Papers associated with embryonic structure (and shh)

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	Mechanical Tensions Regulate Gene Expression in the Xenopus laevis Axial Tissues., Eroshkin FM., Int J Mol Sci. January 10, 2024; 25 (2):
	Using Xenopus to discover new candidate genes involved in BOR and other congenital hearing loss syndromes., Neal SJ., J Exp Zool B Mol Dev Evol. October 13, 2023;
	Normal Table of Xenopus development: a new graphical resource., Zahn N., Development. July 15, 2022; 149 (14):
	Cilia-localized GID/CTLH ubiquitin ligase complex regulates protein homeostasis of sonic hedgehog signaling components., Hantel F., J Cell Sci. May 1, 2022; 135 (9):
	Targeted search for scaling genes reveals matrixmetalloproteinase 3 as a scaler of the dorsal-ventral pattern in Xenopus laevis embryos., Orlov EE., Dev Cell. January 10, 2022; 57 (1): 95-111.e12.
	Nodal asymmetry and hedgehog signaling during vertebrate left-right symmetry breaking., Negretti MI., Front Cell Dev Biol. January 1, 2022; 10 957211.
	Tbx5 drives Aldh1a2 expression to regulate a RA-Hedgehog-Wnt gene regulatory network coordinating cardiopulmonary development., Rankin SA, Rankin SA., Elife. October 13, 2021; 10
	Rab7 is required for mesoderm patterning and gastrulation in Xenopus., Kreis J., Biol Open. July 15, 2021; 10 (7):
	Protocadherin-1 is expressed in the notochord of mouse embryo but is dispensable for its formation., Fukunaga K., Biochem Biophys Rep. June 15, 2021; 27 101047.
	Pinhead antagonizes Admp to promote notochord formation., Itoh K., iScience. May 7, 2021; 24 (6): 102520.
	A temporally resolved transcriptome for developing "Keller" explants of the Xenopus laevis dorsal marginal zone., Kakebeen AD., Dev Dyn. May 1, 2021; 250 (5): 717-731.
	Thyroid hormone-induced expression of Foxl1 in subepithelial fibroblasts correlates with adult stem cell development during Xenopus intestinal remodeling., Hasebe T., Sci Rep. November 26, 2020; 10 (1): 20715.
	TMEM79/MATTRIN defines a pathway for Frizzled regulation and is required for Xenopus embryogenesis., Chen M., Elife. September 14, 2020; 9
	Isl1 Regulation of Nkx2.1 in the Early Foregut Epithelium Is Required for Trachea-Esophageal Separation and Lung Lobation., Kim E., Dev Cell. December 16, 2019; 51 (6): 675-683.e4.
	Endosome-Mediated Epithelial Remodeling Downstream of Hedgehog-Gli Is Required for Tracheoesophageal Separation., Nasr T., Dev Cell. December 16, 2019; 51 (6): 665-674.e6.
	Barhl2 maintains T cell factors as repressors and thereby switches off the Wnt/β-Catenin response driving Spemann organizer formation., Sena E., Development. May 22, 2019; 146 (10):
	A dual function of FGF signaling in Xenopus left-right axis formation., Schneider I., Development. May 10, 2019; 146 (9):
	Xenopus slc7a5 is essential for notochord function and eye development., Katada T., Mech Dev. February 1, 2019; 155 48-59.
	Gli2 is required for the induction and migration of Xenopus laevis neural crest., Cerrizuela S., Mech Dev. December 1, 2018; 154 219-239.
	WDR5 regulates left-right patterning via chromatin-dependent and -independent functions., Kulkarni SS., Development. November 28, 2018; 145 (23):
	Evolutionarily conserved Tbx5-Wnt2/2b pathway orchestrates cardiopulmonary development., Steimle JD., Proc Natl Acad Sci U S A. November 6, 2018; 115 (45): E10615-E10624.
	Divergent axial morphogenesis and early shh expression in vertebrate prospective floor plate., Kremnyov S., Evodevo. January 31, 2018; 9 4.
	Evolutionary Proteomics Uncovers Ancient Associations of Cilia with Signaling Pathways., Sigg MA., Dev Cell. December 18, 2017; 43 (6): 744-762.e11.
	A molecular atlas of the developing ectoderm defines neural, neural crest, placode, and nonneural progenitor identity in vertebrates., Plouhinec JL., PLoS Biol. October 19, 2017; 15 (10): e2004045.
	Mouth development., Chen J., Wiley Interdiscip Rev Dev Biol. September 1, 2017; 6 (5):
	Folate-dependent methylation of septins governs ciliogenesis during neural tube closure., Toriyama M., FASEB J. August 1, 2017; 31 (8): 3622-3635.
	Identification of new regulators of embryonic patterning and morphogenesis in Xenopus gastrulae by RNA sequencing., Popov IK., Dev Biol. June 15, 2017; 426 (2): 429-441.
	Coordinating heart morphogenesis: A novel role for hyperpolarization-activated cyclic nucleotide-gated (HCN) channels during cardiogenesis in Xenopus laevis., Pitcairn E., Commun Integr Biol. May 10, 2017; 10 (3): e1309488.
	A novel role of the organizer gene Goosecoid as an inhibitor of Wnt/PCP-mediated convergent extension in Xenopus and mouse., Ulmer B., Sci Rep. February 21, 2017; 7 43010.
	Members of the Rusc protein family interact with Sufu and inhibit vertebrate Hedgehog signaling., Jin Z., Development. November 1, 2016; 143 (21): 3944-3955.
	An Evolutionarily Conserved Network Mediates Development of the zona limitans intrathalamica, a Sonic Hedgehog-Secreting Caudal Forebrain Signaling Center., Sena E., J Dev Biol. October 20, 2016; 4 (4):
	Hedgehog-dependent E3-ligase Midline1 regulates ubiquitin-mediated proteasomal degradation of Pax6 during visual system development., Pfirrmann T., Proc Natl Acad Sci U S A. September 6, 2016; 113 (36): 10103-8.
	A Retinoic Acid-Hedgehog Cascade Coordinates Mesoderm-Inducing Signals and Endoderm Competence during Lung Specification., Rankin SA, Rankin SA., Cell Rep. June 28, 2016; 16 (1): 66-78.
	Xenopus Limb bud morphogenesis., Keenan SR., Dev Dyn. March 1, 2016; 245 (3): 233-43.
	G protein-coupled receptors Flop1 and Flop2 inhibit Wnt/β-catenin signaling and are essential for head formation in Xenopus., Miyagi A., Dev Biol. November 1, 2015; 407 (1): 131-44.
	Gremlin1 induces anterior-posterior limb bifurcations in developing Xenopus limbs but does not enhance limb regeneration., Wang YH., Mech Dev. November 1, 2015; 138 Pt 3 256-67.
	Evidence for an amphibian sixth digit., Hayashi S., Zoological Lett. June 15, 2015; 1 17.
	At new heights - endodermal lineages in development and disease., Ober EA., Development. June 1, 2015; 142 (11): 1912-1917.
	ATP4 and ciliation in the neuroectoderm and endoderm of Xenopus embryos and tadpoles., Walentek P., Data Brief. April 20, 2015; 4 22-31.
	Dorsoventral patterning of the Xenopus eye involves differential temporal changes in the response of optic stalk and retinal progenitors to Hh signalling., Wang X., Neural Dev. March 20, 2015; 10 7.
	Patterns of hypothalamic regionalization in amphibians and reptiles: common traits revealed by a genoarchitectonic approach., Domínguez L., Front Neuroanat. February 3, 2015; 9 3.
	Prepatterning and patterning of the thalamus along embryonic development of Xenopus laevis., Bandín S., Front Neuroanat. February 3, 2015; 9 107.
	Early development of the neural plate: new roles for apoptosis and for one of its main effectors caspase-3., Juraver-Geslin HA., Genesis. February 1, 2015; 53 (2): 203-24.
	A Molecular atlas of Xenopus respiratory system development., Rankin SA, Rankin SA., Dev Dyn. January 1, 2015; 244 (1): 69-85.
	Hedgehog activity controls opening of the primary mouth., Tabler JM., Dev Biol. December 1, 2014; 396 (1): 1-7.
	The conserved barH-like homeobox-2 gene barhl2 acts downstream of orthodentricle-2 and together with iroquois-3 in establishment of the caudal forebrain signaling center induced by Sonic Hedgehog., Juraver-Geslin HA., Dev Biol. December 1, 2014; 396 (1): 107-20.
	Chibby functions in Xenopus ciliary assembly, embryonic development, and the regulation of gene expression., Shi J., Dev Biol. November 15, 2014; 395 (2): 287-98.
	Gene regulatory networks governing lung specification., Rankin SA, Rankin SA., J Cell Biochem. August 1, 2014; 115 (8): 1343-50.
	Sulf1 influences the Shh morphogen gradient during the dorsal ventral patterning of the neural tube in Xenopus tropicalis., Ramsbottom SA., Dev Biol. July 15, 2014; 391 (2): 207-18.
	Transit amplification in the amniote cerebellum evolved via a heterochronic shift in NeuroD1 expression., Butts T., Development. July 1, 2014; 141 (14): 2791-5.

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