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Summary Expression Phenotypes Gene Literature (9) GO Terms (13) Nucleotides (118) Proteins (56) Interactants (191) Wiki
XB-GENEPAGE-1033014

Show:     All X. tropicalis X. laevis

Nucleotide sequences for zic4 - All

RefSeq mRNAs(13)
Models - Gene (28)
Models - mRNA (30)
mRNAs (17)
ESTs (21)

RefSeq mRNAs (13)

Accession Version Protein Name Length Protein Species
XM_031902439 XM_031902439.1 XP_031758299.1 zinc finger protein ZIC 4 isoform X1 3173 bp XP_031758299 X. tropicalis
XM_031902440 XM_031902440.1 XP_031758300.1 zinc finger protein ZIC 4 isoform X2 3059 bp XP_031758300 X. tropicalis
XM_031902441 XM_031902441.1 XP_031758301.1 zinc finger protein ZIC 4 isoform X3 2063 bp XP_031758301 X. tropicalis
XM_031902442 XM_031902442.1 XP_031758302.1 zinc finger protein ZIC 4 isoform X3 3689 bp XP_031758302 X. tropicalis
XM_031902443 XM_031902443.1 XP_031758303.1 zinc finger protein ZIC 4 isoform X3 1889 bp XP_031758303 X. tropicalis
NM_001127780 NM_001127780.1 zinc finger protein ZIC 4 2339 bp NP_001121252 X. laevis.L
XM_041562033 XM_041562033.1 XP_041417967.1 zinc finger protein ZIC 4 isoform X1 6521 bp XP_041417967 X. laevis.L
XM_041562034 XM_041562034.1 XP_041417968.1 zinc finger protein ZIC 4 isoform X1 2916 bp XP_041417968 X. laevis.L
XM_041562035 XM_041562035.1 XP_041417969.1 zinc finger protein ZIC 4 isoform X1 2839 bp XP_041417969 X. laevis.L
XM_041562036 XM_041562036.1 XP_041417970.1 zinc finger protein ZIC 4 isoform X2 6419 bp XP_041417970 X. laevis.L
XM_041562037 XM_041562037.1 XP_041417971.1 zinc finger protein ZIC 4 isoform X3 2264 bp XP_041417971 X. laevis.L
XM_018265794 XM_018265794.2 zinc finger protein ZIC 4-like isoform X1 3261 bp XP_018121283 X. laevis.S
XM_041564956 XM_041564956.1 XP_041420890.1 zinc finger protein ZIC 4-like isoform X2 3159 bp XP_041420890 X. laevis.S

Models - Gene (28)

Source Version Model Species
NCBI 10.1 XBXL10_1g24123 X. laevis.L
NCBI 10.1 XBXL10_1g25968 X. laevis.S
NCBI 10.0 XBXT10g011207 X. tropicalis
ENSEMBL 10.0 zic4 X. tropicalis
Xenbase 9.2 gene40641 X. laevis.S
Xenbase 9.2 gene38484 X. laevis.L
JGI 9.1 Xelaev18029828m.g X. laevis.S
JGI 9.1 Xelaev18027741m.g X. laevis.L
Xenbase 9.1 gene8413 X. tropicalis
ENSEMBL 9.1 zic4 X. tropicalis
JGI 8.0 Xetrov14021746m.g X. tropicalis
JGI 7.2 Xelaev16008686m.g X. laevis.L
JGI 7.1 Xetro.E00025 X. tropicalis
JGI 6.0 XeXenL6RMv10002522m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000015475 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_284000028 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2840047 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2840024 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2840005 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2840016 X. tropicalis
JGI 4.1 C_scaffold_284000011 X. tropicalis
JGI 4.1 gw1.284.5.1 X. tropicalis
JGI 4.1 gw1.284.47.1 X. tropicalis
JGI 4.1 gw1.284.24.1 X. tropicalis
JGI 4.1 e_gw1.284.5.1 X. tropicalis
JGI 4.1 e_gw1.284.47.1 X. tropicalis
JGI 4.1 e_gw1.284.24.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_284000009 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.1 XBmRNA45130 X. laevis.L
NCBI 10.1 XBmRNA48580 X. laevis.S
ENSEMBL 10.0 ENSXETT00000071800 X. tropicalis
ENSEMBL 10.0 ENSXETT00000033815 X. tropicalis
NCBI 10.0 mRNA055631 X. tropicalis
Xenbase 9.2 rna82741 X. laevis.S
Xenbase 9.2 rna79641 X. laevis.L
ENSEMBL 9.1 ENSXETT00000071800 X. tropicalis
Xenbase 9.1 rna27218 X. tropicalis
JGI 9.1 Xelaev18027741m X. laevis.L
JGI 9.1 Xelaev18029828m X. laevis.S
ENSEMBL 9.1 ENSXETT00000033815 X. tropicalis
JGI 8.0 Xetrov14021746m X. tropicalis
JGI 7.2 Xelaev16008686m X. laevis.L
JGI 7.1 Xetro.E00025.1 X. tropicalis
JGI 6.0 XeXenL6RMv10002522m X. laevis.L
JGI 4.1 gw1.284.24.1 X. tropicalis
JGI 4.1 e_gw1.284.24.1 X. tropicalis
JGI 4.1 e_gw1.284.47.1 X. tropicalis
JGI 4.1 e_gw1.284.5.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000033815 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2840016 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2840005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2840024 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2840047 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_284000028 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_284000009 X. tropicalis
JGI 4.1 C_scaffold_284000011 X. tropicalis
JGI 4.1 gw1.284.47.1 X. tropicalis
JGI 4.1 gw1.284.5.1 X. tropicalis

mRNAs from cDNA libraries (17)

Clone Accession Species Library Anatomy Stage
XM_031902439 X. tropicalis
XM_031902440 X. tropicalis
XM_031902441 X. tropicalis
XM_031902442 X. tropicalis
XM_031902443 X. tropicalis
XR_001924659 X. tropicalis
AB259564 X. laevis.L
NM_001127780 X. laevis.L
XM_041562033 X. laevis.L
XM_041562034 X. laevis.L
XM_041562035 X. laevis.L
XM_041562036 X. laevis.L
XM_041562037 X. laevis.L
XM_018265794 X. laevis.S
XM_041564956 X. laevis.S
XR_001935973 X. laevis.S
XR_005961645 X. laevis.S

ESTs (21)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:6991598 CF240494 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7664784 CX849625 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7563690 CX473838 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7585147 CX317709 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7673738 CX883439 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7571408 CX512543 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7663790 CX848363 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
rst12d09 DC136182 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7571408 CX512542 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6991598 CF240495 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7585147 CX317708 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7663790 CX848362 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7673738 CX883438 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
XL149e06 BJ095277 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL061n17 BJ059210 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL066n17 BJ060796 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL066n17 BJ079012 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL149e06 BJ099120 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxl311o05 DC091546 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL093d05 BJ088490 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL061n17 BJ077716 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25