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Summary Expression Phenotypes Gene Literature (3) GO Terms (24) Nucleotides (107) Proteins (50) Interactants (40) Wiki
XB-GENEPAGE-922863

Show:     All X. tropicalis X. laevis

Nucleotide sequences for dpf1 - All

RefSeq mRNAs(6)
Models - Gene (25)
Models - mRNA (33)
mRNAs (7)
ESTs (31)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
NM_001097276 NM_001097276.1 zinc finger protein neuro-d4 10048 bp NP_001090745 X. tropicalis
XM_012967813 XM_012967813.3 zinc finger protein neuro-d4 isoform X1 10115 bp XP_012823267 X. tropicalis
XM_018230214 XM_018230214.2 zinc finger protein neuro-d4 isoform X1 1599 bp XP_018085703 X. laevis.L
XM_018230215 XM_018230215.2 zinc finger protein neuro-d4 isoform X2 1581 bp XP_018085704 X. laevis.L
XM_018233296 XM_018233296.2 zinc finger protein neuro-d4 isoform X1 3346 bp XP_018088785 X. laevis.S
XM_018233297 XM_018233297.2 zinc finger protein neuro-d4 isoform X2 3330 bp XP_018088786 X. laevis.S

Models - Gene (25)

Source Version Model Species
NCBI 10.1 XBXL10_1g38338 X. laevis.S
NCBI 10.1 XBXL10_1g35565 X. laevis.L
NCBI 10.0 XBXT10g008563 X. tropicalis
ENSEMBL 10.0 dpf1 X. tropicalis
Xenbase 9.2 gene35071 X. laevis.L
Xenbase 9.2 gene46451 X. laevis.S
JGI 9.1 Xelaev18039288m.g X. laevis.L
JGI 9.1 Xelaev18042512m.g X. laevis.S
Xenbase 9.1 gene32691 X. tropicalis
ENSEMBL 9.1 dpf1 X. tropicalis
JGI 7.1 Xetro.H01061 X. tropicalis
JGI 6.0 XeXenL6RMv10018931m.g X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_6480003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_648000003 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6480002 X. tropicalis
JGI 4.1 e_gw1.648.24.1 X. tropicalis
JGI 4.1 e_gw1.648.25.1 X. tropicalis
JGI 4.1 e_gw1.648.3.1 X. tropicalis
JGI 4.1 gw1.648.24.1 X. tropicalis
JGI 4.1 gw1.648.25.1 X. tropicalis
JGI 4.1 gw1.648.3.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6480003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6480024 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6480025 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_6480003 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.1 XBmRNA72423 X. laevis.S
NCBI 10.1 XBmRNA67160 X. laevis.L
ENSEMBL 10.0 ENSXETT00000060510 X. tropicalis
NCBI 10.0 mRNA042437 X. tropicalis
ENSEMBL 10.0 ENSXETT00000067635 X. tropicalis
ENSEMBL 10.0 ENSXETT00000077647 X. tropicalis
Xenbase 9.2 rna74868 X. laevis.L
Xenbase 9.2 rna91227 X. laevis.S
Xenbase 9.1 rna61798 X. tropicalis
JGI 9.1 Xelaev18042512m X. laevis.S
JGI 9.1 Xelaev18039288m X. laevis.L
ENSEMBL 9.1 ENSXETT00000093589 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092523 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077647 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074643 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067635 X. tropicalis
ENSEMBL 9.1 ENSXETT00000062604 X. tropicalis
ENSEMBL 9.1 ENSXETT00000060510 X. tropicalis
JGI 7.1 Xetro.H01061.1 X. tropicalis
JGI 6.0 XeXenL6RMv10018931m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_648000003 X. tropicalis
JGI 4.1 gw1.648.24.1 X. tropicalis
JGI 4.1 gw1.648.25.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6480025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6480024 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6480003 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6480002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_6480003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6480003 X. tropicalis
JGI 4.1 e_gw1.648.3.1 X. tropicalis
JGI 4.1 e_gw1.648.25.1 X. tropicalis
JGI 4.1 e_gw1.648.24.1 X. tropicalis
JGI 4.1 gw1.648.3.1 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:7649828 BC129025 X. tropicalis NIH_XGC_tropBrn2 brain frog
NM_001097276 X. tropicalis
XM_012967813 X. tropicalis
XM_018230214 X. laevis.L
XM_018230215 X. laevis.L
XM_018233296 X. laevis.S
XM_018233297 X. laevis.S

ESTs (31)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7687025 CX908458 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7565841 CX482715 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA053h05 BX740680 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xtbs35E03 CN091430 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs06O08 CN092299 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7646007 CX802931 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7647503 CX805726 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648175 CX807099 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648374 CX807495 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648692 CX808043 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648696 CX808073 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649828 CX810294 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650580 CX811532 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7651780 CX813526 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7655358 CX825800 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7648175 CX807098 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648374 CX807494 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7565841 CX482714 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7655358 CX825799 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7650580 CX811531 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7648692 CX808042 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
TTpA053h05 BX740681 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xtbs35E03 CN091429 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7651780 CX813525 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
xtbs06O08 CN092298 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7648696 CX808072 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646007 CX802930 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7687025 CX908457 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7647503 CX805725 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
XL049j08 BJ039474 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL049k08 BJ039494 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15