Papers associated with endoderm (and shh)

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	Xbp1 and Brachyury establish an evolutionarily conserved subcircuit of the notochord gene regulatory network., Wu Y., Elife. January 20, 2022; 11
	Targeted search for scaling genes reveals matrixmetalloproteinase 3 as a scaler of the dorsal-ventral pattern in Xenopus laevis embryos., Orlov EE., Dev Cell. January 10, 2022; 57 (1): 95-111.e12.
	Tbx5 drives Aldh1a2 expression to regulate a RA-Hedgehog-Wnt gene regulatory network coordinating cardiopulmonary development., Rankin SA, Rankin SA., Elife. October 13, 2021; 10
	Rab7 is required for mesoderm patterning and gastrulation in Xenopus., Kreis J., Biol Open. July 15, 2021; 10 (7):
	Protocadherin-1 is expressed in the notochord of mouse embryo but is dispensable for its formation., Fukunaga K., Biochem Biophys Rep. June 15, 2021; 27 101047.
	Evolution of Somite Compartmentalization: A View From Xenopus., Della Gaspera B., Front Cell Dev Biol. January 1, 2021; 9 790847.
	Endosome-Mediated Epithelial Remodeling Downstream of Hedgehog-Gli Is Required for Tracheoesophageal Separation., Nasr T., Dev Cell. December 16, 2019; 51 (6): 665-674.e6.
	A dual function of FGF signaling in Xenopus left-right axis formation., Schneider I., Development. May 10, 2019; 146 (9):
	WDR5 regulates left-right patterning via chromatin-dependent and -independent functions., Kulkarni SS., Development. November 28, 2018; 145 (23):
	Evolutionarily conserved Tbx5-Wnt2/2b pathway orchestrates cardiopulmonary development., Steimle JD., Proc Natl Acad Sci U S A. November 6, 2018; 115 (45): E10615-E10624.
	Divergent axial morphogenesis and early shh expression in vertebrate prospective floor plate., Kremnyov S., Evodevo. January 31, 2018; 9 4.
	Evolutionary Proteomics Uncovers Ancient Associations of Cilia with Signaling Pathways., Sigg MA., Dev Cell. December 18, 2017; 43 (6): 744-762.e11.
	A molecular atlas of the developing ectoderm defines neural, neural crest, placode, and nonneural progenitor identity in vertebrates., Plouhinec JL., PLoS Biol. October 19, 2017; 15 (10): e2004045.
	Mouth development., Chen J., Wiley Interdiscip Rev Dev Biol. September 1, 2017; 6 (5):
	A novel role of the organizer gene Goosecoid as an inhibitor of Wnt/PCP-mediated convergent extension in Xenopus and mouse., Ulmer B., Sci Rep. February 21, 2017; 7 43010.
	A Retinoic Acid-Hedgehog Cascade Coordinates Mesoderm-Inducing Signals and Endoderm Competence during Lung Specification., Rankin SA, Rankin SA., Cell Rep. June 28, 2016; 16 (1): 66-78.
	At new heights - endodermal lineages in development and disease., Ober EA., Development. June 1, 2015; 142 (11): 1912-1917.
	ATP4 and ciliation in the neuroectoderm and endoderm of Xenopus embryos and tadpoles., Walentek P., Data Brief. April 20, 2015; 4 22-31.
	A Molecular atlas of Xenopus respiratory system development., Rankin SA, Rankin SA., Dev Dyn. January 1, 2015; 244 (1): 69-85.
	Hedgehog activity controls opening of the primary mouth., Tabler JM., Dev Biol. December 1, 2014; 396 (1): 1-7.
	Gene regulatory networks governing lung specification., Rankin SA, Rankin SA., J Cell Biochem. August 1, 2014; 115 (8): 1343-50.
	FoxA4 favours notochord formation by inhibiting contiguous mesodermal fates and restricts anterior neural development in Xenopus embryos., Murgan S., PLoS One. January 1, 2014; 9 (10): e110559.
	mRNA fluorescence in situ hybridization to determine overlapping gene expression in whole-mount mouse embryos., Neufeld SJ., Dev Dyn. September 1, 2013; 242 (9): 1094-100.
	The cytoskeletal protein Zyxin inhibits Shh signaling during the CNS patterning in Xenopus laevis through interaction with the transcription factor Gli1., Martynova NY., Dev Biol. August 1, 2013; 380 (1): 37-48.
	Uncoupling VEGFA functions in arteriogenesis and hematopoietic stem cell specification., Leung A., Dev Cell. January 28, 2013; 24 (2): 144-58.
	Current perspectives of the signaling pathways directing neural crest induction., Stuhlmiller TJ., Cell Mol Life Sci. November 1, 2012; 69 (22): 3715-37.
	Suppression of Bmp4 signaling by the zinc-finger repressors Osr1 and Osr2 is required for Wnt/β-catenin-mediated lung specification in Xenopus., Rankin SA, Rankin SA., Development. August 1, 2012; 139 (16): 3010-20.
	fus/TLS orchestrates splicing of developmental regulators during gastrulation., Dichmann DS., Genes Dev. June 15, 2012; 26 (12): 1351-63.
	RFX2 is broadly required for ciliogenesis during vertebrate development., Chung MI., Dev Biol. March 1, 2012; 363 (1): 155-65.
	Ventx factors function as Nanog-like guardians of developmental potential in Xenopus., Scerbo P., PLoS One. January 1, 2012; 7 (5): e36855.
	Shh signalling restricts the expression of Gcm2 and controls the position of the developing parathyroids., Grevellec A., Dev Biol. May 15, 2011; 353 (2): 194-205.
	A revised model of Xenopus dorsal midline development: differential and separable requirements for Notch and Shh signaling., Peyrot SM., Dev Biol. April 15, 2011; 352 (2): 254-66.
	Strange as it may seem: the many links between Wnt signaling, planar cell polarity, and cilia., Wallingford JB., Genes Dev. February 1, 2011; 25 (3): 201-13.
	Retinoic acid is a key regulatory switch determining the difference between lung and thyroid fates in Xenopus laevis., Wang JH., BMC Dev Biol. January 26, 2011; 11 75.
	The role of the visceral mesoderm in the development of the gastrointestinal tract., McLin VA., Gastroenterology. June 1, 2009; 136 (7): 2074-91.
	Complementary expression of HSPG 6-O-endosulfatases and 6-O-sulfotransferase in the hindbrain of Xenopus laevis., Winterbottom EF., Gene Expr Patterns. March 1, 2009; 9 (3): 166-72.
	Cephalic hedgehog expression is regulated directly by Sox17 in endoderm development of Xenopus laevis., Yagi Y., Cytotechnology. June 1, 2008; 57 (2): 151-9.
	TALE-family homeodomain proteins regulate endodermal sonic hedgehog expression and pattern the anterior endoderm., diIorio P., Dev Biol. April 1, 2007; 304 (1): 221-31.
	Cholesterol homeostasis in development: the role of Xenopus 7-dehydrocholesterol reductase (Xdhcr7) in neural development., Tadjuidje E., Dev Dyn. August 1, 2006; 235 (8): 2095-110.
	Negative regulation of Hedgehog signaling by the cholesterogenic enzyme 7-dehydrocholesterol reductase., Koide T., Development. June 1, 2006; 133 (12): 2395-405.
	Cooperative non-cell and cell autonomous regulation of Nodal gene expression and signaling by Lefty/Antivin and Brachyury in Xenopus., Cha YR., Dev Biol. February 15, 2006; 290 (2): 246-64.
	Xenopus nodal related-1 is indispensable only for left-right axis determination., Toyoizumi R., Int J Dev Biol. January 1, 2005; 49 (8): 923-38.
	Retinoic acid signaling is essential for pancreas development and promotes endocrine at the expense of exocrine cell differentiation in Xenopus., Chen Y., Dev Biol. July 1, 2004; 271 (1): 144-60.
	Patterning and tissue movements in a novel explant preparation of the marginal zone of Xenopus laevis., Davidson LA., Gene Expr Patterns. July 1, 2004; 4 (4): 457-66.
	Endogenous Cerberus activity is required for anterior head specification in Xenopus., Silva AC., Development. October 1, 2003; 130 (20): 4943-53.
	The midline (notochord and notoplate) patterns the cell motility underlying convergence and extension of the Xenopus neural plate., Ezin AM., Dev Biol. April 1, 2003; 256 (1): 100-14.
	Lefty-dependent inhibition of Nodal- and Wnt-responsive organizer gene expression is essential for normal gastrulation., Branford WW., Curr Biol. December 23, 2002; 12 (24): 2136-41.
	A direct requirement for Hedgehog signaling for normal specification of all ventral progenitor domains in the presumptive mammalian spinal cord., Wijgerde M., Genes Dev. November 15, 2002; 16 (22): 2849-64.
	A novel Xenopus Smad-interacting forkhead transcription factor (XFast-3) cooperates with XFast-1 in regulating gastrulation movements., Howell M., Development. June 1, 2002; 129 (12): 2823-34.
	Overexpression of the secreted factor Mig30 expressed in the Spemann organizer impairs morphogenetic movements during Xenopus gastrulation., Hayata T., Mech Dev. March 1, 2002; 112 (1-2): 37-51.

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