Papers associated with deep (and chrd.1)

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	Cell lineage-guided mass spectrometry reveals increased energy metabolism and reactive oxygen species in the vertebrate organizer., Baxi AB., Proc Natl Acad Sci U S A. February 6, 2024; 121 (6): e2311625121.
	Targeted search for scaling genes reveals matrixmetalloproteinase 3 as a scaler of the dorsal-ventral pattern in Xenopus laevis embryos., Orlov EE., Dev Cell. January 10, 2022; 57 (1): 95-111.e12.
	dmrt2 and myf5 Link Early Somitogenesis to Left-Right Axis Determination in Xenopus laevis., Tingler M., Front Cell Dev Biol. January 1, 2022; 10 858272.
	Rab7 is required for mesoderm patterning and gastrulation in Xenopus., Kreis J., Biol Open. July 15, 2021; 10 (7):
	Furry is required for cell movements during gastrulation and functionally interacts with NDR1., Cervino AS., Sci Rep. March 23, 2021; 11 (1): 6607.
	Genome-wide analysis of dorsal and ventral transcriptomes of the Xenopus laevis gastrula., Ding Y., Dev Biol. June 15, 2017; 426 (2): 176-187.
	Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula transition., Wagner G., PLoS Genet. May 12, 2017; 13 (5): e1006757.
	Ror2 signaling is required for local upregulation of GDF6 and activation of BMP signaling at the neural plate border., Schille C., Development. September 1, 2016; 143 (17): 3182-94.
	G protein-coupled receptors Flop1 and Flop2 inhibit Wnt/β-catenin signaling and are essential for head formation in Xenopus., Miyagi A., Dev Biol. November 1, 2015; 407 (1): 131-44.
	FoxA4 favours notochord formation by inhibiting contiguous mesodermal fates and restricts anterior neural development in Xenopus embryos., Murgan S., PLoS One. January 1, 2014; 9 (10): e110559.
	Xenopus laevis nucleotide binding protein 1 (xNubp1) is important for convergent extension movements and controls ciliogenesis via regulation of the actin cytoskeleton., Ioannou A., Dev Biol. August 15, 2013; 380 (2): 243-58.
	Suv4-20h histone methyltransferases promote neuroectodermal differentiation by silencing the pluripotency-associated Oct-25 gene., Nicetto D., PLoS Genet. January 1, 2013; 9 (1): e1003188.
	Sizzled-tolloid interactions maintain foregut progenitors by regulating fibronectin-dependent BMP signaling., Kenny AP., Dev Cell. August 14, 2012; 23 (2): 292-304.
	Maternal xNorrin, a canonical Wnt signaling agonist and TGF-β antagonist, controls early neuroectoderm specification in Xenopus., Xu S., PLoS Biol. January 1, 2012; 10 (3): e1001286.
	Snail2 controls mesodermal BMP/Wnt induction of neural crest., Shi J., Development. August 1, 2011; 138 (15): 3135-45.
	Expression of Transposable Elements in Neural Tissues during Xenopus Development., Faunes F., PLoS One. January 1, 2011; 6 (7): e22569.
	Evolutionary origin of the Otx2 enhancer for its expression in visceral endoderm., Kurokawa D., Dev Biol. June 1, 2010; 342 (1): 110-20.
	The Wnt antagonists Frzb-1 and Crescent locally regulate basement membrane dissolution in the developing primary mouth., Dickinson AJ., Development. April 1, 2009; 136 (7): 1071-81.
	Regulation of TGF-(beta) signalling by N-acetylgalactosaminyltransferase-like 1., Herr P., Development. May 1, 2008; 135 (10): 1813-22.
	Xenopus glucose transporter 1 (xGLUT1) is required for gastrulation movement in Xenopus laevis., Suzawa K., Int J Dev Biol. January 1, 2007; 51 (3): 183-90.
	Metastasis-associated kinase modulates Wnt signaling to regulate brain patterning and morphogenesis., Kibardin A., Development. August 1, 2006; 133 (15): 2845-54.
	Nodal-related gene Xnr5 is amplified in the Xenopus genome., Takahashi S., Genesis. July 1, 2006; 44 (7): 309-21.
	Integrin alpha5beta1 and fibronectin regulate polarized cell protrusions required for Xenopus convergence and extension., Davidson LA, Davidson LA., Curr Biol. May 9, 2006; 16 (9): 833-44.
	Cooperative non-cell and cell autonomous regulation of Nodal gene expression and signaling by Lefty/Antivin and Brachyury in Xenopus., Cha YR., Dev Biol. February 15, 2006; 290 (2): 246-64.
	Xenopus hairy2b specifies anterior prechordal mesoderm identity within Spemann's organizer., Yamaguti M., Dev Dyn. September 1, 2005; 234 (1): 102-13.
	Inhibition of mesodermal fate by Xenopus HNF3beta/FoxA2., Suri C., Dev Biol. January 1, 2004; 265 (1): 90-104.
	Xrx1 controls proliferation and neurogenesis in Xenopus anterior neural plate., Andreazzoli M., Development. November 1, 2003; 130 (21): 5143-54.
	Notch activates sonic hedgehog and both are involved in the specification of dorsal midline cell-fates in Xenopus., López SL., Development. May 1, 2003; 130 (10): 2225-38.
	The planar cell polarity gene strabismus regulates convergence and extension and neural fold closure in Xenopus., Goto T., Dev Biol. July 1, 2002; 247 (1): 165-81.
	Molecular cloning and expression study of Xenopus latent TGF-beta binding protein-1 (LTBP-1)., Quarto N., Gene. May 15, 2002; 290 (1-2): 53-61.
	Xenopus Cdc42 regulates convergent extension movements during gastrulation through Wnt/Ca2+ signaling pathway., Choi SC., Dev Biol. April 15, 2002; 244 (2): 342-57.
	Overexpression of the secreted factor Mig30 expressed in the Spemann organizer impairs morphogenetic movements during Xenopus gastrulation., Hayata T., Mech Dev. March 1, 2002; 112 (1-2): 37-51.
	Overexpression of camello, a member of a novel protein family, reduces blastomere adhesion and inhibits gastrulation in Xenopus laevis., Popsueva AE., Dev Biol. June 15, 2001; 234 (2): 483-96.
	foxD5a, a Xenopus winged helix gene, maintains an immature neural ectoderm via transcriptional repression that is dependent on the C-terminal domain., Sullivan SA., Dev Biol. April 15, 2001; 232 (2): 439-57.
	Designation of the anterior/posterior axis in pregastrula Xenopus laevis., Lane MC., Dev Biol. September 1, 2000; 225 (1): 37-58.
	A direct screen for secreted proteins in Xenopus embryos identifies distinct activities for the Wnt antagonists Crescent and Frzb-1., Pera EM., Mech Dev. September 1, 2000; 96 (2): 183-95.
	Hex is a transcriptional repressor that contributes to anterior identity and suppresses Spemann organiser function., Brickman JM., Development. June 1, 2000; 127 (11): 2303-15.
	The lefty-related factor Xatv acts as a feedback inhibitor of nodal signaling in mesoderm induction and L-R axis development in xenopus., Cheng AM., Development. March 1, 2000; 127 (5): 1049-61.
	Anterior endomesoderm specification in Xenopus by Wnt/beta-catenin and TGF-beta signalling pathways., Zorn AM., Dev Biol. May 15, 1999; 209 (2): 282-97.
	Frizzled-8 is expressed in the Spemann organizer and plays a role in early morphogenesis., Deardorff MA., Development. July 1, 1998; 125 (14): 2687-700.
	Differential regulation of chordin expression domains in mutant zebrafish., Miller-Bertoglio VE., Dev Biol. December 15, 1997; 192 (2): 537-50.
	Sizzled: a secreted Xwnt8 antagonist expressed in the ventral marginal zone of Xenopus embryos., Salic AN., Development. December 1, 1997; 124 (23): 4739-48.
	Animal and vegetal pole cells of early Xenopus embryos respond differently to maternal dorsal determinants: implications for the patterning of the organiser., Darras S., Development. November 1, 1997; 124 (21): 4275-86.
	Combinatorial signalling by Xwnt-11 and Xnr3 in the organizer epithelium., Glinka A., Mech Dev. December 1, 1996; 60 (2): 221-31.

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