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Summary Expression Phenotypes Gene Literature (2) GO Terms (4) Nucleotides (597) Proteins (56) Interactants (255) Wiki
XB-GENEPAGE-482142

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for hmgn3 - All

RefSeq mRNAs(10)
Models - Gene (20)
Models - mRNA (23)
mRNAs (17)
ESTs (485)

RefSeq mRNAs (10)

Accession Version Protein Name Length Protein Species
NM_001016376 NM_001016376.2 high mobility group nucleosome-binding domain-containing protein 3 754 bp NP_001016376 X. tropicalis
XM_012962995 XM_012962995.3 high mobility group nucleosome-binding domain-containing protein 3 isoform X2 962 bp XP_012818449 X. tropicalis
XM_012962994 XM_012962994.3 high mobility group nucleosome-binding domain-containing protein 3 isoform X1 1075 bp XP_012818448 X. tropicalis
NM_001086253 NM_001086253.1 high mobility group nucleosomal binding domain 3 S homeolog 864 bp NP_001079722 X. laevis.S
NM_001088702 NM_001088702.1 high mobility group nucleosomal binding domain 3 L homeolog 916 bp NP_001082171 X. laevis.L
XM_018264234 XM_018264234.2 high mobility group nucleosomal binding domain 3 S homeolog isoform X3 878 bp XP_018119723 X. laevis.S
XM_018264233 XM_018264233.2 high mobility group nucleosomal binding domain 3 S homeolog isoform X2 969 bp XP_018119722 X. laevis.S
XM_018264231 XM_018264231.2 high mobility group nucleosomal binding domain 3 S homeolog isoform X1 985 bp XP_018119720 X. laevis.S
XM_018240548 XM_018240548.2 high mobility group nucleosomal binding domain 3 L homeolog isoform X2 1004 bp XP_018096037 X. laevis.L
XM_018240547 XM_018240547.2 high mobility group nucleosomal binding domain 3 L homeolog isoform X1 1110 bp XP_018096036 X. laevis.L

Models - Gene (20)

Source Version Model Species
NCBI 10.0 XBXT10g014830 X. tropicalis
NCBI 10.1 XBXL10_1g25592 X. laevis.S
NCBI 10.1 XBXL10_1g23678 X. laevis.L
ENSEMBL 10.0 hmgn3 X. tropicalis
JGI 9.1 Xelaev18029439m.g X. laevis.S
JGI 9.1 Xelaev18002144m.g X. laevis.L
Xenbase 9.1 gene3883 X. tropicalis
Xenbase 9.2 gene41657 X. laevis.S
Xenbase 9.2 gene48363 X. laevis.L
ENSEMBL 9.1 hmgn3 X. tropicalis
JGI 7.1 Xetro.E00532 X. tropicalis
JGI 7.2 Xelaev16060697m.g X. laevis.S
JGI 6.0 XeXenL6RMv10021965m.g X. laevis.S
JGI 6.0 XeXenL6RMv10033983m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000025850 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_193000005 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_193000005 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_193000006 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_193000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_193000024 X. tropicalis

mRNAs based on gene models(23)

Source Version Model Species
NCBI 10.0 mRNA073302 X. tropicalis
NCBI 10.1 XBmRNA44180 X. laevis.L
NCBI 10.1 XBmRNA47782 X. laevis.S
ENSEMBL 10.0 ENSXETT00000054867 X. tropicalis
ENSEMBL 10.0 ENSXETT00000057640 X. tropicalis
JGI 9.1 Xelaev18029439m X. laevis.S
JGI 9.1 Xelaev18002144m X. laevis.L
Xenbase 9.1 rna12668 X. tropicalis
Xenbase 9.2 rna93922 X. laevis.L
Xenbase 9.2 rna84162 X. laevis.S
ENSEMBL 9.1 ENSXETT00000054867 X. tropicalis
ENSEMBL 9.1 ENSXETT00000057640 X. tropicalis
JGI 7.1 Xetro.E00532.2 X. tropicalis
JGI 7.1 Xetro.E00532.1 X. tropicalis
JGI 7.2 Xelaev16060697m X. laevis.S
JGI 6.0 XeXenL6RMv10021965m X. laevis.S
JGI 6.0 XeXenL6RMv10033983m X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_193000005 X. tropicalis
ENSEMBL 4.1 ENSXETT00000054867 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_193000005 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_193000006 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_193000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_193000024 X. tropicalis

mRNAs from cDNA libraries (17)

Clone Accession Species Library Anatomy Stage
NM_001016376 X. tropicalis
TEgg069f23 CR761250 X. tropicalis
IMAGE:9013364 BC153684 X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
XM_012962995 X. tropicalis
XM_012962994 X. tropicalis
IMAGE:4681438 BC041718 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6945550 BC082880 X. laevis.L
IMAGE:6871786 BC053757 X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6872785 BC053762 X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IM8-E3-140 AF170327 X. laevis.L
NM_001086253 X. laevis.S
NM_001088702 X. laevis.L
XM_018264234 X. laevis.S
XM_018264233 X. laevis.S
XM_018264231 X. laevis.S
XM_018240548 X. laevis.L
XM_018240547 X. laevis.L

ESTs (485)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu033d15 AL656751 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:9010900 EL855527 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9013364 EL859607 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9020042 EL869609 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8925591 EL671441 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8928056 EL675943 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8928739 EL677033 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:9008764 EL809629 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8855507 EL817976 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8918871 EL832695 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8859789 EL843805 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8892610 EL853100 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9009644 EL853726 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
xtbs22H21 CN083378 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs35K24 CN091637 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs09I24 CN094215 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:8867157 EL705923 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8867735 EL706643 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8870227 EL711552 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8924570 EL670121 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
st70i13 DC184060 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xtbs04B15 CN074039 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs11F04 CN076368 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs12B05 CN076825 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs20M07 CN081853 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7637712 CX407959 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7639743 CX385617 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7787492 CX332676 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT4681 CX400811 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st14j11 DC166969 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st15j11 DC167263 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st29n05 DC171629 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7549469 CX484414 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7550015 CX485205 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553661 CX491906 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7619235 CX346715 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7623368 CX372665 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7624334 CX401882 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7625420 CX378664 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7632695 CX373977 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7543006 CX458367 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7595859 CX336094 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7597943 CX387104 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7600136 CX345228 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7603220 CX394941 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7609241 CX410504 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610724 CX377305 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7615655 CX391975 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7546267 CX499409 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7558543 CX497881 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7561146 CX464209 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7561926 CX465626 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7561786 CX465645 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563321 CX467945 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7569356 CX453344 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7570090 CX454779 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7574558 CX441518 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7535413 CX475984 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541683 CX448513 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7798261 DR886512 5' X. tropicalis NIH_XGC_tropMet6 whole organism NF stage 62
IMAGE:7592643 DR890323 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7604200 DR893514 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7622580 DR899043 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7517760 CX749340 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7670663 CX877705 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7734297 DN018837 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7803817 DR838597 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7796989 DR884641 5' X. tropicalis NIH_XGC_tropMet5 whole organism NF stage 62
IMAGE:7796924 DR884796 5' X. tropicalis NIH_XGC_tropMet5 whole organism NF stage 62
IMAGE:7558601 CX497955 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7464306 CV810585 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7528649 CX425449 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7528852 CX425733 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7524434 CX439418 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7588729 CX310294 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7584784 CX317534 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7586185 CX319119 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA001o06 CR564453 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA017j01 CR568430 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA026k20 CR573814 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA037g18 CR577301 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA023l21 CR578572 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA049g17 CR578988 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA048e24 CR584085 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA015a06 CR418147 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA024f14 CR419596 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA050a16 CR421953 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA036p21 CR440002 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA057a04 CR442358 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA031h19 CR444066 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA006p09 CR448065 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA007a12 CR560219 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr27L01 CN105431 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr35I18 CN110432 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr40D04 CN114242 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr45F09 CN116923 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA003k19 CR408653 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7093354 CK655822 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
xthr17M23 CN100115 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36