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Summary Anatomy Item Literature (1651) Expression Attributions Wiki
XB-ANAT-58

Papers associated with somite (and tbxt)

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ZSWIM4 regulates embryonic patterning and BMP signaling by promoting nuclear Smad1 degradation., Wang C., EMBO Rep. February 1, 2024; 25 (2): 646-671.                                          

Mechanical Tensions Regulate Gene Expression in the Xenopus laevis Axial Tissues., Eroshkin FM., Int J Mol Sci. January 10, 2024; 25 (2):         

Gene expression in notochord and nuclei pulposi: a study of gene families across the chordate phylum., Raghavan R., BMC Ecol Evol. October 27, 2023; 23 (1): 63.                            

Purine Biosynthesis Pathways Are Required for Myogenesis in Xenopus laevis., Duperray M., Cells. September 28, 2023; 12 (19):               

Membrane potential drives the exit from pluripotency and cell fate commitment via calcium and mTOR., Sempou E., Nat Commun. November 5, 2022; 13 (1): 6681.                                            

FGF-mediated establishment of left-right asymmetry requires Rab7 function in the dorsal mesoderm in Xenopus., Kreis J., Front Cell Dev Biol. January 1, 2022; 10 981762.                  

The enpp4 ectonucleotidase regulates kidney patterning signalling networks in Xenopus embryos., Massé K., Commun Biol. October 7, 2021; 4 (1): 1158.                                

BMP signaling is enhanced intracellularly by FHL3 controlling WNT-dependent spatiotemporal emergence of the neural crest., Alkobtawi M., Cell Rep. June 22, 2021; 35 (12): 109289.                        

The cytokine FAM3B/PANDER is an FGFR ligand that promotes posterior development in Xenopus., Zhang F., Proc Natl Acad Sci U S A. May 18, 2021; 118 (20):           

Kindlin2 regulates neural crest specification via integrin-independent regulation of the FGF signaling pathway., Wang H., Development. May 15, 2021; 148 (10):                                           

Furry is required for cell movements during gastrulation and functionally interacts with NDR1., Cervino AS., Sci Rep. March 23, 2021; 11 (1): 6607.                                  

Evolution of Somite Compartmentalization: A View From Xenopus., Della Gaspera B., Front Cell Dev Biol. January 1, 2021; 9 790847.                  

Pinhead signaling regulates mesoderm heterogeneity via the FGF receptor-dependent pathway., Ossipova O., Development. September 11, 2020; 147 (17):                 

Brachyury in the gastrula of basal vertebrates., Bruce AEE., Mech Dev. September 1, 2020; 163 103625.                  

Chromatin accessibility and histone acetylation in the regulation of competence in early development., Esmaeili M., Dev Biol. June 1, 2020; 462 (1): 20-35.                

Pinhead signaling regulates mesoderm heterogeneity via FGF receptor-dependent pathway., Ossipova O., Development. January 1, 2020;                                       

A dual function of FGF signaling in Xenopus left-right axis formation., Schneider I., Development. May 10, 2019; 146 (9):                               

Nucleotide receptor P2RY4 is required for head formation via induction and maintenance of head organizer in Xenopus laevis., Harata A., Dev Growth Differ. February 1, 2019; 61 (2): 186-197.                                

Cdc42 Effector Protein 3 Interacts With Cdc42 in Regulating Xenopus Somite Segmentation., Kho M., Front Physiol. January 1, 2019; 10 542.          

The extraordinary biology and development of marsupial frogs (Hemiphractidae) in comparison with fish, mammals, birds, amphibians and other animals., Del Pino EM., Mech Dev. December 1, 2018; 154 2-11.        

RARγ is required for mesodermal gene expression prior to gastrulation in Xenopus., Janesick A., Development. September 17, 2018; 145 (18):                           

An Early Function of Polycystin-2 for Left-Right Organizer Induction in Xenopus., Vick P., iScience. April 27, 2018; 2 76-85.                                        

Ketamine Modulates Zic5 Expression via the Notch Signaling Pathway in Neural Crest Induction., Shi Y, Shi Y., Front Mol Neurosci. February 7, 2018; 11 9.          

Candidate Heterotaxy Gene FGFR4 Is Essential for Patterning of the Left-Right Organizer in Xenopus., Sempou E., Front Physiol. January 1, 2018; 9 1705.              

Xenopus pitx3 target genes lhx1 and xnr5 are identified using a novel three-fluor flow cytometry-based analysis of promoter activation and repression., Hooker LN., Dev Dyn. September 1, 2017; 246 (9): 657-669.                    

Coordinating heart morphogenesis: A novel role for hyperpolarization-activated cyclic nucleotide-gated (HCN) channels during cardiogenesis in Xenopus laevis., Pitcairn E., Commun Integr Biol. May 10, 2017; 10 (3): e1309488.                            

Spemann organizer transcriptome induction by early beta-catenin, Wnt, Nodal, and Siamois signals in Xenopus laevis., Ding Y., Proc Natl Acad Sci U S A. April 11, 2017; 114 (15): E3081-E3090.                        

Nemo-like kinase 1 (Nlk1) and paraxial protocadherin (PAPC) cooperatively control Xenopus gastrulation through regulation of Wnt/planar cell polarity (PCP) signaling., Kumar R., Differentiation. January 1, 2017; 93 27-38.                            

Involvement of JunB Proto-Oncogene in Tail Formation During Early Xenopus Embryogenesis., Yoshida H., Zoolog Sci. June 1, 2016; 33 (3): 282-9.  

Measuring Absolute RNA Copy Numbers at High Temporal Resolution Reveals Transcriptome Kinetics in Development., Owens ND., Cell Rep. January 26, 2016; 14 (3): 632-47.                                                  

Expression pattern of bcar3, a downstream target of Gata2, and its binding partner, bcar1, during Xenopus development., Green YS., Gene Expr Patterns. January 1, 2016; 20 (1): 55-62.                  

Kruppel-like factor family genes are expressed during Xenopus embryogenesis and involved in germ layer formation and body axis patterning., Gao Y., Dev Dyn. October 1, 2015; 244 (10): 1328-46.                                    

Paraxis is required for somite morphogenesis and differentiation in Xenopus laevis., Sánchez RS., Dev Dyn. August 1, 2015; 244 (8): 973-87.                              

Mesodermal origin of median fin mesenchyme and tail muscle in amphibian larvae., Taniguchi Y., Sci Rep. June 18, 2015; 5 11428.                

On the origin of vertebrate somites., Onai T., Zoological Lett. June 15, 2015; 1 33.              

The alternative splicing regulator Tra2b is required for somitogenesis and regulates splicing of an inhibitory Wnt11b isoform., Dichmann DS., Cell Rep. February 3, 2015; 10 (4): 527-36.                    

Development of the vertebrate tailbud., Beck CW., Wiley Interdiscip Rev Dev Biol. January 1, 2015; 4 (1): 33-44.        

Xenopus laevis FGF receptor substrate 3 (XFrs3) is important for eye development and mediates Pax6 expression in lens placode through its Shp2-binding sites., Kim YJ., Dev Biol. January 1, 2015; 397 (1): 129-39.                                          

The PDZ domain protein Mcc is a novel effector of non-canonical Wnt signaling during convergence and extension in zebrafish., Young T., Development. September 1, 2014; 141 (18): 3505-16.        

Occupancy of tissue-specific cis-regulatory modules by Otx2 and TLE/Groucho for embryonic head specification., Yasuoka Y., Nat Commun. July 9, 2014; 5 4322.        

Calpain2 protease: A new member of the Wnt/Ca(2+) pathway modulating convergent extension movements in Xenopus., Zanardelli S., Dev Biol. December 1, 2013; 384 (1): 83-100.                        

Dhrs3 protein attenuates retinoic acid signaling and is required for early embryonic patterning., Kam RK., J Biol Chem. November 1, 2013; 288 (44): 31477-87.                    

Directional migration of leading-edge mesoderm generates physical forces: Implication in Xenopus notochord formation during gastrulation., Hara Y., Dev Biol. October 15, 2013; 382 (2): 482-95.                  

In vivo T-box transcription factor profiling reveals joint regulation of embryonic neuromesodermal bipotency., Gentsch GE., Cell Rep. September 26, 2013; 4 (6): 1185-96.                              

MRAS GTPase is a novel stemness marker that impacts mouse embryonic stem cell plasticity and Xenopus embryonic cell fate., Mathieu ME., Development. August 1, 2013; 140 (16): 3311-22.              

VEGFA-dependent and -independent pathways synergise to drive Scl expression and initiate programming of the blood stem cell lineage in Xenopus., Ciau-Uitz A., Development. June 1, 2013; 140 (12): 2632-42.                                                                                                                            

Lin28 proteins are required for germ layer specification in Xenopus., Faas L., Development. March 1, 2013; 140 (5): 976-86.                      

An intact brachyury function is necessary to prevent spurious axial development in Xenopus laevis., Aguirre CE., PLoS One. January 1, 2013; 8 (1): e54777.                                      

Comparative Functional Analysis of ZFP36 Genes during Xenopus Development., Tréguer K., PLoS One. January 1, 2013; 8 (1): e54550.                          

Transcriptional regulation of mesoderm genes by MEF2D during early Xenopus development., Kolpakova A., PLoS One. January 1, 2013; 8 (7): e69693.                  

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