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Summary Expression Phenotypes Gene Literature (0) GO Terms (0) Nucleotides (183) Proteins (66) Interactants (21) Wiki
XB-GENEPAGE-958271

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for trafd1 - All

Models - Gene (34)
Models - mRNA (42)
mRNAs (16)
ESTs (33)

Models - Gene (34)

Source Version Model Species
NCBI 10.0 XBXT10g005476 X. tropicalis
NCBI 10.1 XBXL10_1g2874 X. laevis.L
NCBI 10.1 XBXL10_1g5416 X. laevis.S
ENSEMBL 10.0 trafd1 X. tropicalis
JGI 9.1 Xelaev18007865m.g X. laevis.L
JGI 9.1 Xelaev18010672m.g X. laevis.S
Xenbase 9.1 gene33641 X. tropicalis
Xenbase 9.2 gene13917 X. laevis.L
Xenbase 9.2 gene6645 X. laevis.S
ENSEMBL 9.1 trafd1 X. tropicalis
JGI 8.0 Xetrov14001016m.g X. tropicalis
JGI 7.1 Xetro.A00640 X. tropicalis
JGI 7.2 Xelaev16034000m.g X. laevis.L
JGI 6.0 XeXenL6RMv10021759m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000026235 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_566000012 X. tropicalis
JGI 4.1 e_gw1.566.37.1 X. tropicalis
JGI 4.1 e_gw1.566.38.1 X. tropicalis
JGI 4.1 e_gw1.566.4.1 X. tropicalis
JGI 4.1 gw1.566.37.1 X. tropicalis
JGI 4.1 gw1.566.38.1 X. tropicalis
JGI 4.1 gw1.566.4.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5660008 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5660004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5660037 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5660038 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5660003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5660012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5660013 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5660005 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_566000002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_566000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_566000013 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_566000005 X. tropicalis

Models - mRNA (42)

Source Version Model Species
NCBI 10.0 mRNA027182 X. tropicalis
NCBI 10.1 XBmRNA5130 X. laevis.L
NCBI 10.1 XBmRNA10104 X. laevis.S
ENSEMBL 10.0 ENSXETT00000075073 X. tropicalis
ENSEMBL 10.0 ENSXETT00000055430 X. tropicalis
ENSEMBL 10.0 ENSXETT00000087036 X. tropicalis
JGI 9.1 Xelaev18007865m X. laevis.L
JGI 9.1 Xelaev18010672m X. laevis.S
Xenbase 9.1 rna63367 X. tropicalis
Xenbase 9.2 rna40520 X. laevis.L
Xenbase 9.2 rna19451 X. laevis.S
ENSEMBL 9.1 ENSXETT00000075073 X. tropicalis
ENSEMBL 9.1 ENSXETT00000055430 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079940 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087036 X. tropicalis
JGI 8.0 Xetrov14001016m X. tropicalis
JGI 7.1 Xetro.A00640.2 X. tropicalis
JGI 7.1 Xetro.A00640.1 X. tropicalis
JGI 7.1 Xetro.A00640.4 X. tropicalis
JGI 7.1 Xetro.A00640.3 X. tropicalis
JGI 7.2 Xelaev16034000m X. laevis.L
JGI 6.0 XeXenL6RMv10021759m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_566000012 X. tropicalis
ENSEMBL 4.1 ENSXETT00000055430 X. tropicalis
JGI 4.1 e_gw1.566.37.1 X. tropicalis
JGI 4.1 e_gw1.566.38.1 X. tropicalis
JGI 4.1 e_gw1.566.4.1 X. tropicalis
JGI 4.1 gw1.566.37.1 X. tropicalis
JGI 4.1 gw1.566.38.1 X. tropicalis
JGI 4.1 gw1.566.4.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5660008 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5660004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5660037 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5660038 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5660003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5660012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5660013 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5660005 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_566000002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_566000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_566000013 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_566000005 X. tropicalis

mRNAs (16)

Clone Accession Species Library Anatomy Stage
NM_001004989 X. tropicalis
TEgg001d16 CR942471 X. tropicalis
IMAGE:6992200 BC075550 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7554933 BC161309 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
NM_001244843 X. tropicalis
XM_018092226 X. tropicalis
CX960166 X. tropicalis
CF240952 X. tropicalis
AL866399 X. tropicalis
AL865760 X. tropicalis
XR_004221854 X. tropicalis
XM_018263559 X. laevis.L
XM_018263548 X. laevis.L
XM_041580381 X. laevis.S
XM_041580380 X. laevis.S
XM_041580379 X. laevis.S

ESTs (33)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:6992200 CF240952 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7605175 CX412283 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7577668 CX423641 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CAAO10714 CX960167 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8916592 EL830107 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
TGas027p01 AL647202 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7529190 CX426147 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7670281 CX877032 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7706416 CX958737 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7550542 CX509672 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7554933 CX501602 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6989643 CF219609 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6989643 CF219610 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
CAAO10714 CX960166 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8916592 EL830108 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7577668 CX423640 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7550542 CX509671 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7706416 CX958736 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7554933 CX501601 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6992200 CF240951 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:4677790 BI314675 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6869494 CA980848 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6868639 CA982284 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
XL013k13 BJ029828 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL021p16 BJ035391 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGp998C029022 BX851292 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
PBX0085G07 AW639683 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3744697 BF426627 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3436982 BF613398 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:5278743 BQ398700 3' X. laevis.L Soares NXEG egg unfertilized egg stage
XL021p16 BJ050013 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL013k13 BJ044542 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3744697 BG234482 3' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage