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Summary Expression Phenotypes Gene Literature (4) GO Terms (5) Nucleotides (256) Proteins (77) Interactants (122) Wiki
XB-GENEPAGE-977754

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for utp4 - All

RefSeq mRNAs(8)
Models - Gene (36)
Models - mRNA (54)
mRNAs (11)
ESTs (126)

RefSeq mRNAs (8)

Accession Version Protein Name Length Protein Species
NM_001045698 NM_001045698.2 U3 small nucleolar RNA-associated protein 4 homolog 2549 bp NP_001039163 X. tropicalis
NM_001085980 NM_001085980.1 UTP4 small subunit processome component L homeolog 2878 bp NP_001079449 X. laevis.L
XM_018260569 XM_018260569.2 U3 small nucleolar RNA-associated protein 4 homolog isoform X2 2719 bp XP_018116058 X. laevis.S
XM_018260568 XM_018260568.2 U3 small nucleolar RNA-associated protein 4 homolog isoform X1 2704 bp XP_018116057 X. laevis.S
XM_018260567 XM_018260567.2 U3 small nucleolar RNA-associated protein 4 homolog isoform X1 2725 bp XP_018116056 X. laevis.S
XM_018256412 XM_018256412.2 UTP4 small subunit processome component L homeolog isoform X1 2921 bp XP_018111901 X. laevis.L
XM_041561178 XM_041561178.1 XP_041417112.1 U3 small nucleolar RNA-associated protein 4 homolog isoform X4 2818 bp XP_041417112 X. laevis.S
XM_041561177 XM_041561177.1 XP_041417111.1 U3 small nucleolar RNA-associated protein 4 homolog isoform X3 1959 bp XP_041417111 X. laevis.S

Models - Gene (36)

Source Version Model Species
NCBI 10.0 XBXT10g018163 X. tropicalis
NCBI 10.1 XBXL10_1g18753 X. laevis.L
NCBI 10.1 XBXL10_1g21309 X. laevis.S
ENSEMBL 10.0 cdh1 X. tropicalis
JGI 9.1 Xelaev18022633m.g X. laevis.L
JGI 9.1 Xelaev18024915m.g X. laevis.S
Xenbase 9.1 gene4108 X. tropicalis
Xenbase 9.2 gene19339 X. laevis.L
Xenbase 9.2 gene20011 X. laevis.S
ENSEMBL 9.1 cdh3 X. tropicalis
JGI 8.0 Xetrov14018698m.g X. tropicalis
JGI 7.1 Xetro.D00895 X. tropicalis
JGI 7.2 Xelaev16025762m.g X. laevis.L
JGI 6.0 XeXenL6RMv10004216m.g X. laevis.L
JGI 6.0 XeXenL6RMv10030662m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000016376 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1810009 X. tropicalis
JGI 4.1 e_gw1.181.2.1 X. tropicalis
JGI 4.1 e_gw1.181.86.1 X. tropicalis
JGI 4.1 e_gw1.181.99.1 X. tropicalis
JGI 4.1 gw1.181.2.1 X. tropicalis
JGI 4.1 gw1.181.86.1 X. tropicalis
JGI 4.1 gw1.181.99.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1810008 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1810002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1810086 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1810099 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1810002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1810026 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1810027 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_181000001 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_181000002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_181000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_181000026 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_181000027 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_181000009 X. tropicalis

mRNAs based on gene models(54)

Source Version Model Species
NCBI 10.0 mRNA089684 X. tropicalis
NCBI 10.1 XBmRNA34584 X. laevis.L
NCBI 10.1 XBmRNA39438 X. laevis.S
ENSEMBL 10.0 ENSXETT00000065320 X. tropicalis
ENSEMBL 10.0 ENSXETT00000035752 X. tropicalis
ENSEMBL 10.0 ENSXETT00000095339 X. tropicalis
ENSEMBL 10.0 ENSXETT00000095982 X. tropicalis
ENSEMBL 10.0 ENSXETT00000077787 X. tropicalis
ENSEMBL 10.0 ENSXETT00000035760 X. tropicalis
ENSEMBL 10.0 ENSXETT00000094885 X. tropicalis
ENSEMBL 10.0 ENSXETT00000104687 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083120 X. tropicalis
JGI 9.1 Xelaev18022633m X. laevis.L
JGI 9.1 Xelaev18024915m X. laevis.S
Xenbase 9.1 rna13416 X. tropicalis
Xenbase 9.2 rna56495 X. laevis.L
Xenbase 9.2 rna58410 X. laevis.S
ENSEMBL 9.1 ENSXETT00000098010 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102938 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104687 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087182 X. tropicalis
ENSEMBL 9.1 ENSXETT00000105076 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094885 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083120 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095339 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074991 X. tropicalis
ENSEMBL 9.1 ENSXETT00000035760 X. tropicalis
JGI 8.0 Xetrov14018698m X. tropicalis
JGI 7.1 Xetro.D00895.2 X. tropicalis
JGI 7.1 Xetro.D00895.1 X. tropicalis
JGI 7.2 Xelaev16025762m X. laevis.L
JGI 6.0 XeXenL6RMv10004216m X. laevis.L
JGI 6.0 XeXenL6RMv10030662m X. laevis.L
JGI 4.1 estExt_fgenesh1_pm.C_1810009 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035752 X. tropicalis
JGI 4.1 e_gw1.181.2.1 X. tropicalis
JGI 4.1 e_gw1.181.86.1 X. tropicalis
JGI 4.1 e_gw1.181.99.1 X. tropicalis
JGI 4.1 gw1.181.2.1 X. tropicalis
JGI 4.1 gw1.181.86.1 X. tropicalis
JGI 4.1 gw1.181.99.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1810008 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1810002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1810086 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1810099 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1810002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1810026 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1810027 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_181000001 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_181000002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_181000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_181000026 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_181000027 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_181000009 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
NM_001045698 X. tropicalis
TNeu126f12 CR942639 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7543689 BC158952 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:4682694 BC042339 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001085980 X. laevis.L
XM_018260569 X. laevis.S
XM_018260568 X. laevis.S
XM_018260567 X. laevis.S
XM_018256412 X. laevis.L
XM_041561178 X. laevis.S
XM_041561177 X. laevis.S

ESTs (126)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TGas051c03 AL673743 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO8984 CX956969 5' X. tropicalis NIH_XGC_tropTe5 testis frog
XZT4149 CX399971 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8857529 EL820884 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8883666 EL839612 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8890765 EL850421 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7605657 DR893870 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7551575 CX510815 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559941 CX515023 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7574616 CX441592 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7543689 CX459431 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7598805 CX388220 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7578386 CX416500 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7464569 CV808603 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7694943 CX923417 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7699025 CX931289 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7718424 CX981122 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
THdA011o08 CR562199 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA037g17 CR574784 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA037g10 CR577300 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA048c17 CR584763 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA048c20 CR588833 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7524008 CX438772 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA006d07 CR414130 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA008f02 CR414272 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA025i01 CR418279 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA037i04 CR418844 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA028k19 CR419786 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA067j05 CR423537 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu126f12 AL801217 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu095b17 AL803401 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA041h11 BX742465 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA003n03 CR408312 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA028k20 CR412212 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:6980856 CF148798 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6985380 CF152463 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
CAAO8984 CX956968 3' X. tropicalis NIH_XGC_tropTe5 testis frog
XZT4149 CX399970 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8857529 EL820885 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8883666 EL839613 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8890765 EL850422 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7694943 CX923416 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7699025 CX931288 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7578386 CX416499 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7574616 CX441591 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7543689 CX459430 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559941 CX515022 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7718424 CX981121 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7551575 DR889174 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7598805 DR891970 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA067j05 CR423538 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA040c01 CR446665 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7605657 CX412793 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7524008 CX438771 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA006d07 CR414131 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA008f02 CR414273 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA025i01 CR418280 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA037i04 CR418845 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA028k19 CR419787 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu095b17 BX694155 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu126f12 BX701629 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA041h11 BX742466 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas051c03 BX748940 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas136g14 BX761451 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA028k20 CR412213 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xlk5d04ex DC054284 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk102l19ex DC036498 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk157k05ex DC063327 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk124h02ex DC043442 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8319059 DY550046 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8542846 EB463552 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:8536650 EB470359 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
xlk51a07ex DC032776 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk154e02ex DC062299 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL453p13ex BP687349 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL488o01ex BP699840 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL169d04 BJ614733 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:7980898 DR720708 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL205i04 BJ623655 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL210b08 BJ624956 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL212o03 BJ625859 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL156k11 BJ611870 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL188f22 BJ619186 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL205d18 BJ623582 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:5570507 BQ736059 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5157091 CA793326 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:4970576 CF289041 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL040i19 BJ037446 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL078i03 BJ064146 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL083b12 BJ065479 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL062i10 BJ059413 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL088l20 BJ066946 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3400900 BG037626 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
IMAGE:4785643 BI442609 5' X. laevis.L Wellcome CRC pRN3 St19 26 egg animal cap whole organism unfertilized egg stage
IMAGE:4785980 BI444287 5' X. laevis.L Wellcome CRC pRN3 St19 26 egg animal cap whole organism unfertilized egg stage
IMAGE:4084464 BI477016 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:4785664 BI675785 5' X. laevis.L Wellcome CRC pRN3 St19 26 egg animal cap whole organism unfertilized egg stage
IMAGE:5536823 BQ730766 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4682694 BQ734698 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32