Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (5) GO Terms (12) Nucleotides (176) Proteins (54) Interactants (156) Wiki
XB-GENEPAGE-999248

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for trap1 - All

Models - Gene (31)
Models - mRNA (42)
mRNAs (4)
ESTs (72)

Models - Gene (31)

Source Version Model Species
NCBI 10.0 XBXT10g001082 X. tropicalis
NCBI 10.1 XBXL10_1g41319 X. laevis.L
NCBI 10.1 XBXL10_1g43975 X. laevis.S
ENSEMBL 10.0 trap1 X. tropicalis
JGI 9.1 Xelaev18045445m.g X. laevis.L
JGI 9.1 Xelaev18047705m.g X. laevis.S
Xenbase 9.1 gene31107 X. tropicalis
Xenbase 9.2 gene11999 X. laevis.L
Xenbase 9.2 gene16291 X. laevis.S
ENSEMBL 9.1 trap1 X. tropicalis
JGI 8.0 Xetrov14038628m.g X. tropicalis
JGI 7.1 Xetro.I01441 X. tropicalis
JGI 7.2 Xelaev16079428m.g X. laevis.L
JGI 6.0 XeXenL6RMv10023477m.g X. laevis.L
JGI 6.0 XeXenL6RMv10023998m.g X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_270077 X. tropicalis
JGI 4.1 e_gw1.27.145.1 X. tropicalis
JGI 4.1 e_gw1.27.18.1 X. tropicalis
JGI 4.1 e_gw1.27.272.1 X. tropicalis
JGI 4.1 gw1.27.145.1 X. tropicalis
JGI 4.1 gw1.27.18.1 X. tropicalis
JGI 4.1 gw1.27.272.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_270053 X. tropicalis
JGI 4.1 estExt_Genewise1.C_270018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_270144 X. tropicalis
JGI 4.1 estExt_Genewise1.C_270270 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_270076 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_270029 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_27000077 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_27000078 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_27000030 X. tropicalis

Models - mRNA (42)

Source Version Model Species
NCBI 10.0 mRNA005433 X. tropicalis
NCBI 10.1 XBmRNA77972 X. laevis.L
NCBI 10.1 XBmRNA82730 X. laevis.S
ENSEMBL 10.0 ENSXETT00000074569 X. tropicalis
ENSEMBL 10.0 ENSXETT00000099650 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083542 X. tropicalis
JGI 9.1 Xelaev18045445m X. laevis.L
JGI 9.1 Xelaev18047705m X. laevis.S
Xenbase 9.1 rna59287 X. tropicalis
Xenbase 9.2 rna34870 X. laevis.L
Xenbase 9.2 rna47586 X. laevis.S
ENSEMBL 9.1 ENSXETT00000092924 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074569 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100974 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102065 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083542 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101530 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099650 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104953 X. tropicalis
ENSEMBL 9.1 ENSXETT00000066219 X. tropicalis
JGI 8.0 Xetrov14038628m X. tropicalis
JGI 7.1 Xetro.I01441.2 X. tropicalis
JGI 7.1 Xetro.I01441.1 X. tropicalis
JGI 7.2 Xelaev16079428m X. laevis.L
JGI 6.0 XeXenL6RMv10023477m X. laevis.L
JGI 6.0 XeXenL6RMv10023998m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_270077 X. tropicalis
JGI 4.1 e_gw1.27.145.1 X. tropicalis
JGI 4.1 e_gw1.27.18.1 X. tropicalis
JGI 4.1 e_gw1.27.272.1 X. tropicalis
JGI 4.1 gw1.27.145.1 X. tropicalis
JGI 4.1 gw1.27.18.1 X. tropicalis
JGI 4.1 gw1.27.272.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_270053 X. tropicalis
JGI 4.1 estExt_Genewise1.C_270018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_270144 X. tropicalis
JGI 4.1 estExt_Genewise1.C_270270 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_270076 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_270029 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_27000077 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_27000078 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_27000030 X. tropicalis

mRNAs (4)

Clone Accession Species Library Anatomy Stage
XM_002932460 X. tropicalis
IMAGE:5543053 BC130115 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XM_018239248 X. laevis.S
XM_018236530 X. laevis.L

ESTs (72)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8886708 EL844242 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8867245 EL705874 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
st6n01 DC174954 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8945837 EG655235 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
XZT13727 CX322245 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7632185 CX397656 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620768 CX341547 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7594937 CX331894 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7592875 CX326506 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7571892 CX513227 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7738395 DN026500 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7516761 CX748018 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
THdA030k17 CR569483 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA009c12 CR414378 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr20I08 CN102848 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA030o11 BX742973 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA003g18 BX706961 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:5336575 BQ522077 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:8886708 EL844243 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8867245 EL705873 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
xtbs21I23 CN082458 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
rst6n01 DC144627 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7632185 DR901287 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7738395 DN026499 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7516761 CX748017 3' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7571892 CX513226 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7620768 CX341546 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7594937 CX331893 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA009c12 CR414379 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr20I08 CN102847 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA003g18 BX706962 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:5336575 BQ522076 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
xl261c24 DC112096 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl288b19 DC119794 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl242o04 DC106619 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl327k04 DC131339 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl245f06 DC107369 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl289c20 DC120107 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl289b19 DC120085 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl316o23 DC128075 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk75j02ex DC059517 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8321025 DY568167 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8318471 DY565682 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8321769 DY556072 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL443k15ex BP683669 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL101l15 BJ074345 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL099o03 BJ072775 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL095o13 BJ071916 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL106j03 BJ068384 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL080n05 BJ064820 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL038i17 BJ039796 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:4970605 CF288995 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4970605 CF288994 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5515305 CF285925 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5515339 CF285902 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6874267 CB199249 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:5543053 BQ735832 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5572732 BQ733263 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4679987 BI449728 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3399089 BE576196 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
PBX0127E03 AW643321 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxl261c24 DC077358 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl316o23 DC092931 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk75j02ex DC026084 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL443k15ex BP719731 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL099o03 BJ089731 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL106j03 BJ085639 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL080n05 BJ076471 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL038i17 BJ053353 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6874267 CB564417 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:3744302 BG016966 3' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3399089 BE505717 3' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25