Papers associated with whole organism (and zic3)

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	Altering metabolite distribution at Xenopus cleavage stages affects left-right gene expression asymmetries., Onjiko RM., Genesis. June 1, 2021; 59 (5-6): e23418.
	Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates., Bright AR., EMBO J. May 3, 2021; 40 (9): e104913.
	Characterising open chromatin in chick embryos identifies cis-regulatory elements important for paraxial mesoderm formation and axis extension., Mok GF., Nat Commun. February 19, 2021; 12 (1): 1157.
	Dusp1 modulates activin/smad2 mediated germ layer specification via FGF signal inhibition in Xenopus embryos., Umair Z., Anim Cells Syst (Seoul). November 27, 2020; 24 (6): 359-370.
	Natural size variation among embryos leads to the corresponding scaling in gene expression., Leibovich A., Dev Biol. June 15, 2020; 462 (2): 165-179.
	Trpc1 as the Missing Link Between the Bmp and Ca2+ Signalling Pathways During Neural Specification in Amphibians., Néant I., Sci Rep. November 5, 2019; 9 (1): 16049.
	Bighead is a Wnt antagonist secreted by the Xenopus Spemann organizer that promotes Lrp6 endocytosis., Ding Y., Proc Natl Acad Sci U S A. September 25, 2018; 115 (39): E9135-E9144.
	The atypical mitogen-activated protein kinase ERK3 is essential for establishment of epithelial architecture., Takahashi C., J Biol Chem. June 1, 2018; 293 (22): 8342-8361.
	Spemann organizer transcriptome induction by early beta-catenin, Wnt, Nodal, and Siamois signals in Xenopus laevis., Ding Y., Proc Natl Acad Sci U S A. April 11, 2017; 114 (15): E3081-E3090.
	The positive transcriptional elongation factor (P-TEFb) is required for neural crest specification., Hatch VL., Dev Biol. August 15, 2016; 416 (2): 361-72.
	E2a is necessary for Smad2/3-dependent transcription and the direct repression of lefty during gastrulation., Wills AE., Dev Cell. February 9, 2015; 32 (3): 345-57.
	PV.1 induced by FGF-Xbra functions as a repressor of neurogenesis in Xenopus embryos., Yoon J., BMB Rep. December 1, 2014; 47 (12): 673-8.
	Global identification of Smad2 and Eomesodermin targets in zebrafish identifies a conserved transcriptional network in mesendoderm and a novel role for Eomesodermin in repression of ectodermal gene expression., Nelson AC., BMC Biol. October 3, 2014; 12 81.
	Two different network topologies yield bistability in models of mesoderm and anterior mesendoderm specification in amphibians., Brown LE., J Theor Biol. July 21, 2014; 353 67-77.
	PV.1 suppresses the expression of FoxD5b during neural induction in Xenopus embryos., Yoon J., Mol Cells. March 1, 2014; 37 (3): 220-5.
	ERF and ETV3L are retinoic acid-inducible repressors required for primary neurogenesis., Janesick A., Development. August 1, 2013; 140 (15): 3095-106.
	WNK4 is an essential effector of anterior formation in FGF signaling., Shimizu M., Genes Cells. June 1, 2013; 18 (6): 442-9.
	Conserved structural domains in FoxD4L1, a neural forkhead box transcription factor, are required to repress or activate target genes., Klein SL., PLoS One. April 4, 2013; 8 (4): e61845.
	Suv4-20h histone methyltransferases promote neuroectodermal differentiation by silencing the pluripotency-associated Oct-25 gene., Nicetto D., PLoS Genet. January 1, 2013; 9 (1): e1003188.
	A developmental requirement for HIRA-dependent H3.3 deposition revealed at gastrulation in Xenopus., Szenker E., Cell Rep. June 28, 2012; 1 (6): 730-40.
	Specific domains of FoxD4/5 activate and repress neural transcription factor genes to control the progression of immature neural ectoderm to differentiating neural plate., Neilson KM., Dev Biol. May 15, 2012; 365 (2): 363-75.
	Early neural crest induction requires an initial inhibition of Wnt signals., Steventon B., Dev Biol. May 1, 2012; 365 (1): 196-207.
	An essential and highly conserved role for Zic3 in left-right patterning, gastrulation and convergent extension morphogenesis., Cast AE., Dev Biol. April 1, 2012; 364 (1): 22-31.
	TAK1 promotes BMP4/Smad1 signaling via inhibition of erk MAPK: a new link in the FGF/BMP regulatory network., Liu C., Differentiation. April 1, 2012; 83 (4): 210-9.
	Xenopus Zic3 controls notochord and organizer development through suppression of the Wnt/β-catenin signaling pathway., Fujimi TJ., Dev Biol. January 15, 2012; 361 (2): 220-31.
	Geminin is required for zygotic gene expression at the Xenopus mid-blastula transition., Kerns SL., PLoS One. January 1, 2012; 7 (5): e38009.
	xCITED2 Induces Neural Genes in Animal Cap Explants of Xenopus Embryos., Yoon J., Exp Neurobiol. September 1, 2011; 20 (3): 123-9.
	Role of BMP, FGF, calcium signaling, and Zic proteins in vertebrate neuroectodermal differentiation., Aruga J., Neurochem Res. July 1, 2011; 36 (7): 1286-92.
	MIM regulates vertebrate neural tube closure., Liu W., Development. May 1, 2011; 138 (10): 2035-47.
	SNW1 is a critical regulator of spatial BMP activity, neural plate border formation, and neural crest specification in vertebrate embryos., Wu MY., PLoS Biol. February 15, 2011; 9 (2): e1000593.
	Transdifferentiation from cornea to lens in Xenopus laevis depends on BMP signalling and involves upregulation of Wnt signalling., Day RC., BMC Dev Biol. January 26, 2011; 11 54.
	The RNA-binding protein Xp54nrb isolated from a Ca²+-dependent screen is expressed in neural structures during Xenopus laevis development., Neant I., Int J Dev Biol. January 1, 2011; 55 (10-12): 923-31.
	Prohibitin1 acts as a neural crest specifier in Xenopus development by repressing the transcription factor E2F1., Schneider M., Development. December 1, 2010; 137 (23): 4073-81.
	BMP inhibition initiates neural induction via FGF signaling and Zic genes., Marchal L., Proc Natl Acad Sci U S A. October 13, 2009; 106 (41): 17437-42.
	FGF-activated calcium channels control neural gene expression in Xenopus., Lee KW., Biochim Biophys Acta. June 1, 2009; 1793 (6): 1033-40.
	foxD5 plays a critical upstream role in regulating neural ectodermal fate and the onset of neural differentiation., Yan B., Dev Biol. May 1, 2009; 329 (1): 80-95.
	Elucidation of penetrance variability of a ZIC3 mutation in a family with complex heart defects and functional analysis of ZIC3 mutations in the first zinc finger domain., Chhin B., Hum Mutat. June 1, 2007; 28 (6): 563-70.
	Emerging roles for zic genes in early development., Merzdorf CS., Dev Dyn. April 1, 2007; 236 (4): 922-40.
	Negative regulation of Activin/Nodal signaling by SRF during Xenopus gastrulation., Yun CH., Development. February 1, 2007; 134 (4): 769-77.
	Craniofacial, skeletal, and cardiac defects associated with altered embryonic murine Zic3 expression following targeted insertion of a PGK-NEO cassette., Zhu L., Front Biosci. January 1, 2007; 12 1680-90.
	The role of XBtg2 in Xenopus neural development., Sugimoto K., Dev Neurosci. January 1, 2007; 29 (6): 468-79.
	Xenopus Zic4: conservation and diversification of expression profiles and protein function among the Xenopus Zic family., Fujimi TJ., Dev Dyn. December 1, 2006; 235 (12): 3379-86.
	Novel gene ashwin functions in Xenopus cell survival and anteroposterior patterning., Patil SS., Dev Dyn. July 1, 2006; 235 (7): 1895-907.
	Pbx1 and Meis1 regulate activity of the Xenopus laevis Zic3 promoter through a highly conserved region., Kelly LE., Biochem Biophys Res Commun. June 9, 2006; 344 (3): 1031-7.
	Heart defects in X-linked heterotaxy: evidence for a genetic interaction of Zic3 with the nodal signaling pathway., Ware SM., Dev Dyn. June 1, 2006; 235 (6): 1631-7.
	A dominant-negative form of the E3 ubiquitin ligase Cullin-1 disrupts the correct allocation of cell fate in the neural crest lineage., Voigt J., Development. February 1, 2006; 133 (3): 559-68.
	Maternal Xenopus Zic2 negatively regulates Nodal-related gene expression during anteroposterior patterning., Houston DW., Development. November 1, 2005; 132 (21): 4845-55.
	The Ca2+-induced methyltransferase xPRMT1b controls neural fate in amphibian embryo., Batut J., Proc Natl Acad Sci U S A. October 18, 2005; 102 (42): 15128-33.
	Expression cloning screening of a unique and full-length set of cDNA clones is an efficient method for identifying genes involved in Xenopus neurogenesis., Voigt J., Mech Dev. March 1, 2005; 122 (3): 289-306.
	Systematic screening for genes specifically expressed in the anterior neuroectoderm during early Xenopus development., Takahashi N., Int J Dev Biol. January 1, 2005; 49 (8): 939-51.

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