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Summary Anatomy Item Literature (649) Expression Attributions Wiki
XB-ANAT-299

Papers associated with deep

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Comparative Analysis of Cartilage Marker Gene Expression Patterns during Axolotl and Xenopus Limb Regeneration., Mitogawa K., PLoS One. July 16, 2015; 10 (7): e0133375.                  


Regulation of the Rev1-pol ζ complex during bypass of a DNA interstrand cross-link., Budzowska M., EMBO J. July 14, 2015; 34 (14): 1971-85.


Deconstructing cartilage shape and size into contributions from embryogenesis, metamorphosis, and tadpole and frog growth., Rose CS., J Anat. June 1, 2015; 226 (6): 575-95.


The dynamics of plus end polarization and microtubule assembly during Xenopus cortical rotation., Olson DJ., Dev Biol. May 15, 2015; 401 (2): 249-63.                


Quantum dot assisted tracking of the intracellular protein Cyclin E in Xenopus laevis embryos., Brandt YI., J Nanobiotechnology. April 29, 2015; 13 31.          


Leptin Manipulation Reduces Appetite and Causes a Switch in Mating Preference in the Plains Spadefoot Toad (Spea bombifrons)., Garcia NW., PLoS One. April 22, 2015; 10 (4): e0125981.    


The desensitization gate of inhibitory Cys-loop receptors., Gielen M., Nat Commun. April 20, 2015; 6 6829.              


Cellular analysis of cleavage-stage chick embryos reveals hidden conservation in vertebrate early development., Nagai H., Development. April 1, 2015; 142 (7): 1279-86.      


The serpin PN1 is a feedback regulator of FGF signaling in germ layer and primary axis formation., Acosta H., Development. March 15, 2015; 142 (6): 1146-58.                                    


lncRNA-MFDL: identification of human long non-coding RNAs by fusing multiple features and using deep learning., Fan XN., Mol Biosyst. March 1, 2015; 11 (3): 892-7.


Biological and biochemical properties of two Xenopus laevis N-acetylgalactosaminyltransferases with contrasting roles in embryogenesis., Voglmeir J., Comp Biochem Physiol B Biochem Mol Biol. February 1, 2015; 180 40-7.          


Microarray identification of novel genes downstream of Six1, a critical factor in cranial placode, somite, and kidney development., Yan B., Dev Dyn. February 1, 2015; 244 (2): 181-210.                          


Regulation of ECM degradation and axon guidance by growth cone invadosomes., Santiago-Medina M., Development. February 1, 2015; 142 (3): 486-96.                        


Ca-α1T, a fly T-type Ca2+ channel, negatively modulates sleep., Jeong K., Sci Rep. January 12, 2015; 5 17893.            


tRFdb: a database for transfer RNA fragments., Kumar P., Nucleic Acids Res. January 1, 2015; 43 (Database issue): D141-5.    


The horizontal brain slice preparation: a novel approach for visualizing and recording from all layers of the tadpole tectum., Hamodi AS., J Neurophysiol. January 1, 2015; 113 (1): 400-7.


Xenopus in Space and Time: Fossils, Node Calibrations, Tip-Dating, and Paleobiogeography., Cannatella D., Cytogenet Genome Res. January 1, 2015; .


Xenopus Nkx6.3 is a neural plate border specifier required for neural crest development., Zhang Z., PLoS One. December 15, 2014; 9 (12): e115165.            


Transcriptional regulators in the Hippo signaling pathway control organ growth in Xenopus tadpole tail regeneration., Hayashi S., Dev Biol. December 1, 2014; 396 (1): 31-41.                      


Analyzing developmental sequences with Parsimov--a case study of cranial muscle development in anuran larvae., Ziermann JM., J Exp Zool B Mol Dev Evol. December 1, 2014; 322 (8): 586-606.


Capturing distinct KCNQ2 channel resting states by metal ion bridges in the voltage-sensor domain., Gourgy-Hacohen O., J Gen Physiol. December 1, 2014; 144 (6): 513-27.                  


Role for endocytosis of a constitutively active GPCR (GPR185) in releasing vertebrate oocyte meiotic arrest., Nader N., Dev Biol. November 15, 2014; 395 (2): 355-66.          


Evidence from simultaneous intracellular- and surface-pH transients that carbonic anhydrase II enhances CO2 fluxes across Xenopus oocyte plasma membranes., Musa-Aziz R., Am J Physiol Cell Physiol. November 1, 2014; 307 (9): C791-813.


Gating of the kir2.1 channel at the bundle crossing region by intracellular spermine and other cations., Huang CW., J Cell Physiol. November 1, 2014; 229 (11): 1703-21.


Getting to know your neighbor: cell polarization in early embryos., Nance J., J Cell Biol. September 29, 2014; 206 (7): 823-32.          


Global absolute quantification reveals tight regulation of protein expression in single Xenopus eggs., Smits AH., Nucleic Acids Res. September 1, 2014; 42 (15): 9880-91.        


Impaired liver function in Xenopus tropicalis exposed to benzo[a]pyrene: transcriptomic and metabolic evidence., Regnault C., BMC Genomics. August 8, 2014; 15 666.          


Reproducibility and consistency of in vitro nucleosome reconstitutions demonstrated by invitrosome isolation and sequencing., Kempton CE., PLoS One. August 5, 2014; 9 (8): e103752.                


Structural basis of nucleoside and nucleoside drug selectivity by concentrative nucleoside transporters., Johnson ZL., Elife. July 31, 2014; 3 e03604.                        


A hydrophobic barrier deep within the inner pore of the TWIK-1 K2P potassium channel., Aryal P., Nat Commun. July 8, 2014; 5 4377.                


Deep proteomics of the Xenopus laevis egg using an mRNA-derived reference database., Wühr M., Curr Biol. July 7, 2014; 24 (13): 1467-1475.          


Conserved microRNA editing in mammalian evolution, development and disease., Warnefors M., Genome Biol. June 25, 2014; 15 (6): R83.          


GEF-H1 functions in apical constriction and cell intercalations and is essential for vertebrate neural tube closure., Itoh K., J Cell Sci. June 1, 2014; 127 (Pt 11): 2542-53.              


Stochastic specification of primordial germ cells from mesoderm precursors in axolotl embryos., Chatfield J., Development. June 1, 2014; 141 (12): 2429-40.              


Ectopic blastema induction by nerve deviation and skin wounding: a new regeneration model in Xenopus laevis., Mitogawa K., Regeneration (Oxf). May 28, 2014; 1 (2): 26-36.            


Selective modulation of cellular voltage-dependent calcium channels by hyperbaric pressure-a suggested HPNS partial mechanism., Aviner B., Front Cell Neurosci. May 27, 2014; 8 136.                    


Microvascularization and histomorphology of lateral line organs in adult Xenopus laevis., Gerlach N., J Morphol. May 1, 2014; 275 (5): 497-503.


Polarized Wnt signaling regulates ectodermal cell fate in Xenopus., Huang YL., Dev Cell. April 28, 2014; 29 (2): 250-7.                  


Chromatin immunoprecipitation and deep sequencing in Xenopus tropicalis and Xenopus laevis., Wills AE., Methods. April 1, 2014; 66 (3): 410-21.


Xenopus embryonic epidermis as a mucociliary cellular ecosystem to assess the effect of sex hormones in a non-reproductive context., Castillo-Briceno P., Front Zool. February 6, 2014; 11 (1): 9.                


Mitotic spindle assembly on chromatin patterns made with deep UV photochemistry., Tarnawska K., Methods Cell Biol. January 1, 2014; 120 3-17.


Biomechanics and the thermotolerance of development., von Dassow M., PLoS One. January 1, 2014; 9 (4): e95670.            


Cell adhesion in zebrafish embryos is modulated by March 8., Kim MH., PLoS One. January 1, 2014; 9 (4): e94873.            


FoxA4 favours notochord formation by inhibiting contiguous mesodermal fates and restricts anterior neural development in Xenopus embryos., Murgan S., PLoS One. January 1, 2014; 9 (10): e110559.                              


FAK transduces extracellular forces that orient the mitotic spindle and control tissue morphogenesis., Petridou NI., Nat Commun. January 1, 2014; 5 5240.      


ERK and phosphoinositide 3-kinase temporally coordinate different modes of actin-based motility during embryonic wound healing., Li J., J Cell Sci. November 1, 2013; 126 (Pt 21): 5005-17.              


Bicaudal-C spatially controls translation of vertebrate maternal mRNAs., Zhang Y, Zhang Y., RNA. November 1, 2013; 19 (11): 1575-82.


Regulation of neurogenesis by Fgf8a requires Cdc42 signaling and a novel Cdc42 effector protein., Hulstrand AM., Dev Biol. October 15, 2013; 382 (2): 385-99.                              


Par6b regulates the dynamics of apicobasal polarity during development of the stratified Xenopus epidermis., Wang S., PLoS One. October 8, 2013; 8 (10): e76854.                      


Cell segregation, mixing, and tissue pattern in the spinal cord of the Xenopus laevis neurula., Edlund AF., Dev Dyn. October 1, 2013; 242 (10): 1134-46.  

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