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Summary Anatomy Item Literature (9667) Expression Attributions Wiki
XB-ANAT-110

Papers associated with germ cell (and atr)

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Resection of DNA double-strand breaks activates Mre11-Rad50-Nbs1- and Rad9-Hus1-Rad1-dependent mechanisms that redundantly promote ATR checkpoint activation and end processing in Xenopus egg extracts., Tatsukawa K., Nucleic Acids Res. February 13, 2024;


APE1 recruits ATRIP to ssDNA in an RPA-dependent and -independent manner to promote the ATR DNA damage response., Lin Y., Elife. May 22, 2023; 12


MRN-dependent and independent pathways for recruitment of TOPBP1 to DNA double-strand breaks., Montales K., PLoS One. August 2, 2022; 17 (8): e0271905.                


The p97 segregase cofactor Ubxn7 facilitates replisome disassembly during S-phase., Tarcan Z., J Biol Chem. August 1, 2022; 298 (8): 102234.                          


Delineation of a minimal topoisomerase II binding protein 1 for regulated activation of ATR at DNA double-strand breaks., Ruis K., J Biol Chem. July 1, 2022; 298 (7): 101992.            


Inhibition of DNA replication initiation by silver nanoclusters., Tao Y., Nucleic Acids Res. May 21, 2021; 49 (9): 5074-5083.                        


Structure-function analysis of TOPBP1's role in ATR signaling using the DSB-mediated ATR activation in Xenopus egg extracts (DMAX) system., Montales K., Sci Rep. January 11, 2021; 11 (1): 467.                


Distinct roles of XRCC1 in genome integrity in Xenopus egg extracts., Cupello S., Biochem J. December 23, 2019; 476 (24): 3791-3804.                


RPA-coated single-stranded DNA promotes the ETAA1-dependent activation of ATR., Lyu K., Cell Cycle. April 1, 2019; 18 (8): 898-913.              


Mitotic CDK Promotes Replisome Disassembly, Fork Breakage, and Complex DNA Rearrangements., Deng L., Mol Cell. March 7, 2019; 73 (5): 915-929.e6.                              


TRAIP is a master regulator of DNA interstrand crosslink repair., Wu RA., Nature. March 1, 2019; 567 (7747): 267-272.                          


Claspin - checkpoint adaptor and DNA replication factor., Smits VAJ., FEBS J. February 1, 2019; 286 (3): 441-455.


Methods for Studying DNA Single-Strand Break Repair and Signaling in Xenopus laevis Egg Extracts., Lin Y., Methods Mol Biol. January 1, 2019; 1999 161-172.


APE2 promotes DNA damage response pathway from a single-strand break., Lin Y., Nucleic Acids Res. March 16, 2018; 46 (5): 2479-2494.                


HELLS and CDCA7 comprise a bipartite nucleosome remodeling complex defective in ICF syndrome., Jenness C., Proc Natl Acad Sci U S A. January 30, 2018; 115 (5): E876-E885.                                


Reversal of DDK-Mediated MCM Phosphorylation by Rif1-PP1 Regulates Replication Initiation and Replisome Stability Independently of ATR/Chk1., Alver RC., Cell Rep. March 7, 2017; 18 (10): 2508-2520.                


APE2 Zf-GRF facilitates 3'-5' resection of DNA damage following oxidative stress., Wallace BD., Proc Natl Acad Sci U S A. January 10, 2017; 114 (2): 304-309.


Xenopus egg extract to study regulation of genome-wide and locus-specific DNA replication., Raspelli E., Genesis. January 1, 2017; 55 (1-2):       


Replication, checkpoint suppression and structure of centromeric DNA., Romeo F., Nucleus. November 1, 2016; 7 (6): 540-546.


Mdc1 modulates the interaction between TopBP1 and the MRN complex during DNA damage checkpoint responses., Choi SH., Biochem Biophys Res Commun. October 7, 2016; 479 (1): 5-11.


Xenopus Mcm10 is a CDK-substrate required for replication fork stability., Chadha GS., Cell Cycle. August 17, 2016; 15 (16): 2183-2195.            


Non-homologous end joining repair in Xenopus egg extract., Zhu S., Sci Rep. June 21, 2016; 6 27797.            


Direct Binding to Replication Protein A (RPA)-coated Single-stranded DNA Allows Recruitment of the ATR Activator TopBP1 to Sites of DNA Damage., Acevedo J., J Biol Chem. June 17, 2016; 291 (25): 13124-31.


Centromeric DNA replication reconstitution reveals DNA loops and ATR checkpoint suppression., Aze A., Nat Cell Biol. June 1, 2016; 18 (6): 684-91.        


REV1 is important for the ATR-Chk1 DNA damage response pathway in Xenopus egg extracts., DeStephanis D., Biochem Biophys Res Commun. May 8, 2015; 460 (3): 609-15.


14-3-3 proteins restrain the Exo1 nuclease to prevent overresection., Chen X., J Biol Chem. May 8, 2015; 290 (19): 12300-12.    


Optogenetic manipulation of cGMP in cells and animals by the tightly light-regulated guanylyl-cyclase opsin CyclOp., Gao S., Nat Commun. January 19, 2015; 6 8046.            


Importin β-dependent nuclear import of TopBP1 in ATR-Chk1 checkpoint in Xenopus egg extracts., Bai L., Cell Signal. May 1, 2014; 26 (5): 857-67.


DNA polymerase κ-dependent DNA synthesis at stalled replication forks is important for CHK1 activation., Bétous R., EMBO J. July 31, 2013; 32 (15): 2172-85.                


APE2 is required for ATR-Chk1 checkpoint activation in response to oxidative stress., Willis J., Proc Natl Acad Sci U S A. June 25, 2013; 110 (26): 10592-7.


The Mre11-Rad50-Nbs1 (MRN) complex has a specific role in the activation of Chk1 in response to stalled replication forks., Lee J., Mol Biol Cell. May 1, 2013; 24 (9): 1343-53.          


Mcm8 and Mcm9 form a dimeric complex in Xenopus laevis egg extract that is not essential for DNA replication initiation., Gambus A., Cell Cycle. April 15, 2013; 12 (8): 1225-32.                


A role for the MRN complex in ATR activation via TOPBP1 recruitment., Duursma AM., Mol Cell. April 11, 2013; 50 (1): 116-22.


SUMO2/3 modification of cyclin E contributes to the control of replication origin firing., Bonne-Andrea C., Nat Commun. January 1, 2013; 4 1850.        


Study of the DNA damage checkpoint using Xenopus egg extracts., Willis J., J Vis Exp. November 5, 2012; (69): e4449.


Drosophila Claspin is required for the G2 arrest that is induced by DNA replication stress but not by DNA double-strand breaks., Lee EM., DNA Repair (Amst). September 1, 2012; 11 (9): 741-52.


Fanconi anemia proteins FANCD2 and FANCI exhibit different DNA damage responses during S-phase., Sareen A., Nucleic Acids Res. September 1, 2012; 40 (17): 8425-39.          


Role of replication protein A as sensor in activation of the S-phase checkpoint in Xenopus egg extracts., Recolin B., Nucleic Acids Res. April 1, 2012; 40 (8): 3431-42.        


Role for Rif1 in the checkpoint response to damaged DNA in Xenopus egg extracts., Kumar S., Cell Cycle. March 15, 2012; 11 (6): 1183-94.


Cdk1 uncouples CtIP-dependent resection and Rad51 filament formation during M-phase double-strand break repair., Peterson SE., J Cell Biol. September 5, 2011; 194 (5): 705-20.              


Essential roles of Xenopus TRF2 in telomere end protection and replication., Muraki K., Genes Cells. June 1, 2011; 16 (6): 728-39.


Phosphorylation of Claspin is triggered by the nucleocytoplasmic ratio at the Xenopus laevis midblastula transition., Gotoh T., Dev Biol. May 15, 2011; 353 (2): 302-8.          


Replication-fork stalling and processing at a single psoralen interstrand crosslink in Xenopus egg extracts., Le Breton C., PLoS One. April 15, 2011; 6 (4): e18554.          


A new in vitro system for activating the cell cycle checkpoint., Wang J., Cell Cycle. February 1, 2011; 10 (3): 500-6.


CtIP interacts with TopBP1 and Nbs1 in the response to double-stranded DNA breaks (DSBs) in Xenopus egg extracts., Ramírez-Lugo JS., Cell Cycle. February 1, 2011; 10 (3): 469-80.


A novel role for greatwall kinase in recovery from DNA damage., Peng A., Cell Cycle. November 1, 2010; 9 (21): 4364-9.


Deregulated Cdc6 inhibits DNA replication and suppresses Cdc7-mediated phosphorylation of Mcm2-7 complex., Kundu LR., Nucleic Acids Res. September 1, 2010; 38 (16): 5409-18.              


Continued primer synthesis at stalled replication forks contributes to checkpoint activation., Van C., J Cell Biol. April 19, 2010; 189 (2): 233-46.              


Rad17 plays a central role in establishment of the interaction between TopBP1 and the Rad9-Hus1-Rad1 complex at stalled replication forks., Lee J, Lee J., Mol Biol Cell. March 15, 2010; 21 (6): 926-35.            


Atrazine induces complete feminization and chemical castration in male African clawed frogs (Xenopus laevis)., Hayes TB., Proc Natl Acad Sci U S A. March 9, 2010; 107 (10): 4612-7.            

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