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Summary Anatomy Item Literature (2127) Expression Attributions Wiki
XB-ANAT-3747

Papers associated with cytoplasm

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Optogenetic Control of the Canonical Wnt Signaling Pathway During Xenopus laevis Embryonic Development., Krishnamurthy VV., J Mol Biol. September 3, 2021; 433 (18): 167050.


Cryosectioning and Immunostaining of Xenopus Embryonic Tissues., Ossipova O., Cold Spring Harb Protoc. September 1, 2021; 2021 (9): pdb.prot107151.


The Transcription Factor NF-κB in Stem Cells and Development., Kaltschmidt C., Cells. August 10, 2021; 10 (8):       


ZC3HC1 Is a Novel Inherent Component of the Nuclear Basket, Resident in a State of Reciprocal Dependence with TPR., Gunkel P., Cells. July 30, 2021; 10 (8):               


A novel class III endogenous retrovirus with a class I envelope gene in African frogs with an intact genome and developmentally regulated transcripts in Xenopus tropicalis., Yedavalli VRK., Retrovirology. July 14, 2021; 18 (1): 20.              


Xenopus laevis Egg Extract Preparation and Live Imaging Methods for Visualizing Dynamic Cytoplasmic Organization., Cheng X., J Vis Exp. June 6, 2021; (172):


Voltage-clamp fluorometry analysis of structural rearrangements of ATP-gated channel P2X2 upon hyperpolarization., Andriani RT., Elife. May 19, 2021; 10                                     


Isolation and characterization of bone marrow-derived mesenchymal stem cells in Xenopus laevis., Otsuka-Yamaguchi R., Stem Cell Res. May 1, 2021; 53 102341.          


Protocol for separation of the nuclear and the cytoplasmic fractions of Xenopus laevis embryonic cells for studying protein shuttling., Martynova NY., STAR Protoc. April 21, 2021; 2 (2): 100449.


The Xenopus spindle is as dense as the surrounding cytoplasm., Biswas A., Dev Cell. April 5, 2021; 56 (7): 967-975.e5.                  


Local body weight measurement of the spindle., Tanaka M., Dev Cell. April 5, 2021; 56 (7): 871-872.  


Identification of a unique endoplasmic retention motif in the Xenopus GIRK5 channel and its contribution to oocyte maturation., Rangel-Garcia CI., FEBS Open Bio. April 1, 2021; 11 (4): 1093-1108.            


FAX-RIC enables robust profiling of dynamic RNP complex formation in multicellular organisms in vivo., Na Y., Nucleic Acids Res. March 18, 2021; 49 (5): e28.            


Biallelic variants in COPB1 cause a novel, severe intellectual disability syndrome with cataracts and variable microcephaly., Macken WL., Genome Med. February 25, 2021; 13 (1): 34.            


The carboxy terminal coiled-coil modulates Orai1 internalization during meiosis., Hodeify R., Sci Rep. January 27, 2021; 11 (1): 2290.                


Otic Neurogenesis in Xenopus laevis: Proliferation, Differentiation, and the Role of Eya1., Almasoudi SH., Front Neuroanat. January 1, 2021; 15 722374.                                                    


Spindle Scaling Is Governed by Cell Boundary Regulation of Microtubule Nucleation., Rieckhoff EM., Curr Biol. December 21, 2020; 30 (24): 4973-4983.e10.            


The nucleus serves as the pacemaker for the cell cycle., Afanzar O., Elife. December 7, 2020; 9           


Co-movement of astral microtubules, organelles and F-actin by dynein and actomyosin forces in frog egg cytoplasm., Pelletier JF., Elife. December 7, 2020; 9                         


DAAM2 Variants Cause Nephrotic Syndrome via Actin Dysregulation., Schneider R., Am J Hum Genet. December 3, 2020; 107 (6): 1113-1128.


Functional partitioning of a liquid-like organelle during assembly of axonemal dyneins., Lee C, Lee C., Elife. December 2, 2020; 9                             


Dact-4 is a Xenopus laevis Spemann organizer gene related to the Dapper/Frodo antagonist of β-catenin family of proteins., Colozza G., Gene Expr Patterns. December 1, 2020; 38 119153.                        


Recent evolution of a TET-controlled and DPPA3/STELLA-driven pathway of passive DNA demethylation in mammals., Mulholland CB., Nat Commun. November 24, 2020; 11 (1): 5972.                


De novo mutations in FBRSL1 cause a novel recognizable malformation and intellectual disability syndrome., Ufartes R., Hum Genet. November 1, 2020; 139 (11): 1363-1379.                                        


A systematic, label-free method for identifying RNA-associated proteins in vivo provides insights into vertebrate ciliary beating machinery., Drew K., Dev Biol. November 1, 2020; 467 (1-2): 108-117.                    


Organelle size scaling over embryonic development., Wesley CC., Wiley Interdiscip Rev Dev Biol. September 1, 2020; 9 (5): e376.            


Paired Box 9 (PAX9), the RNA polymerase II transcription factor, regulates human ribosome biogenesis and craniofacial development., Farley-Barnes KI., PLoS Genet. August 19, 2020; 16 (8): e1008967.                                    


4-Hydroxynonenal induces Cx46 hemichannel inhibition through its carbonylation., Retamal MA., Biochim Biophys Acta Mol Cell Biol Lipids. August 1, 2020; 1865 (8): 158705.


Interplay of TRIM2 E3 Ubiquitin Ligase and ALIX/ESCRT Complex: Control of Developmental Plasticity During Early Neurogenesis., Lokapally A., Cells. July 20, 2020; 9 (7):                                           


Functional analysis of the OsNPF4.5 nitrate transporter reveals a conserved mycorrhizal pathway of nitrogen acquisition in plants., Wang S., Proc Natl Acad Sci U S A. July 14, 2020; 117 (28): 16649-16659.            


Calmodulin-Cork Model of Gap Junction Channel Gating-One Molecule, Two Mechanisms., Peracchia C., Int J Mol Sci. July 13, 2020; 21 (14):                                 


FERM domain-containing protein 6 identifies a subpopulation of varicose nerve fibers in different vertebrate species., Beck J., Cell Tissue Res. July 1, 2020; 381 (1): 13-24.                            


MicroRNA-708 modulates Hepatic Stellate Cells activation and enhances extracellular matrix accumulation via direct targeting TMEM88., Xu T., J Cell Mol Med. July 1, 2020; 24 (13): 7127-7140.              


Long-term association of a transcription factor with its chromatin binding site can stabilize gene expression and cell fate commitment., Gurdon JB., Proc Natl Acad Sci U S A. June 30, 2020; 117 (26): 15075-15084.            


Tug-of-war between actomyosin-driven antagonistic forces determines the positioning symmetry in cell-sized confinement., Sakamoto R., Nat Commun. June 15, 2020; 11 (1): 3063.            


Molecular architecture of the luminal ring of the Xenopus laevis nuclear pore complex., Zhang Y., Cell Res. June 1, 2020; 30 (6): 532-540.                                


A Generalizable Optogenetic Strategy to Regulate Receptor Tyrosine Kinases during Vertebrate Embryonic Development., Krishnamurthy VV., J Mol Biol. May 1, 2020; 432 (10): 3149-3158.


The Spindle Assembly Checkpoint Functions during Early Development in Non-Chordate Embryos., Chenevert J., Cells. April 28, 2020; 9 (5):               


Centering and symmetry breaking in confined contracting actomyosin networks., Ierushalmi N., Elife. April 21, 2020; 9                         


HDAC inhibition induces expression of scaffolding proteins critical for tumor progression in pediatric glioma: focus on EBP50 and IRSp53., Capdevielle C., Neuro Oncol. April 15, 2020; 22 (4): 550-562.


Stable intronic sequence RNAs (sisRNAs) are selected regions in introns with distinct properties., Jin J., BMC Genomics. April 7, 2020; 21 (1): 287.                                


The Actin-Family Protein Arp4 Is a Novel Suppressor for the Formation and Functions of Nuclear F-Actin., Yamazaki S., Cells. March 19, 2020; 9 (3):           


Tethered peptide neurotoxins display two blocking mechanisms in the K+ channel pore as do their untethered analogs., Zhao R., Sci Adv. March 4, 2020; 6 (10): eaaz3439.


The regulatory proteins DSCR6 and Ezh2 oppositely regulate Stat3 transcriptional activity in mesoderm patterning during Xenopus development., Loreti M., J Biol Chem. February 28, 2020; 295 (9): 2724-2735.                


A doublecortin-domain protein of Toxoplasma and its orthologues bind to and modify the structure and organization of tubulin polymers., Leung JM., BMC Mol Cell Biol. February 28, 2020; 21 (1): 8.                        


Ashwin Gene Expression Profiles in Oocytes, Preimplantation Embryos, and Fetal and Adult Bovine Tissues., Moreno-Brito V., Animals (Basel). February 11, 2020; 10 (2):         


Cardiac telocytes exist in the adult Xenopus tropicalis heart., Lv L., J Cell Mol Med. February 1, 2020; 24 (4): 2531-2541.                            


An optochemical tool for light-induced dissociation of adherens junctions to control mechanical coupling between cells., Ollech D., Nat Commun. January 24, 2020; 11 (1): 472.                                  


Hydrogen Sulfide Impairs Meiosis Resumption in Xenopuslaevis Oocytes., Gelaude A., Cells. January 17, 2020; 9 (1):                   


"Lost and Found": snoRNA Annotation in the Xenopus Genome and Implications for Evolutionary Studies., Deryusheva S., Mol Biol Evol. January 1, 2020; 37 (1): 149-166.                                                        

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