Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (13) GO Terms (7) Nucleotides (248) Proteins (46) Interactants (49) Wiki
XB-GENEPAGE-487361

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for nherf1 - All

RefSeq mRNAs(4)
Models - Gene (29)
Models - mRNA (31)
mRNAs (8)
ESTs (132)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001006750 NM_001006750.1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 1517 bp NP_001006751 X. tropicalis
NM_001095186 NM_001095186.1 uncharacterized protein LOC495828 1498 bp NP_001088655 X. laevis.L
NM_001095598 NM_001095598.1 NHERF family PDZ scaffold protein 1S homeolog 1485 bp NP_001089067 X. laevis.S
XM_018234550 XM_018234550.2 uncharacterized protein LOC495828 isoform X1 1507 bp XP_018090039 X. laevis.L

Models - Gene (29)

Source Version Model Species
NCBI 10.0 XBXT10g014317 X. tropicalis
NCBI 10.1 XBXL10_1g43023 X. laevis.S
NCBI 10.1 XBXL10_1g40039 X. laevis.L
ENSEMBL 10.0 slc9a3r1 X. tropicalis
JGI 9.1 Xelaev18046673m.g X. laevis.S
JGI 9.1 Xelaev18044026m.g X. laevis.L
Xenbase 9.1 gene4845 X. tropicalis
Xenbase 9.2 gene10448 X. laevis.S
Xenbase 9.2 gene50 X. laevis.L
JGI 8.0 Xetrov14039951m.g X. tropicalis
JGI 7.1 Xetro.J00175 X. tropicalis
JGI 7.2 Xelaev16042566m.g X. laevis.S
JGI 6.0 XeXenL6RMv10003433m.g X. laevis.S
JGI 6.0 XeXenL6RMv10039766m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000006840 X. tropicalis
JGI 4.1 e_gw1.504.32.1 X. tropicalis
JGI 4.1 e_gw1.504.94.1 X. tropicalis
JGI 4.1 e_gw1.504.95.1 X. tropicalis
JGI 4.1 gw1.504.32.1 X. tropicalis
JGI 4.1 gw1.504.94.1 X. tropicalis
JGI 4.1 gw1.504.95.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5040003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5040014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5040015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5040005 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_504000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_504000014 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_504000015 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_504000005 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.0 mRNA070828 X. tropicalis
NCBI 10.1 XBmRNA75314 X. laevis.L
NCBI 10.1 XBmRNA80873 X. laevis.S
ENSEMBL 10.0 ENSXETT00000108045 X. tropicalis
ENSEMBL 10.0 ENSXETT00000116760 X. tropicalis
JGI 9.1 Xelaev18044026m X. laevis.L
JGI 9.1 Xelaev18046673m X. laevis.S
Xenbase 9.1 rna15781 X. tropicalis
Xenbase 9.2 rna153 X. laevis.L
Xenbase 9.2 rna30361 X. laevis.S
JGI 8.0 Xetrov14039951m X. tropicalis
JGI 7.1 Xetro.J00175.1 X. tropicalis
JGI 7.2 Xelaev16042566m X. laevis.S
JGI 6.0 XeXenL6RMv10003433m X. laevis.S
JGI 6.0 XeXenL6RMv10039766m X. laevis.S
JGI 4.1 e_gw1.504.32.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000014968 X. tropicalis
ENSEMBL 4.1 ENSXETT00000014969 X. tropicalis
JGI 4.1 e_gw1.504.94.1 X. tropicalis
JGI 4.1 e_gw1.504.95.1 X. tropicalis
JGI 4.1 gw1.504.32.1 X. tropicalis
JGI 4.1 gw1.504.94.1 X. tropicalis
JGI 4.1 gw1.504.95.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5040003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5040014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5040015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5040005 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_504000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_504000014 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_504000015 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_504000005 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
NM_001006750 X. tropicalis
IMAGE:6989800 BC075520 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7009205 BC086464 X. laevis.L
AY224590 X. laevis.S
NM_001095186 X. laevis.L
NM_001095598 X. laevis.S
IMAGE:8821101 BC153791 X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
XM_018234550 X. laevis.L

ESTs (132)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8931609 EL666697 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8924001 EL668908 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8924454 EL669988 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8927821 EL675663 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8915419 EL828150 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8954395 EL654149 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8953828 EL655431 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8960007 EL657775 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8947221 EL658947 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:8961720 EL660409 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8961375 EL662407 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8959165 EL662825 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8931230 EL666383 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
st11n06 DC166134 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st61b11 DC181675 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st66n02 DC183140 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xtbs22H19 CN083376 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:8966772 EL654102 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:7531289 CX421053 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539925 CX452886 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7549458 CX484985 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7623056 CX372521 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO8222 CX942442 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8945144 EG653268 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:8946430 EG653313 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:8943535 EG654963 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:7673428 CX883272 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7720687 CX995280 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7737119 DN024494 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7556432 CX504312 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7718273 CX980040 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7572756 CX436183 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551079 CX510064 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7513866 CX743476 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7514520 CX744885 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7671423 CX878985 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
xthr46C12 CN117302 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr09L13 CN119071 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA023h14 CR444206 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA051m16 CR579598 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7530480 CX419563 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr11D09 CN096469 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr25A08 CN104096 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr37O22 CN111698 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas006i11 AL595412 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA023j02 BX711826 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA067d17 BX735452 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas069o02 AL683793 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas114c19 AL967814 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas130h10 AL968985 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas097f09 AL970877 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas115i04 AL973107 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5379464 BQ523621 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6990650 CF217374 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6990650 CF217375 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6989800 CF219380 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6989800 CF219381 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6976521 CF223082 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6977818 CF225053 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TNeu010g04 AL638151 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5308458 BQ390486 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5384151 BQ396722 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5336446 BQ521847 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5379464 BQ523620 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:8924001 EL668907 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8924454 EL669987 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8915419 EL828151 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8931230 EL666382 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8931609 EL666696 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
rst11n06 DC136065 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst61b11 DC151411 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst45b08 DC147621 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xtbs22H19 CN083375 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7531289 CX421052 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CAAO8222 CX942441 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7673428 CX883271 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7718273 CX980039 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7737119 DN024493 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7514520 CX744884 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7572756 CX436182 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539925 CX452885 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7549458 CX484984 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7556432 CX504311 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551079 CX510063 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7513866 CX743475 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
xthr46C12 CN117301 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr09L13 CN119070 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA021p21 CR417743 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA023h14 CR444207 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA051m16 CR579599 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas114c19 BX753296 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas097f09 BX754744 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas115i04 BX756624 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas130h10 BX760799 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xthr11D09 CN096468 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr25A08 CN104095 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr37O22 CN111697 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TNeu075j07 BX699102 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA023j02 BX711827 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40