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Summary Expression Phenotypes Gene Literature (2) GO Terms (6) Nucleotides (169) Proteins (55) Interactants (38) Wiki
XB-GENEPAGE-957547

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for trmt5 - All

Models - Gene (29)
Models - mRNA (32)
mRNAs (10)
ESTs (57)

Models - Gene (29)

Source Version Model Species
NCBI 10.0 XBXT10g011617 X. tropicalis
NCBI 10.1 XBXL10_1g35996 X. laevis.L
ENSEMBL 10.0 trmt5 X. tropicalis
JGI 9.1 Xelaev18039797m.g X. laevis.L
Xenbase 9.1 gene6969 X. tropicalis
Xenbase 9.2 gene9594 X. laevis.L
JGI 8.0 Xetrov14035080m.g X. tropicalis
JGI 7.1 Xetro.H01605 X. tropicalis
JGI 7.2 Xelaev16055671m.g X. laevis.L
JGI 6.0 XeXenL6RMv10036806m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000014455 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_491000021 X. tropicalis
JGI 4.1 e_gw1.491.10.1 X. tropicalis
JGI 4.1 e_gw1.491.58.1 X. tropicalis
JGI 4.1 e_gw1.491.9.1 X. tropicalis
JGI 4.1 gw1.491.10.1 X. tropicalis
JGI 4.1 gw1.491.58.1 X. tropicalis
JGI 4.1 gw1.491.9.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4910012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4910009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4910010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4910058 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4910005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4910021 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4910022 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4910009 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_491000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_491000022 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_491000009 X. tropicalis

Models - mRNA (32)

Source Version Model Species
NCBI 10.0 mRNA057688 X. tropicalis
NCBI 10.1 XBmRNA68074 X. laevis.L
ENSEMBL 10.0 ENSXETT00000109091 X. tropicalis
ENSEMBL 10.0 ENSXETT00000120718 X. tropicalis
JGI 9.1 Xelaev18039797m X. laevis.L
Xenbase 9.1 rna22467 X. tropicalis
Xenbase 9.2 rna27910 X. laevis.L
JGI 8.0 Xetrov14035080m X. tropicalis
JGI 7.1 Xetro.H01605.3 X. tropicalis
JGI 7.1 Xetro.H01605.2 X. tropicalis
JGI 7.1 Xetro.H01605.1 X. tropicalis
JGI 7.2 Xelaev16055671m X. laevis.L
JGI 6.0 XeXenL6RMv10036806m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_491000021 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031631 X. tropicalis
JGI 4.1 e_gw1.491.10.1 X. tropicalis
JGI 4.1 e_gw1.491.58.1 X. tropicalis
JGI 4.1 e_gw1.491.9.1 X. tropicalis
JGI 4.1 gw1.491.10.1 X. tropicalis
JGI 4.1 gw1.491.58.1 X. tropicalis
JGI 4.1 gw1.491.9.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4910012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4910009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4910010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4910058 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4910005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4910021 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4910022 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4910009 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_491000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_491000022 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_491000009 X. tropicalis

mRNAs (10)

Clone Accession Species Library Anatomy Stage
THdA009n18 CU025189 X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
XM_002939476 X. tropicalis
XM_004917211 X. tropicalis
XM_031890757 X. tropicalis
IMAGE:5084857 BC106605 X. laevis.L
IMAGE:6868500 BC097924 X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
NM_001096340 X. laevis.L
XM_018229230 X. laevis.L
XM_018229229 X. laevis.L
XM_018229228 X. laevis.L

ESTs (57)

Clone Accession 5'/3' Species Library Anatomy Stage
xtbs05A04 CN074502 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
CAAO5629 CX937722 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7618275 CX362888 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7578755 CX416739 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7577697 CX423178 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576816 CX422393 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540070 CX460910 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7538542 CX450626 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568450 CX456445 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564641 CX474785 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7671054 CX879066 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7529237 CX425960 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7528024 CX424788 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA002f06 CR576408 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA009n18 CR564986 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas087n11 AL955073 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas009n11 AL630315 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu096b12 AL786876 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
CAAO5629 CX937721 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7578755 CX416738 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540070 CX460909 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7671054 CX879065 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7618275 DR897655 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7568450 CX456444 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7538542 CX450625 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7577697 CX423177 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576816 CX422392 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA009n18 CR564987 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA052o11 CR443658 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas087n11 BX751749 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xl233k15 DC103753 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl299j09 DC122906 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl332c01 DC132700 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk141e06ex DC048904 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk135i04ex DC047025 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk131a10ex DC045592 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk51c22ex DC032828 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL069p11 BJ063042 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6868525 CA981902 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6868500 CA981883 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6325257 CA973175 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:5154779 CA791996 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
BG409785 BG409785 5' X. laevis.L Stage 10+ Gastrula Library whole organism NF stage 10 to NF stage 10.5
IMAGE:3437248 BF613185 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:3430375 BF611366 5' X. laevis.L Wellcome CRC pcDNAI egg egg unfertilized egg stage
IMAGE:3381220 BF048282 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
PBX0029F04 AW635123 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:2942113 AW460818 5' X. laevis.L Xenla 13LiCl whole organism NF stage 13
rxl233k15 DC069606 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl332c01 DC096724 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl299j09 DC088054 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk51c22ex DC000059 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk135i04ex DC013817 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk141e06ex DC015635 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk131a10ex DC012420 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL069p11 BJ080961 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3430375 BF612963 3' X. laevis.L Wellcome CRC pcDNAI egg egg unfertilized egg stage