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Summary Expression Phenotypes Gene Literature (2) GO Terms (4) Nucleotides (153) Proteins (51) Interactants (5) Wiki
XB-GENEPAGE-478053

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for trnt1 - All

Models - Gene (33)
Models - mRNA (34)
mRNAs (9)
ESTs (57)

Models - Gene (33)

Source Version Model Species
NCBI 10.0 XBXT10g019976 X. tropicalis
NCBI 10.1 XBXL10_1g19911 X. laevis.L
NCBI 10.1 XBXL10_1g22205 X. laevis.S
ENSEMBL 10.0 trnt1 X. tropicalis
JGI 9.1 Xelaev18023904m.g X. laevis.L
JGI 9.1 Xelaev18025836m.g X. laevis.S
Xenbase 9.1 gene6513 X. tropicalis
Xenbase 9.2 gene9882 X. laevis.L
Xenbase 9.2 gene15518 X. laevis.S
ENSEMBL 9.1 trnt1 X. tropicalis
JGI 8.0 Xetrov14020362m.g X. tropicalis
JGI 7.1 Xetro.D02392 X. tropicalis
JGI 7.2 Xelaev16014933m.g X. laevis.L
JGI 6.0 XeXenL6RMv10004386m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000025091 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_360000001 X. tropicalis
JGI 4.1 e_gw1.360.45.1 X. tropicalis
JGI 4.1 e_gw1.360.68.1 X. tropicalis
JGI 4.1 e_gw1.360.69.1 X. tropicalis
JGI 4.1 gw1.360.45.1 X. tropicalis
JGI 4.1 gw1.360.68.1 X. tropicalis
JGI 4.1 gw1.360.69.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3600012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3600045 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3600068 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3600069 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3600001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3600013 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3600014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3600003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_360000013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_360000014 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_360000003 X. tropicalis

Models - mRNA (34)

Source Version Model Species
NCBI 10.0 mRNA098607 X. tropicalis
NCBI 10.1 XBmRNA36829 X. laevis.L
NCBI 10.1 XBmRNA41279 X. laevis.S
ENSEMBL 10.0 ENSXETT00000066167 X. tropicalis
JGI 9.1 Xelaev18023904m X. laevis.L
JGI 9.1 Xelaev18025836m X. laevis.S
Xenbase 9.1 rna21048 X. tropicalis
Xenbase 9.2 rna28725 X. laevis.L
Xenbase 9.2 rna45313 X. laevis.S
ENSEMBL 9.1 ENSXETT00000066167 X. tropicalis
JGI 8.0 Xetrov14020362m X. tropicalis
JGI 7.1 Xetro.D02392.1 X. tropicalis
JGI 7.1 Xetro.D02392.2 X. tropicalis
JGI 7.2 Xelaev16014933m X. laevis.L
JGI 6.0 XeXenL6RMv10004386m X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_360000001 X. tropicalis
ENSEMBL 4.1 ENSXETT00000053801 X. tropicalis
JGI 4.1 e_gw1.360.45.1 X. tropicalis
JGI 4.1 e_gw1.360.68.1 X. tropicalis
JGI 4.1 e_gw1.360.69.1 X. tropicalis
JGI 4.1 gw1.360.45.1 X. tropicalis
JGI 4.1 gw1.360.68.1 X. tropicalis
JGI 4.1 gw1.360.69.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3600012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3600045 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3600068 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3600069 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3600001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3600013 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3600014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3600003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_360000013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_360000014 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_360000003 X. tropicalis

mRNAs (9)

Clone Accession Species Library Anatomy Stage
NM_203675 X. tropicalis
IMAGE:5383557 BC061356 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
XM_012960722 X. tropicalis
IMAGE:7977775 BC108537 X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
AF466151 X. laevis.S
NM_001088887 X. laevis.S
NM_001096379 X. laevis.L
IMAGE:8534265 BC153771 X. laevis.S NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
XM_041589442 X. laevis.L

ESTs (57)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8921715 EL835978 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7699346 CX932221 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7534623 CX428798 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534790 CX429605 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7545784 CX488319 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7547080 CX501060 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7629623 CX369425 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8961242 EL660965 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8913331 EL825171 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
THdA044m07 CR585882 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7586445 CX319528 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7529478 CX426587 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525404 CX442763 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7744393 DN037526 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
TGas009l16 AL628467 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas046h12 AL650273 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas087f22 AL959500 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA004o19 CR408199 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA005n14 CR417621 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA029l17 CR569363 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:6977527 CF224501 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6992477 CF241950 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TNeu015h11 AL635868 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu071l23 AL780528 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA015a16 BX715278 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA046m10 BX732436 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA046m05 BX745332 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
L1G7d05 AL637382 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5383557 BQ395750 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6980793 CF148151 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6977704 CF224208 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6977527 CF224500 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:8913331 EL825172 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7629623 DR900831 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7534623 CX428797 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA044m07 CR585883 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7534790 CX429604 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7547080 CX501059 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7699346 CX932220 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7744393 DN037525 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
TTpA046m05 BX745333 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas087f22 BX752864 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA004o19 CR408200 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA005n14 CR417622 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA029l17 CR569364 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:6992477 CF241951 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TTpA015a16 BX715279 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA046m10 BX732437 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:5383557 BQ395749 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6977704 CF224207 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:3749299 BF615397 5' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
IMAGE:3472498 BI313167 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
XL176i18 BJ616345 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL432c06ex BP679525 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7977775 DR722942 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
XL176i18 BJ632916 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL432c06ex BP716392 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5