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XB-IMG-79890

Xenbase Image ID: 79890


Fig. 7. Expression patterns of Xenopus orthologues to human genes with multiple BREs. Of the 26 representative orthologues from the 80 genes with available annotation in Xenopus, the expression patterns of 19 genes were analyzed by whole mount in situ hybridization. Expression patterns are organized based on the behavior of each gene in the RT-PCR experiments shown in Table 1 (strong, weak, no change, no data, not examined). Not shown are Id3 (Fig. 3) and BMP2 (Nishimatsu et al., 1992). Shown are the patterns at the neurula and tailbud stages for each gene; refer to Table 1 for a description of each pattern at the gastrula stage. Unless otherwise indicated, for neurula stages, anterior is to the left and dorsal is up. For tailbud stages, lateral views are shown.

Image published in: von Bubnoff A et al. (2005)

Copyright © 2005. Image reproduced with permission of the Publisher, Elsevier B. V.

GeneSynonymsSpeciesStage(s)Tissue
prkd1.Lpkd, pkcm, prkcm, pkc-mu, protein kinase C, muX. laevisThroughout NF stage 20mesoderm
lateral plate mesoderm
intermediate mesoderm
cranial neural crest
prkd1.Lpkd, pkcm, prkcm, pkc-mu, protein kinase C, muX. laevisThroughout NF stage 29 and 30pharyngeal arch
mandibular arch
hyoid arch
branchial arch
pronephric kidney
pronephric duct
otic vesicle
head region
roof plate
csnk2a1.SX. laevisThroughout NF stage 18pre-chordal neural plate
chordal neural plate
csnk2a1.SX. laevisThroughout NF stage 29 and 30pharyngeal arch
mandibular arch
hyoid arch
branchial arch
otic vesicle
eye
brain
forebrain
midbrain
hindbrain
spinal cord
olfm4.LtiarinX. laevisThroughout NF stage 20cranial neural crest
olfm4.LtiarinX. laevisThroughout NF stage 28mandibular arch
hyoid arch
proctodeum
prkca.Lpkcalpha, pkc-alpha, pkc-like 2, XPKCIX. laevisThroughout NF stage 18dorsal
prkca.Lpkcalpha, pkc-alpha, pkc-like 2, XPKCIX. laevisThroughout NF stage 28head region
fst.Lxfs, follistatin, follX. laevisThroughout NF stage 18floor plate
chordal neural plate
fst.Lxfs, follistatin, follX. laevisThroughout NF stage 33 and 34pronephric kidney
pronephric duct
otic vesicle
midbrain
hindbrain
spinal cord
diencephalon
visceral pouch
dach1.SdachX. laevisThroughout NF stage 20lateral plate mesoderm
intermediate mesoderm
mesoderm
dach1.SdachX. laevisThroughout NF stage 28hyoid arch
retina
midbrain
pineal gland
hindbrain
foregut
ptpn3.SX. laevisThroughout NF stage 18pre-chordal neural plate
chordal neural plate
lateral plate mesoderm
intermediate mesoderm
dorsal
ptpn3.SX. laevisThroughout NF stage 29 and 30chordal neural plate
otic vesicle
forebrain
midbrain
aadat.Saminoadipate aminotransferase, kat2, katiiX. laevisThroughout NF stage 18otic vesicle
dorsal
neural plate
mesoderm
aadat.Saminoadipate aminotransferase, kat2, katiiX. laevisThroughout NF stage 33 and 34otic vesicle
forebrain
intersomitic region
eye
pharyngeal arch
branchial arch
pronephric kidney
pronephric duct
glomus
roof plate
lateral plate mesoderm
snrpe.Lsme, sm-e, b-rafX. laevisThroughout NF stage 18pre-chordal neural plate
cranial neural crest
optic field
snrpe.Lsme, sm-e, b-rafX. laevisThroughout NF stage 28pharyngeal arch
hyoid arch
branchial arch
lateral plate mesoderm
otic vesicle
eye
forebrain
hindbrain
retina
dlx5.Ldll3, X-dll3X. laevisThroughout NF stage 18preplacodal ectoderm
anterior placodal area
posterior placodal area
neural crest
dlx5.Ldll3, X-dll3X. laevisThroughout NF stage 28pharyngeal arch
mandibular arch
hyoid arch
branchial arch
otic vesicle
dorsal fin margin
ventral fin margin
hatching gland
forebrain
diencephalon
stk3.Smst2, xstk3X. laevisThroughout NF stage 18mesoderm
lateral plate mesoderm
intermediate mesoderm
dorsal
stk3.Smst2, xstk3X. laevisThroughout NF stage 29 and 30dorsal fin
zeb2.Szfhx1b, smad interaction protein 1, XSip1, sip1, XZfhx1bX. laevisThroughout NF stage 14 to NF stage 15pre-chordal neural plate
chordal neural plate
zeb2.Szfhx1b, smad interaction protein 1, XSip1, sip1, XZfhx1bX. laevisThroughout NF stage 29 and 30eye
pronephric mesenchyme
cranial placode
epibranchial placode
facial epibranchial placode
lateral line placode
hindbrain
spinal cord
ammecr1.Lammerc1X. laevisThroughout NF stage 18pre-chordal neural plate
chordal neural plate
ammecr1.Lammerc1X. laevisThroughout NF stage 29 and 30pharyngeal arch
branchial arch
pronephric duct
otic vesicle
eye
brain
spinal cord
kansl2.Sflj20436X. laevisThroughout NF stage 18pre-chordal neural plate
optic field
cranial neural crest
kansl2.Sflj20436X. laevisThroughout NF stage 29 and 30pharyngeal arch
branchial arch
pronephric kidney
pronephric duct
otic vesicle
eye
forebrain
spinal cord
sall1.Ltbs, sal1, sal-1, znf794, spalt-like 1, sall1b, sal-like 1, sall1-a, sall1-bX. laevisThroughout NF stage 18floor plate
posterior placodal area
sall1.Ltbs, sal1, sal-1, znf794, spalt-like 1, sall1b, sal-like 1, sall1-a, sall1-bX. laevisThroughout NF stage 33 and 34otic vesicle
eye
tail bud
midbrain
midbrain-hindbrain boundary
lens
dorsal fin
epibranchial placode
spdl1.Lflj20364, spindlyX. laevisThroughout NF stage 18chordal neural plate
trigeminal placode
lrrn1.Lxnlrr-1, nlrr-1, figler3, nlrr-6, XlNLRR-6, lrrn1-a, lrrn1-bX. laevisThroughout NF stage 18pre-chordal neural plate
chordal neural plate
optic field
cranial neural crest
wnt11.SWnt11-R, Wnt11r, WNT11-related, wnt11aX. laevisThroughout NF stage 20pre-chordal neural plate
chordal neural plate
neural crest
trunk neural crest
lrrn1.Lxnlrr-1, nlrr-1, figler3, nlrr-6, XlNLRR-6, lrrn1-a, lrrn1-bX. laevisThroughout NF stage 28pharyngeal arch
branchial arch
lateral plate mesoderm
otic vesicle
eye
proctodeum
forebrain
hindbrain
roof plate
cardinal vein
spdl1.Lflj20364, spindlyX. laevisThroughout NF stage 29 and 30pharyngeal arch
branchial arch
pronephric kidney
otic vesicle
forebrain
midbrain
hindbrain
spinal cord
ciliary marginal zone
roof plate
wnt11.SWnt11-R, Wnt11r, WNT11-related, wnt11aX. laevisThroughout NF stage 28pharyngeal arch
otic vesicle
midbrain
hindbrain
spinal cord
visceral pouch
heart

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