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Summary Anatomy Item Literature (11042) Expression Attributions Wiki
XB-ANAT-717

Papers associated with anatomical direction (and shh)

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Mechanical Tensions Regulate Gene Expression in the Xenopus laevis Axial Tissues., Eroshkin FM., Int J Mol Sci. January 10, 2024; 25 (2):         


An archetype and scaling of developmental tissue dynamics across species., Morishita Y., Nat Commun. December 11, 2023; 14 (1): 8199.                              


The shh limb enhancer is activated in patterned limb regeneration but not in hypomorphic limb regeneration in Xenopus laevis., Tada R., Dev Biol. May 27, 2023; 500 22-30.                        


Normal Table of Xenopus development: a new graphical resource., Zahn N., Development. July 15, 2022; 149 (14):                         


Cilia-localized GID/CTLH ubiquitin ligase complex regulates protein homeostasis of sonic hedgehog signaling components., Hantel F., J Cell Sci. May 1, 2022; 135 (9):                                     


Zic5 stabilizes Gli3 via a non-transcriptional mechanism during retinal development., Sun J., Cell Rep. February 1, 2022; 38 (5): 110312.                                          


Acute multidrug delivery via a wearable bioreactor facilitates long-term limb regeneration and functional recovery in adult Xenopus laevis., Murugan NJ., Sci Adv. January 28, 2022; 8 (4): eabj2164.            


Xbp1 and Brachyury establish an evolutionarily conserved subcircuit of the notochord gene regulatory network., Wu Y., Elife. January 20, 2022; 11                             


Targeted search for scaling genes reveals matrixmetalloproteinase 3 as a scaler of the dorsal-ventral pattern in Xenopus laevis embryos., Orlov EE., Dev Cell. January 10, 2022; 57 (1): 95-111.e12.                                


Nodal asymmetry and hedgehog signaling during vertebrate left-right symmetry breaking., Negretti MI., Front Cell Dev Biol. January 1, 2022; 10 957211.  


Tbx5 drives Aldh1a2 expression to regulate a RA-Hedgehog-Wnt gene regulatory network coordinating cardiopulmonary development., Rankin SA, Rankin SA., Elife. October 13, 2021; 10


Ttc30a affects tubulin modifications in a model for ciliary chondrodysplasia with polycystic kidney disease., Getwan M., Proc Natl Acad Sci U S A. September 28, 2021; 118 (39):                                                   


Foxm1 regulates neural progenitor fate during spinal cord regeneration., Pelzer D., EMBO Rep. September 6, 2021; 22 (9): e50932.                        


TGF-β1 signaling is essential for tissue regeneration in the Xenopus tadpole tail., Nakamura M., Biochem Biophys Res Commun. August 6, 2021; 565 91-96.          


Rab7 is required for mesoderm patterning and gastrulation in Xenopus., Kreis J., Biol Open. July 15, 2021; 10 (7):                                           


DLG5 variants are associated with multiple congenital anomalies including ciliopathy phenotypes., Marquez J., J Med Genet. July 1, 2021; 58 (7): 453-464.                        


Pinhead antagonizes Admp to promote notochord formation., Itoh K., iScience. May 7, 2021; 24 (6): 102520.                            


Non-canonical Hedgehog signaling regulates spinal cord and muscle regeneration in Xenopus laevis larvae., Hamilton AM., Elife. May 6, 2021; 10                               


A temporally resolved transcriptome for developing "Keller" explants of the Xenopus laevis dorsal marginal zone., Kakebeen AD., Dev Dyn. May 1, 2021; 250 (5): 717-731.              


Thyroid Hormone Receptor Is Essential for Larval Epithelial Apoptosis and Adult Epithelial Stem Cell Development but Not Adult Intestinal Morphogenesis during Xenopus tropicalis Metamorphosis., Shibata Y., Cells. March 3, 2021; 10 (3):                             


Xenopus leads the way: Frogs as a pioneering model to understand the human brain., Exner CRT., Genesis. February 1, 2021; 59 (1-2): e23405.          


Evolution of Somite Compartmentalization: A View From Xenopus., Della Gaspera B., Front Cell Dev Biol. January 1, 2021; 9 790847.                  


Amphibian thalamic nuclear organization during larval development and in the adult frog Xenopus laevis: Genoarchitecture and hodological analysis., Morona R., J Comp Neurol. October 1, 2020; 528 (14): 2361-2403.                                                                


TMEM79/MATTRIN defines a pathway for Frizzled regulation and is required for Xenopus embryogenesis., Chen M., Elife. September 14, 2020; 9                                                                                           


A simple and practical workflow for genotyping of CRISPR-Cas9-based knockout phenotypes using multiplexed amplicon sequencing., Iida M., Genes Cells. July 1, 2020; 25 (7): 498-509.                    


Isl1 Regulation of Nkx2.1 in the Early Foregut Epithelium Is Required for Trachea-Esophageal Separation and Lung Lobation., Kim E., Dev Cell. December 16, 2019; 51 (6): 675-683.e4.          


Endosome-Mediated Epithelial Remodeling Downstream of Hedgehog-Gli Is Required for Tracheoesophageal Separation., Nasr T., Dev Cell. December 16, 2019; 51 (6): 665-674.e6.                  


Cell type-specific transcriptome analysis unveils secreted signaling molecule genes expressed in apical epithelial cap during appendage regeneration., Okumura A., Dev Growth Differ. December 1, 2019; 61 (9): 447-456.                


Smoothened stimulation by membrane sterols drives Hedgehog pathway activity., Deshpande I., Nature. July 1, 2019; 571 (7764): 284-288.


Barhl2 maintains T cell factors as repressors and thereby switches off the Wnt/β-Catenin response driving Spemann organizer formation., Sena E., Development. May 22, 2019; 146 (10):                                             


A dual function of FGF signaling in Xenopus left-right axis formation., Schneider I., Development. May 10, 2019; 146 (9):                               


Developmental regulation of Wnt signaling by Nagk and the UDP-GlcNAc salvage pathway., Neitzel LR., Mech Dev. April 1, 2019; 156 20-31.                              


Xenopus slc7a5 is essential for notochord function and eye development., Katada T., Mech Dev. February 1, 2019; 155 48-59.                


Gli2 is required for the induction and migration of Xenopus laevis neural crest., Cerrizuela S., Mech Dev. December 1, 2018; 154 219-239.                      


WDR5 regulates left-right patterning via chromatin-dependent and -independent functions., Kulkarni SS., Development. November 28, 2018; 145 (23):                 


Evolutionarily conserved Tbx5-Wnt2/2b pathway orchestrates cardiopulmonary development., Steimle JD., Proc Natl Acad Sci U S A. November 6, 2018; 115 (45): E10615-E10624.                                  


Divergent axial morphogenesis and early shh expression in vertebrate prospective floor plate., Kremnyov S., Evodevo. January 31, 2018; 9 4.                    


Hyperinnervation improves Xenopus laevis limb regeneration., Mitogawa K., Dev Biol. January 15, 2018; 433 (2): 276-286.                    


Musashi and Plasticity of Xenopus and Axolotl Spinal Cord Ependymal Cells., Chernoff EAG., Front Cell Neurosci. January 1, 2018; 12 45.                          


Evolutionary Proteomics Uncovers Ancient Associations of Cilia with Signaling Pathways., Sigg MA., Dev Cell. December 18, 2017; 43 (6): 744-762.e11.      


Sonic hedgehog antagonists reduce size and alter patterning of the frog inner ear., Zarei S., Dev Neurobiol. December 1, 2017; 77 (12): 1385-1400.                


A molecular atlas of the developing ectoderm defines neural, neural crest, placode, and nonneural progenitor identity in vertebrates., Plouhinec JL., PLoS Biol. October 19, 2017; 15 (10): e2004045.                                              


SHH signaling directed by two oral epithelium-specific enhancers controls tooth and oral development., Sagai T., Sci Rep. October 11, 2017; 7 (1): 13004.          


hmmr mediates anterior neural tube closure and morphogenesis in the frog Xenopus., Prager A., Dev Biol. October 1, 2017; 430 (1): 188-201.                      


Mouth development., Chen J., Wiley Interdiscip Rev Dev Biol. September 1, 2017; 6 (5):               


Folate-dependent methylation of septins governs ciliogenesis during neural tube closure., Toriyama M., FASEB J. August 1, 2017; 31 (8): 3622-3635.                    


Identification of new regulators of embryonic patterning and morphogenesis in Xenopus gastrulae by RNA sequencing., Popov IK., Dev Biol. June 15, 2017; 426 (2): 429-441.                    


High variability of expression profiles of homeologous genes for Wnt, Hh, Notch, and Hippo signaling pathways in Xenopus laevis., Michiue T., Dev Biol. June 15, 2017; 426 (2): 270-290.                  


Coordinating heart morphogenesis: A novel role for hyperpolarization-activated cyclic nucleotide-gated (HCN) channels during cardiogenesis in Xenopus laevis., Pitcairn E., Commun Integr Biol. May 10, 2017; 10 (3): e1309488.                            


A novel role of the organizer gene Goosecoid as an inhibitor of Wnt/PCP-mediated convergent extension in Xenopus and mouse., Ulmer B., Sci Rep. February 21, 2017; 7 43010.                  

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