Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (8) GO Terms (7) Nucleotides (212) Proteins (55) Interactants (194) Wiki
XB-GENEPAGE-948034

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for nup54 - All

Models - Gene (27)
Models - mRNA (34)
mRNAs (13)
ESTs (94)

Models - Gene (27)

Source Version Model Species
NCBI 10.0 XBXT10g002882 X. tropicalis
NCBI 10.1 XBXL10_1g4181 X. laevis.S
NCBI 10.1 XBXL10_1g1299 X. laevis.L
ENSEMBL 10.0 nup54 X. tropicalis
JGI 9.1 Xelaev18009519m.g X. laevis.S
JGI 9.1 Xelaev18005850m.g X. laevis.L
Xenbase 9.1 gene7277 X. tropicalis
Xenbase 9.2 gene45045 X. laevis.S
Xenbase 9.2 gene35678 X. laevis.L
ENSEMBL 9.1 nup54 X. tropicalis
JGI 8.0 Xetrov14043177m.g X. tropicalis
JGI 7.1 Xetro.H00429 X. tropicalis
JGI 7.2 Xelaev16060967m.g X. laevis.S
JGI 6.0 XeXenL6RMv10014489m.g X. laevis.S
JGI 6.0 XeXenL6RMv10025887m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000024117 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_1308000002 X. tropicalis
JGI 4.1 gw1.1308.12.1 X. tropicalis
JGI 4.1 gw1.1308.2.1 X. tropicalis
JGI 4.1 gw1.1308.6.1 X. tropicalis
JGI 4.1 e_gw1.1308.12.1 X. tropicalis
JGI 4.1 e_gw1.1308.2.1 X. tropicalis
JGI 4.1 e_gw1.1308.6.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_1308000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1308000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1308000004 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1308000002 X. tropicalis

Models - mRNA (34)

Source Version Model Species
NCBI 10.0 mRNA014628 X. tropicalis
NCBI 10.1 XBmRNA2136 X. laevis.L
NCBI 10.1 XBmRNA7713 X. laevis.S
ENSEMBL 10.0 ENSXETT00000085511 X. tropicalis
ENSEMBL 10.0 ENSXETT00000052045 X. tropicalis
ENSEMBL 10.0 ENSXETT00000098153 X. tropicalis
JGI 9.1 Xelaev18005850m X. laevis.L
JGI 9.1 Xelaev18009519m X. laevis.S
Xenbase 9.1 rna23524 X. tropicalis
Xenbase 9.2 rna75736 X. laevis.L
Xenbase 9.2 rna89228 X. laevis.S
ENSEMBL 9.1 ENSXETT00000098153 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081623 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071217 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085511 X. tropicalis
ENSEMBL 9.1 ENSXETT00000052045 X. tropicalis
JGI 8.0 Xetrov14043177m X. tropicalis
JGI 7.1 Xetro.H00429.1 X. tropicalis
JGI 7.2 Xelaev16060967m X. laevis.S
JGI 6.0 XeXenL6RMv10014489m X. laevis.S
JGI 6.0 XeXenL6RMv10025887m X. laevis.S
JGI 4.1 fgenesh1_kg.C_scaffold_1308000002 X. tropicalis
ENSEMBL 4.1 ENSXETT00000052045 X. tropicalis
ENSEMBL 4.1 ENSXETT00000052046 X. tropicalis
JGI 4.1 e_gw1.1308.12.1 X. tropicalis
JGI 4.1 e_gw1.1308.2.1 X. tropicalis
JGI 4.1 e_gw1.1308.6.1 X. tropicalis
JGI 4.1 gw1.1308.12.1 X. tropicalis
JGI 4.1 gw1.1308.2.1 X. tropicalis
JGI 4.1 gw1.1308.6.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_1308000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1308000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1308000004 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1308000002 X. tropicalis

mRNAs (13)

Clone Accession Species Library Anatomy Stage
NM_001017349 X. tropicalis
TGas114o17 CR848625 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7007536 BC082534 X. tropicalis
IMAGE:7606162 BC135328 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:5542167 BC046737 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4031140 BC060003 X. laevis.S
NM_001089733 X. laevis.S
JX993586 X. laevis.S
XM_018252609 X. laevis.L
XM_018252601 X. laevis.L
XM_018234570 X. laevis.S
XM_041574012 X. laevis.S
XM_041591079 X. laevis.L

ESTs (94)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:6989919 CF219182 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8870092 EL711611 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8889636 EL848644 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7556396 CX504389 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555803 CX502636 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7543082 CX458570 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7606162 CX366510 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7790192 CX323734 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO7183 CX940537 5' X. tropicalis NIH_XGC_tropTe5 testis frog
XZT11674 CX312015 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7710055 CX965399 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7712261 CX969513 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7733450 DN017874 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7741363 DN032501 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7801441 DR834374 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
THdA043d08 CR580223 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7527910 CX424900 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7698309 CX929916 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TNeu035o13 AL656225 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas072l17 AL775567 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas112i11 AL963822 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas114c15 AL967812 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas114o17 AL967870 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas144i24 AL968741 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA004a13 CR408067 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8889636 EL848645 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7543082 CX458569 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CAAO7183 CX940536 3' X. tropicalis NIH_XGC_tropTe5 testis frog
XZT11674 CX312014 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7712261 CX969512 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7733450 DN017873 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7741363 DN032500 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7801441 DR834373 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7790192 DR905425 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA004a13 CR408068 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA043d08 CR580224 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7606162 CX366509 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7555803 CX502635 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7556396 CX504388 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7698309 CX929915 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7710055 CX965398 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
TGas072l17 BX749566 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas114c15 BX753293 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas114o17 BX755685 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas144i24 BX761679 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XL505f23ex BP702525 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL506f23ex BP702833 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL517i14ex BP706344 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:8643944 EB734572 5' X. laevis.S NICHD_XGC_skin_m skin unspecified stage
xl254c08 DC110010 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL166m10 BJ614143 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL169g17 BJ614792 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL172n19 BJ615626 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:7299723 CO385110 5' X. laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:6326773 CA974237 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6871062 CA983486 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6881084 CB208287 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL004e16 BJ030483 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL054j17 BJ069794 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL152h14 BJ096042 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3402140 BG037707 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
BG409710 BG409710 5' X. laevis.S Stage 10+ Gastrula Library whole organism NF stage 10 to NF stage 10.5
IMAGE:4203134 BG553177 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4684039 BQ733220 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5572832 BQ734185 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5542167 BQ735414 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6633156 BU907865 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5154784 CA792000 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3744064 BF427330 5' X. laevis.S Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3749252 BF614852 5' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
IMAGE:4061519 BG019104 5' X. laevis.S Cho Li treated gastrula whole organism NF stage 10 to NF stage 12.5
PBX0044C12 AW636233 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0088D04 AW639853 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3199748 AW767262 5' X. laevis.S Harland stage 19-23 whole organism NF stage 19 to NF stage 23
IMAGE:3300547 BE131771 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3744062 BF427329 5' X. laevis.S Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
XL517i14ex BP738772 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxl254c08 DC075382 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl231h05 DC069001 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL152h14 BJ100373 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL166m10 BJ630812 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL169g17 BJ631490 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL172n19 BJ632252 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:6881084 CB560121 3' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL002m20 BJ045018 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL004e16 BJ045472 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3421249 BG414036 3' X. laevis.S Wellcome CRC pSK St 10 5 whole organism NF stage 10.5
IMAGE:4203134 BG579778 3' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3744062 BG016725 3' X. laevis.S Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3402140 BG019698 3' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3749252 BG021387 3' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
IMAGE:3750471 BG021560 3' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
IMAGE:4061519 BG022350 3' X. laevis.S Cho Li treated gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:3300547 BE027023 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage