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Summary Expression Phenotypes Gene Literature (1) GO Terms (5) Nucleotides (202) Proteins (92) Interactants (113) Wiki
XB-GENEPAGE-947787

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for cnot4 - All

RefSeq mRNAs(24)
Models - Gene (25)
Models - mRNA (35)
mRNAs (26)
ESTs (60)

RefSeq mRNAs (24)

Accession Version Protein Name Length Protein Species
NM_001030400 NM_001030400.1 CCR4-NOT transcription complex subunit 4 2893 bp NP_001025571 X. tropicalis
XM_031897978 XM_031897978.1 XP_031753838.1 CCR4-NOT transcription complex subunit 4 isoform X7 3595 bp XP_031753838 X. tropicalis
XM_031897977 XM_031897977.1 XP_031753837.1 CCR4-NOT transcription complex subunit 4 isoform X6 3604 bp XP_031753837 X. tropicalis
XM_031897976 XM_031897976.1 XP_031753836.1 CCR4-NOT transcription complex subunit 4 isoform X5 3798 bp XP_031753836 X. tropicalis
XM_031897975 XM_031897975.1 XP_031753835.1 CCR4-NOT transcription complex subunit 4 isoform X4 3807 bp XP_031753835 X. tropicalis
XM_031897974 XM_031897974.1 XP_031753834.1 CCR4-NOT transcription complex subunit 4 isoform X3 3874 bp XP_031753834 X. tropicalis
XM_031897973 XM_031897973.1 XP_031753833.1 CCR4-NOT transcription complex subunit 4 isoform X2 4021 bp XP_031753833 X. tropicalis
XM_031897972 XM_031897972.1 XP_031753832.1 CCR4-NOT transcription complex subunit 4 isoform X1 4030 bp XP_031753832 X. tropicalis
NM_001087143 NM_001087143.1 CCR4-NOT transcription complex subunit 4 S homeolog 3588 bp NP_001080612 X. laevis.S
XM_018254084 XM_018254084.2 CCR4-NOT transcription complex subunit 4 S homeolog isoform X6 3459 bp XP_018109573 X. laevis.S
XM_018254082 XM_018254082.2 CCR4-NOT transcription complex subunit 4 S homeolog isoform X5 3469 bp XP_018109571 X. laevis.S
XM_018254081 XM_018254081.2 CCR4-NOT transcription complex subunit 4 S homeolog isoform X4 3674 bp XP_018109570 X. laevis.S
XM_018254080 XM_018254080.2 CCR4-NOT transcription complex subunit 4 S homeolog isoform X3 3685 bp XP_018109569 X. laevis.S
XM_018254079 XM_018254079.2 CCR4-NOT transcription complex subunit 4 S homeolog isoform X2 3891 bp XP_018109568 X. laevis.S
XM_018254078 XM_018254078.2 CCR4-NOT transcription complex subunit 4 S homeolog isoform X1 3900 bp XP_018109567 X. laevis.S
XM_041585878 XM_041585878.1 XP_041441812.1 CCR4-NOT transcription complex subunit 4-like isoform X9 3503 bp XP_041441812 X. laevis.L
XM_041585877 XM_041585877.1 XP_041441811.1 CCR4-NOT transcription complex subunit 4-like isoform X8 3513 bp XP_041441811 X. laevis.L
XM_041585876 XM_041585876.1 XP_041441810.1 CCR4-NOT transcription complex subunit 4-like isoform X7 3714 bp XP_041441810 X. laevis.L
XM_041585875 XM_041585875.1 XP_041441809.1 CCR4-NOT transcription complex subunit 4-like isoform X6 3724 bp XP_041441809 X. laevis.L
XM_041585874 XM_041585874.1 XP_041441808.1 CCR4-NOT transcription complex subunit 4-like isoform X5 3740 bp XP_041441808 X. laevis.L
XM_041585873 XM_041585873.1 XP_041441807.1 CCR4-NOT transcription complex subunit 4-like isoform X4 3874 bp XP_041441807 X. laevis.L
XM_041585871 XM_041585871.1 XP_041441805.1 CCR4-NOT transcription complex subunit 4-like isoform X3 3883 bp XP_041441805 X. laevis.L
XM_041585870 XM_041585870.1 XP_041441804.1 CCR4-NOT transcription complex subunit 4-like isoform X2 3941 bp XP_041441804 X. laevis.L
XM_041585869 XM_041585869.1 XP_041441803.1 CCR4-NOT transcription complex subunit 4-like isoform X1 3950 bp XP_041441803 X. laevis.L

Models - Gene (25)

Source Version Model Species
NCBI 10.0 XBXT10g006435 X. tropicalis
NCBI 10.1 XBXL10_1g15023 X. laevis.S
NCBI 10.1 XBXL10_1g11473 X. laevis.L
ENSEMBL 10.0 cnot4 X. tropicalis
JGI 9.1 Xelaev18019807m.g X. laevis.S
JGI 9.1 Xelaev18002476m.g X. laevis.L
Xenbase 9.1 gene26175 X. tropicalis
Xenbase 9.2 gene40689 X. laevis.S
Xenbase 9.2 gene15372 X. laevis.L
ENSEMBL 9.1 cnot4 X. tropicalis
JGI 8.0 Xetrov14016216m.g X. tropicalis
JGI 7.1 Xetro.C00080 X. tropicalis
JGI 7.2 Xelaev16005868m.g X. laevis.S
JGI 6.0 XeXenL6RMv10014809m.g X. laevis.S
JGI 6.0 XeXenL6RMv10032187m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000010594 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_851000001 X. tropicalis
JGI 4.1 e_gw1.851.52.1 X. tropicalis
JGI 4.1 e_gw1.851.70.1 X. tropicalis
JGI 4.1 e_gw1.851.76.1 X. tropicalis
JGI 4.1 gw1.851.52.1 X. tropicalis
JGI 4.1 gw1.851.70.1 X. tropicalis
JGI 4.1 gw1.851.76.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_851000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_851000004 X. tropicalis

mRNAs based on gene models(35)

Source Version Model Species
NCBI 10.0 mRNA031788 X. tropicalis
NCBI 10.1 XBmRNA21532 X. laevis.L
NCBI 10.1 XBmRNA27978 X. laevis.S
ENSEMBL 10.0 ENSXETT00000116176 X. tropicalis
ENSEMBL 10.0 ENSXETT00000105589 X. tropicalis
ENSEMBL 10.0 ENSXETT00000023233 X. tropicalis
ENSEMBL 10.0 ENSXETT00000106441 X. tropicalis
ENSEMBL 10.0 ENSXETT00000121819 X. tropicalis
ENSEMBL 10.0 ENSXETT00000123076 X. tropicalis
JGI 9.1 Xelaev18019807m X. laevis.S
JGI 9.1 Xelaev18002476m X. laevis.L
Xenbase 9.1 rna51454 X. tropicalis
Xenbase 9.2 rna44857 X. laevis.L
Xenbase 9.2 rna82800 X. laevis.S
JGI 8.0 Xetrov14016216m X. tropicalis
JGI 7.1 Xetro.C00080.2 X. tropicalis
JGI 7.1 Xetro.C00080.3 X. tropicalis
JGI 7.1 Xetro.C00080.4 X. tropicalis
JGI 7.1 Xetro.C00080.5 X. tropicalis
JGI 7.1 Xetro.C00080.1 X. tropicalis
JGI 7.1 Xetro.C00080.6 X. tropicalis
JGI 7.2 Xelaev16005868m X. laevis.S
JGI 6.0 XeXenL6RMv10014809m X. laevis.S
JGI 6.0 XeXenL6RMv10032187m X. laevis.S
JGI 4.1 fgenesh1_kg.C_scaffold_851000001 X. tropicalis
ENSEMBL 4.1 ENSXETT00000023233 X. tropicalis
ENSEMBL 4.1 ENSXETT00000023234 X. tropicalis
JGI 4.1 e_gw1.851.52.1 X. tropicalis
JGI 4.1 e_gw1.851.70.1 X. tropicalis
JGI 4.1 e_gw1.851.76.1 X. tropicalis
JGI 4.1 gw1.851.52.1 X. tropicalis
JGI 4.1 gw1.851.70.1 X. tropicalis
JGI 4.1 gw1.851.76.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_851000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_851000004 X. tropicalis

mRNAs from cDNA libraries (26)

Clone Accession Species Library Anatomy Stage
NM_001030400 X. tropicalis
IMAGE:6977820 BC090959 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
XM_031897978 X. tropicalis
XM_031897977 X. tropicalis
XM_031897976 X. tropicalis
XM_031897975 X. tropicalis
XM_031897974 X. tropicalis
XM_031897973 X. tropicalis
XM_031897972 X. tropicalis
IMAGE:4683816 BC044088 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001087143 X. laevis.S
XM_018254084 X. laevis.S
XM_018254082 X. laevis.S
XM_018254081 X. laevis.S
XM_018254080 X. laevis.S
XM_018254079 X. laevis.S
XM_018254078 X. laevis.S
XM_041585878 X. laevis.L
XM_041585877 X. laevis.L
XM_041585876 X. laevis.L
XM_041585875 X. laevis.L
XM_041585874 X. laevis.L
XM_041585873 X. laevis.L
XM_041585871 X. laevis.L
XM_041585870 X. laevis.L
XM_041585869 X. laevis.L

ESTs (60)

Clone Accession 5'/3' Species Library Anatomy Stage
TTpA078c02 BX736015 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8929526 EL678554 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8904753 EL796149 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
CAAN11008 CX926489 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7579995 CX418664 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st4g18 DC174258 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xtbs10K05 CN075393 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7695852 CX925190 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7702616 CX938511 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7717290 CX978814 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7747856 DN044330 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
TTbA038b23 CR444091 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA035k04 CR569118 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7653878 CX823006 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7686962 CX908684 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690015 CX913900 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691164 CX916372 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694112 CX922216 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:4461561 BG816424 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:6977820 CF225049 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TNeu080l12 AL784832 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu128j15 AL798129 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu126o08 AL800919 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu101a08 AL801947 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8904753 EL796150 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7691164 CX916371 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694112 CX922215 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7702616 CX938510 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAN11008 CX926488 3' X. tropicalis NIH_XGC_tropTe4 testis frog
rst4g18 DC143933 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xtbs10K05 CN075392 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7717290 CX978813 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7688012 DR831826 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7579995 DR890000 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7653878 CX823005 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7686962 CX908683 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690015 CX913899 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TTpA078c02 BX736016 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA038b23 CR444092 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA035k04 CR569119 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7695852 CX925189 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu101a08 BX690448 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu080l12 BX695450 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu126o08 BX697536 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGp998M0110567 BX852621 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL485e06ex BP698601 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7982294 DR722968 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7980472 DR724997 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8320241 DY549186 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8322390 DY549829 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
xl268e04 DC114219 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3580368 BG160624 5' X. laevis.S Wellcome CRC pRN3 head head NF stage 29 and 30
IMAGE:4683816 BQ735746 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5157077 CA793314 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6934957 CB945347 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:5514675 CF287281 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL078k04 BJ064183 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL485e06ex BP731645 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7980472 DR725039 3' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:3580368 BG020967 3' X. laevis.S Wellcome CRC pRN3 head head NF stage 29 and 30