X. tropicalis
JGI 7.1 Xetro.I01636 X. tropicalis
JGI 7.2 Xelaev16006337m.g X. laevis.S
JGI 6.0 XeXenL6RMv10024554m.g X. laevis.S
JGI 6.0 XeXenL6RMv10043689m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000018858 X. tropicalis
JGI 4.1 C_scaffold_645000006 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6450013 X. tropicalis
JGI 4.1 e_gw1.645.21.1 X. tropicalis
JGI 4.1 e_gw1.645.6.1 X. tropicalis
JGI 4.1 e_gw1.645.65.1 X. tropicalis
JGI 4.1 e_gw1.645.81.1 X. tropicalis
JGI 4.1 gw1.645.21.1 X. tropicalis
JGI 4.1 gw1.645.6.1 X. tropicalis
JGI 4.1 gw1.645.65.1 X. tropicalis
JGI 4.1 gw1.645.81.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6450006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6450021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6450065 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6450081 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6450016 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_645000016 X. tropicalis

Models - mRNA (41)

Source Version Model Species
NCBI 10.0 mRNA004084 X. tropicalis
NCBI 10.1 XBmRNA78301 X. laevis.L
NCBI 10.1 XBmRNA82967 X. laevis.S
ENSEMBL 10.0 ENSXETT00000095131 X. tropicalis
JGI 9.1 Xelaev18045639m X. laevis.L
JGI 9.1 Xelaev18047855m X. laevis.S
Xenbase 9.1 rna55569 X. tropicalis
Xenbase 9.2 rna22950 X. laevis.L
Xenbase 9.2 rna31579 X. laevis.S
ENSEMBL 9.1 ENSXETT00000095131 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071537 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077857 X. tropicalis
ENSEMBL 9.1 ENSXETT00000040917 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083001 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072534 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076286 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102168 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071353 X. tropicalis
JGI 8.0 Xetrov14050823m X. tropicalis
JGI 7.1 Xetro.I01636.2 X. tropicalis
JGI 7.1 Xetro.I01636.1 X. tropicalis
JGI 7.2 Xelaev16006337m X. laevis.S
JGI 6.0 XeXenL6RMv10024554m X. laevis.S
JGI 6.0 XeXenL6RMv10043689m X. laevis.S
JGI 4.1 C_scaffold_645000006 X. tropicalis
ENSEMBL 4.1 ENSXETT00000040917 X. tropicalis
JGI 4.1 e_gw1.645.21.1 X. tropicalis
JGI 4.1 e_gw1.645.6.1 X. tropicalis
JGI 4.1 e_gw1.645.65.1 X. tropicalis
JGI 4.1 e_gw1.645.81.1 X. tropicalis
JGI 4.1 gw1.645.21.1 X. tropicalis
JGI 4.1 gw1.645.6.1 X. tropicalis
JGI 4.1 gw1.645.65.1 X. tropicalis
JGI 4.1 gw1.645.81.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6450013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6450006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6450021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6450065 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6450081 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6450016 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_645000016 X. tropicalis

mRNAs (13)

Clone Accession Species Library Anatomy Stage
TEgg014c09 CR762055 X. tropicalis
XM_002940582 X. tropicalis
XM_004918106 X. tropicalis
XM_004918105 X. tropicalis
IMAGE:5542550 BC046690 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4683855 BC042342 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XM_018239370 X. laevis.S
XM_018239369 X. laevis.S
XM_018239368 X. laevis.S
XM_018239367 X. laevis.S
XM_018236712 X. laevis.L
XM_018236710 X. laevis.L
XM_018236709 X. laevis.L

ESTs (34)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7538066 CX447364 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564045 CX474306 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7756254 DN058823 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7707737 CX960348 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7649774 CX810248 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
TTbA078d09 CR435110 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas019i04 AL631686 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu103p22 AL791054 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas055h04 AL672730 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu015d19 AL635849 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas139b08 AL972944 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7707737 CX960347 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7756254 DN058822 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7564045 CX474305 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7538066 CX447363 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas139b08 BX759985 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas055h04 BX747085 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu103p22 BX690646 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xl260c01 DC111780 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL453c11ex BP687078 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL428f04ex BP677935 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL416b03ex BP674204 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL415b03ex BP673872 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998N1610567 BX845526 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL197i12 BJ621463 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL146l04 BJ094811 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:4683855 BQ735610 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3750012 BF614114 5' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
XENOPUS_SOURCE_ID:xlnoc001l09 AW147498 5' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
rxl260c01 DC077064 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL428f04ex BP715001 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL197i12 BJ638188 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL146l04 BJ098463 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3750012 BG038810 3' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5