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XB-GENEPAGE-941988
Nucleotide sequences for optc - All
RefSeq mRNAs(6) |
Models - Gene (19) |
Models - mRNA (22) |
mRNAs (7) |
ESTs (4) |
RefSeq mRNAs (6)
Accession | Version | Protein Name | Length | Protein | Species |
NM_001016499 | NM_001016499.2 | opticin precursor | 1410 bp | NP_001016499 | X. tropicalis |
XM_012962412 | XM_012962412.3 | opticin isoform X3 | 1952 bp | XP_012817866 | X. tropicalis |
XM_018091263 | XM_018091263.2 | opticin isoform X2 | 2013 bp | XP_017946752 | X. tropicalis |
XM_012962407 | XM_012962407.3 | opticin isoform X1 | 2093 bp | XP_012817861 | X. tropicalis |
XM_012962404 | XM_012962404.3 | opticin isoform X1 | 2107 bp | XP_012817858 | X. tropicalis |
XM_018249305 | XM_018249305.2 | opticin | 1437 bp | XP_018104794 | X. laevis.S |
Models - Gene (19)
Source | Version | Model | Species |
NCBI | 10.0 | XBXT10g000006 | X. tropicalis |
NCBI | 10.1 | XBXL10_1g9716 | X. laevis.S |
ENSEMBL | 10.0 | optc | X. tropicalis |
JGI | 9.1 | Xelaev18014871m.g | X. laevis.S |
Xenbase | 9.1 | gene7627 | X. tropicalis |
Xenbase | 9.2 | gene1382 | X. laevis.S |
ENSEMBL | 9.1 | optc | X. tropicalis |
JGI | 7.1 | Xetro.A01252 | X. tropicalis |
JGI | 6.0 | XeXenL6RMv10034773m.g | X. laevis.S |
ENSEMBL | 4.1 | ENSXETG00000000442 | X. tropicalis |
JGI | 4.1 | fgenesh1_kg.C_scaffold_41000005 | X. tropicalis |
JGI | 4.1 | e_gw1.41.13.1 | X. tropicalis |
JGI | 4.1 | e_gw1.41.394.1 | X. tropicalis |
JGI | 4.1 | e_gw1.41.48.1 | X. tropicalis |
JGI | 4.1 | gw1.41.13.1 | X. tropicalis |
JGI | 4.1 | gw1.41.394.1 | X. tropicalis |
JGI | 4.1 | gw1.41.48.1 | X. tropicalis |
JGI | 4.1 | fgenesh1_Sanger_cdna.C_scaffold_41000006 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_41000022 | X. tropicalis |
mRNAs based on gene models(22)
Source | Version | Model | Species |
NCBI | 10.0 | mRNA000039 | X. tropicalis |
NCBI | 10.1 | XBmRNA18164 | X. laevis.S |
ENSEMBL | 10.0 | ENSXETT00000116697 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000000938 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000060164 | X. tropicalis |
JGI | 9.1 | Xelaev18014871m | X. laevis.S |
Xenbase | 9.1 | rna24555 | X. tropicalis |
Xenbase | 9.2 | rna4040 | X. laevis.S |
ENSEMBL | 9.1 | ENSXETT00000060164 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000000938 | X. tropicalis |
JGI | 7.1 | Xetro.A01252.1 | X. tropicalis |
JGI | 6.0 | XeXenL6RMv10034773m | X. laevis.S |
JGI | 4.1 | fgenesh1_kg.C_scaffold_41000005 | X. tropicalis |
ENSEMBL | 4.1 | ENSXETT00000000938 | X. tropicalis |
JGI | 4.1 | e_gw1.41.13.1 | X. tropicalis |
JGI | 4.1 | e_gw1.41.394.1 | X. tropicalis |
JGI | 4.1 | e_gw1.41.48.1 | X. tropicalis |
JGI | 4.1 | gw1.41.13.1 | X. tropicalis |
JGI | 4.1 | gw1.41.394.1 | X. tropicalis |
JGI | 4.1 | gw1.41.48.1 | X. tropicalis |
JGI | 4.1 | fgenesh1_Sanger_cdna.C_scaffold_41000006 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_41000022 | X. tropicalis |
mRNAs from cDNA libraries (7)
Clone | Accession | Species | Library | Anatomy | Stage |
NM_001016499 | X. tropicalis | ||||
TTpA008m17 | CR760802 | X. tropicalis | XGC-tadpole | whole organism | NF stage 35 and 36 to NF stage 40 |
XM_012962412 | X. tropicalis | ||||
XM_018091263 | X. tropicalis | ||||
XM_012962407 | X. tropicalis | ||||
XM_012962404 | X. tropicalis | ||||
XM_018249305 | X. laevis.S |
ESTs (4)
Clone | Accession | 5'/3' | Species | Library | Anatomy | Stage |
TTpA008m17 | BX706213 | 5' | X. tropicalis | XGC-tadpole | whole organism | NF stage 35 and 36 to NF stage 40 |
TTbA080e09 | CR441237 | 5' | X. tropicalis | XGC-tailbud | whole organism | NF stage 28 to NF stage 29 and 30 |
TTbA080e09 | CR441238 | 3' | X. tropicalis | XGC-tailbud | whole organism | NF stage 28 to NF stage 29 and 30 |
TTpA008m17 | BX706214 | 3' | X. tropicalis | XGC-tadpole | whole organism | NF stage 35 and 36 to NF stage 40 |