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Summary Expression Phenotypes Gene Literature (1) GO Terms (38) Nucleotides (192) Proteins (55) Interactants (11) Wiki
XB-GENEPAGE-5868351

Show:     All X. tropicalis X. laevis

Nucleotide sequences for spg11 - All

RefSeq mRNAs(6)
Models - Gene (28)
Models - mRNA (35)
mRNAs (7)
ESTs (65)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
NM_203738 NM_203738.3 spatacsin 7500 bp NP_989069 X. tropicalis
XM_012958758 XM_012958758.2 spatacsin isoform X1 7497 bp XP_012814212 X. tropicalis
XM_031897783 XM_031897783.1 XP_031753643.1 spatacsin isoform X2 6966 bp XP_031753643 X. tropicalis
XM_018253359 XM_018253359.2 spatacsin isoform X3 7673 bp XP_018108848 X. laevis.L
XM_041586925 XM_041586925.1 XP_041442859.1 spatacsin isoform X1 7401 bp XP_041442859 X. laevis.L
XM_041586926 XM_041586926.1 XP_041442860.1 spatacsin isoform X2 7398 bp XP_041442860 X. laevis.L

Models - Gene (28)

Source Version Model Species
NCBI 10.1 XBXL10_1g13452 X. laevis.L
NCBI 10.0 XBXT10g002154 X. tropicalis
ENSEMBL 10.0 spg11 X. tropicalis
Xenbase 9.2 gene4034 X. laevis.L
JGI 9.1 Xelaev18018479m.g X. laevis.L
Xenbase 9.1 gene8485 X. tropicalis
ENSEMBL 9.1 lsp1 X. tropicalis
JGI 7.1 Xetro.C00548 X. tropicalis
JGI 6.0 XeXenL6RMv10012213m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000007839 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_400011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_400028 X. tropicalis
JGI 4.1 e_gw1.40.88.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_400012 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_40000011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_40000028 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_40000029 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_40000012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_400029 X. tropicalis
JGI 4.1 e_gw1.40.158.1 X. tropicalis
JGI 4.1 e_gw1.40.175.1 X. tropicalis
JGI 4.1 gw1.40.175.1 X. tropicalis
JGI 4.1 gw1.40.88.1 X. tropicalis
JGI 4.1 gw1.40.158.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_400023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_400088 X. tropicalis
JGI 4.1 estExt_Genewise1.C_400157 X. tropicalis
JGI 4.1 estExt_Genewise1.C_400174 X. tropicalis

mRNAs based on gene models(35)

Source Version Model Species
NCBI 10.1 XBmRNA25561 X. laevis.L
ENSEMBL 10.0 ENSXETT00000101451 X. tropicalis
NCBI 10.0 mRNA010884 X. tropicalis
ENSEMBL 10.0 ENSXETT00000054076 X. tropicalis
Xenbase 9.2 rna11733 X. laevis.L
JGI 9.1 Xelaev18018479m X. laevis.L
ENSEMBL 9.1 ENSXETT00000074356 X. tropicalis
Xenbase 9.1 rna27449 X. tropicalis
ENSEMBL 9.1 ENSXETT00000054076 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101451 X. tropicalis
JGI 7.1 Xetro.C00548.2 X. tropicalis
JGI 7.1 Xetro.C00548.1 X. tropicalis
JGI 7.1 Xetro.C00548.3 X. tropicalis
JGI 7.1 Xetro.C00548.4 X. tropicalis
JGI 7.1 Xetro.C00548.5 X. tropicalis
JGI 6.0 XeXenL6RMv10012213m X. laevis.L
JGI 4.1 gw1.40.158.1 X. tropicalis
JGI 4.1 gw1.40.175.1 X. tropicalis
JGI 4.1 gw1.40.88.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_40000011 X. tropicalis
JGI 4.1 e_gw1.40.175.1 X. tropicalis
JGI 4.1 e_gw1.40.88.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000017140 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_400011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_400028 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_400029 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_400012 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_400023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_400088 X. tropicalis
JGI 4.1 estExt_Genewise1.C_400157 X. tropicalis
JGI 4.1 estExt_Genewise1.C_400174 X. tropicalis
JGI 4.1 e_gw1.40.158.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_40000028 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_40000029 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_40000012 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:5381573 BC061290 X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
NM_203738 X. tropicalis
XM_012958758 X. tropicalis
XM_031897783 X. tropicalis
XM_018253359 X. laevis.L
XM_041586925 X. laevis.L
XM_041586926 X. laevis.L

ESTs (65)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7650896 CX812046 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8856522 EL819429 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7651534 CX813473 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645335 CX802243 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7661068 CX842517 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8856556 EL819339 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7665983 CX851289 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7646471 CX803847 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7691110 CX916681 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8954295 EL655957 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
CAAO9013 CX957025 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7646142 CX803877 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7794856 CX964235 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8919185 EL832808 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7710968 CX967132 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7647507 CX805755 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7711467 CX967953 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
xtbs30O17 CN088528 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7720205 CX983974 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7648341 CX807263 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7740987 DN031478 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:8863775 EL699963 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7798942 DN060267 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7649470 CX809465 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7804491 DR839591 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8952443 EG652027 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:7641238 CX795259 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649904 CX810156 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:5381573 BQ527173 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7650664 CX811453 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7643678 CX799307 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8920863 EL835156 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:5381573 BQ527172 3' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
xtbs30O17 CN088527 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7641238 CX795258 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7643678 CX799306 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645335 CX802242 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646471 CX803846 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646142 CX803876 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7647507 CX805754 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648341 CX807262 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649470 CX809464 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649904 CX810155 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650664 CX811452 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650896 CX812045 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7651534 CX813472 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7661068 CX842516 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7665983 CX851288 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7691110 CX916680 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAO9013 CX957024 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7794856 CX964234 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7710968 CX967131 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7711467 CX967952 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7720205 CX983973 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7740987 DN031477 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7798942 DN060266 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7804491 DR839590 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8856556 EL819340 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8856522 EL819430 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8919185 EL832809 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8863775 EL699962 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8642318 EB727834 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
IMAGE:8542901 EB462297 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:8542901 EE297107 3' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:8542901 EE297106 3' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62