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Summary Expression Phenotypes Gene Literature (6) GO Terms (22) Nucleotides (234) Proteins (55) Interactants (108) Wiki
XB-GENEPAGE-1005615

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for nde1 - All

Models - Gene (35)
Models - mRNA (38)
mRNAs (10)
ESTs (71)

Models - Gene (35)

Source Version Model Species
NCBI 10.0 XBXT10g014402 X. tropicalis
NCBI 10.1 XBXL10_1g43812 X. laevis.S
NCBI 10.1 XBXL10_1g41098 X. laevis.L
ENSEMBL 10.0 nde1 X. tropicalis
JGI 9.1 Xelaev18047509m.g X. laevis.S
JGI 9.1 Xelaev18045182m.g X. laevis.L
Xenbase 9.1 gene21826 X. tropicalis
Xenbase 9.2 gene2721 X. laevis.S
Xenbase 9.2 gene5164 X. laevis.L
ENSEMBL 9.1 nde1 X. tropicalis
JGI 7.1 Xetro.I01155 X. tropicalis
JGI 7.2 Xelaev16031174m.g X. laevis.S
JGI 7.2 Xelaev16081343m.g X. laevis.L
JGI 6.0 XeXenL6RMv10055033m.g X. laevis.S
JGI 6.0 XeXenL6RMv10032140m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000005528 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3100003 X. tropicalis
JGI 4.1 e_gw1.310.76.1 X. tropicalis
JGI 4.1 e_gw1.310.77.1 X. tropicalis
JGI 4.1 e_gw1.310.78.1 X. tropicalis
JGI 4.1 gw1.310.76.1 X. tropicalis
JGI 4.1 gw1.310.77.1 X. tropicalis
JGI 4.1 gw1.310.78.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3100001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3100074 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3100075 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3100076 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3100001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3100004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3100001 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_310000001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_310000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_310000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_310000004 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_310000001 X. tropicalis

Models - mRNA (38)

Source Version Model Species
NCBI 10.0 mRNA071258 X. tropicalis
NCBI 10.1 XBmRNA77557 X. laevis.L
NCBI 10.1 XBmRNA82466 X. laevis.S
ENSEMBL 10.0 ENSXETT00000012155 X. tropicalis
JGI 9.1 Xelaev18045182m X. laevis.L
JGI 9.1 Xelaev18047509m X. laevis.S
Xenbase 9.1 rna44491 X. tropicalis
Xenbase 9.2 rna15100 X. laevis.L
Xenbase 9.2 rna7904 X. laevis.S
ENSEMBL 9.1 ENSXETT00000012155 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084873 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085926 X. tropicalis
JGI 7.1 Xetro.I01155.2 X. tropicalis
JGI 7.1 Xetro.I01155.1 X. tropicalis
JGI 7.2 Xelaev16031174m X. laevis.S
JGI 7.2 Xelaev16081343m X. laevis.L
JGI 6.0 XeXenL6RMv10032140m X. laevis.L
JGI 6.0 XeXenL6RMv10055033m X. laevis.S
JGI 4.1 estExt_fgenesh1_pg.C_3100003 X. tropicalis
ENSEMBL 4.1 ENSXETT00000012155 X. tropicalis
JGI 4.1 e_gw1.310.76.1 X. tropicalis
JGI 4.1 e_gw1.310.77.1 X. tropicalis
JGI 4.1 e_gw1.310.78.1 X. tropicalis
JGI 4.1 gw1.310.76.1 X. tropicalis
JGI 4.1 gw1.310.77.1 X. tropicalis
JGI 4.1 gw1.310.78.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3100001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3100074 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3100075 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3100076 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3100001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3100004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3100001 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_310000001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_310000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_310000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_310000004 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_310000001 X. tropicalis

mRNAs (10)

Clone Accession Species Library Anatomy Stage
NM_001007995 X. tropicalis
IMAGE:5379706 BC080874 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6863051 BC081010 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6640878 BC070755 X. laevis.S
U95097 X. laevis.L
NM_001091441 X. laevis.S
NM_001088345 X. laevis.L
XM_018237413 X. laevis.S
XM_018237412 X. laevis.S
XM_041579151 X. laevis.S

ESTs (71)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7757347 DR874911 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7539392 CX452507 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7620265 CX347956 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7788845 CX333831 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8928779 EL676983 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8885742 EL842320 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TGas131d24 AL967510 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7092018 CK654578 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TTbA027p15 CR412102 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7523820 CX438142 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7666057 CX851478 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7027132 CF784700 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TGas006h19 AL595577 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu001h22 AL634432 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu031a07 AL656255 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas056e12 AL676429 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas006j06 AL594507 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas021f21 AL632767 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas033n18 AL649002 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas043a24 AL654830 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas114h23 AL959965 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5379706 BQ523736 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:7028044 CF781084 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7027132 CF784699 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7757347 DR874910 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8885742 EL842321 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7092018 CN320614 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TTbA027p15 CR412103 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA008c07 CR567653 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7620265 CX347955 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7539392 CX452506 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas056e12 BX747232 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5379706 BQ523735 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
XL515c15ex BP705521 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL496o08ex BP709133 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk134n16ex DC046806 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xl314l11 DC127436 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:5515891 CF290561 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL041i15 BJ037775 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL180c22 BJ617299 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL191d12 BJ619942 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL420d05ex BP675854 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL506l01ex BP702925 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:6631987 BU906914 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6636479 BU910642 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6636603 BU910738 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6637379 BU911405 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5157358 CA793568 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6866001 CA793891 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6863051 CA986637 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6864622 CA987902 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6875282 CB200182 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
PBX0056E08 AW637259 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3401316 BE669376 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3436798 BF613364 5' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:4678242 BI477848 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4678243 BI477931 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4959208 BM179610 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6631546 BU906537 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
PBX0018E11 AW634186 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL420d05ex BP713256 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL496o08ex BP741053 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL497o08ex BP741319 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxl314l11 DC092320 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL041i15 BJ052445 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL180c22 BJ633787 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL191d12 BJ636571 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:6875282 CB984278 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:4678242 BI347489 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4959208 BI478074 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
PBX0004D07 AW633157 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage