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Summary Expression Phenotypes Gene Literature (3) GO Terms (7) Nucleotides (167) Proteins (67) Interactants (88) Wiki
XB-GENEPAGE-987571

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for srebf1 - All

RefSeq mRNAs(16)
Models - Gene (26)
Models - mRNA (37)
mRNAs (16)
ESTs (49)

RefSeq mRNAs (16)

Accession Version Protein Name Length Protein Species
XM_002935841 XM_002935841.5 sterol regulatory element-binding protein 1 isoform X3 4079 bp XP_002935887 X. tropicalis
XM_002935840 XM_002935840.5 sterol regulatory element-binding protein 1 isoform X1 4296 bp XP_002935886 X. tropicalis
XM_004918077 XM_004918077.4 sterol regulatory element-binding protein 1 isoform X4 5033 bp XP_004918134 X. tropicalis
XM_012971249 XM_012971249.3 sterol regulatory element-binding protein 1 isoform X2 4293 bp XP_012826703 X. tropicalis
XM_018239325 XM_018239325.2 sterol regulatory element-binding protein 1 isoform X3 3877 bp XP_018094814 X. laevis.S
XM_018239324 XM_018239324.2 sterol regulatory element-binding protein 1 isoform X2 4053 bp XP_018094813 X. laevis.S
XM_018239323 XM_018239323.2 sterol regulatory element-binding protein 1 isoform X1 4056 bp XP_018094812 X. laevis.S
XM_018236631 XM_018236631.2 sterol regulatory element-binding protein 1 isoform X5 4088 bp XP_018092120 X. laevis.L
XM_018236631 sterol regulatory element-binding protein 1 isoform X5 4088 bp XP_018092120 X. laevis.L
XM_018236630 XM_018236630.2 sterol regulatory element-binding protein 1 isoform X4 3924 bp XP_018092119 X. laevis.L
XM_018236630 sterol regulatory element-binding protein 1 isoform X4 3924 bp XP_018092119 X. laevis.L
XM_018236629 XM_018236629.2 sterol regulatory element-binding protein 1 isoform X3 4273 bp XP_018092118 X. laevis.L
XM_018236629 sterol regulatory element-binding protein 1 isoform X3 4273 bp XP_018092118 X. laevis.L
XM_018236628 XM_018236628.2 sterol regulatory element-binding protein 1 isoform X1 4066 bp XP_018092117 X. laevis.L
XM_018236628 sterol regulatory element-binding protein 1 isoform X1 4066 bp XP_018092117 X. laevis.L
XM_041575839 XM_041575839.1 XP_041431773.1 sterol regulatory element-binding protein 1 isoform X2 4063 bp XP_041431773 X. laevis.L

Models - Gene (26)

Source Version Model Species
NCBI 10.0 XBXT10g010956 X. tropicalis
NCBI 10.1 XBXL10_1g41433 X. laevis.L
NCBI 10.1 XBXL10_1g44060 X. laevis.S
ENSEMBL 10.0 srebf1 X. tropicalis
JGI 9.1 Xelaev18045572m.g X. laevis.L
JGI 9.1 Xelaev18047803m.g X. laevis.S
Xenbase 9.1 gene4697 X. tropicalis
Xenbase 9.2 gene16347 X. laevis.S
ENSEMBL 9.1 srebf1 X. tropicalis
JGI 7.1 Xetro.I01586 X. tropicalis
JGI 6.0 XeXenL6RMv10033014m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000012160 X. tropicalis
JGI 4.1 e_gw1.174.203.1 X. tropicalis
JGI 4.1 e_gw1.174.114.1 X. tropicalis
JGI 4.1 e_gw1.174.265.1 X. tropicalis
JGI 4.1 gw1.174.114.1 X. tropicalis
JGI 4.1 gw1.174.203.1 X. tropicalis
JGI 4.1 gw1.174.265.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1740018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740114 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740203 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740265 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1740024 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000025 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000026 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_174000012 X. tropicalis

mRNAs based on gene models(37)

Source Version Model Species
NCBI 10.0 mRNA054282 X. tropicalis
NCBI 10.1 XBmRNA78178 X. laevis.L
NCBI 10.1 XBmRNA82876 X. laevis.S
ENSEMBL 10.0 ENSXETT00000075777 X. tropicalis
ENSEMBL 10.0 ENSXETT00000091953 X. tropicalis
ENSEMBL 10.0 ENSXETT00000079250 X. tropicalis
JGI 9.1 Xelaev18045572m X. laevis.L
JGI 9.1 Xelaev18047803m X. laevis.S
Xenbase 9.1 rna15317 X. tropicalis
Xenbase 9.2 rna47747 X. laevis.S
ENSEMBL 9.1 ENSXETT00000075777 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079250 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091953 X. tropicalis
ENSEMBL 9.1 ENSXETT00000026547 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101894 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089563 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084201 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077166 X. tropicalis
JGI 7.1 Xetro.I01586.2 X. tropicalis
JGI 7.1 Xetro.I01586.3 X. tropicalis
JGI 7.1 Xetro.I01586.1 X. tropicalis
JGI 6.0 XeXenL6RMv10033014m X. laevis.L
JGI 4.1 e_gw1.174.203.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000026547 X. tropicalis
JGI 4.1 e_gw1.174.114.1 X. tropicalis
JGI 4.1 e_gw1.174.265.1 X. tropicalis
JGI 4.1 gw1.174.114.1 X. tropicalis
JGI 4.1 gw1.174.203.1 X. tropicalis
JGI 4.1 gw1.174.265.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1740018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740114 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740203 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740265 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1740024 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000025 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000026 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_174000012 X. tropicalis

mRNAs from cDNA libraries (16)

Clone Accession Species Library Anatomy Stage
XM_002935841 X. tropicalis
XM_002935840 X. tropicalis
XM_004918077 X. tropicalis
XM_012971249 X. tropicalis
XM_018239325 X. laevis.S
XM_018239324 X. laevis.S
XM_018239323 X. laevis.S
XM_018236631 X. laevis.L
XM_018236631 X. laevis.L
XM_018236630 X. laevis.L
XM_018236630 X. laevis.L
XM_018236629 X. laevis.L
XM_018236629 X. laevis.L
XM_018236628 X. laevis.L
XM_018236628 X. laevis.L
XM_041575839 X. laevis.L

ESTs (49)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7595821 CX336152 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7786196 CX327872 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO5318 CX937153 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8951415 EL662462 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:8859249 EL823195 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7696339 CX925607 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7717663 CX979100 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7718818 CX981559 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7653442 CX822251 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7655704 CX826584 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7659424 CX839227 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7660280 CX840593 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7687074 CX908810 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687376 CX909265 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687430 CX909309 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TTpA034i06 BX715841 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA033d20 CR431717 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA019d05 CR571914 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7651965 CX814490 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
CAAO5318 CX937152 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8859249 EL823196 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7717663 CX979099 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7718818 CX981558 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7653442 CX822250 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7687074 CX908809 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692145 CX917600 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692603 CX918860 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7696339 CX925606 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7659424 CX839226 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7660280 CX840592 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7687376 CX909264 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687430 CX909308 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TTpA013f18 BX712633 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA033d20 CR431718 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7786196 CX327871 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7595821 CX336151 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:6938416 CD100864 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:5513772 CF286760 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL098n05 BJ072514 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGp998I098295 BX855530 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
IMAGE:8319582 DY552091 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8317889 DY560634 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8541535 EB464526 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:8824757 EG566004 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8824157 EG575433 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:6879687 CB207279 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6880926 CB208161 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL098n05 BJ089526 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6880926 CB560154 3' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage