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Summary Expression Phenotypes Gene Literature (486) GO Terms (0) Nucleotides (2) Proteins (0) Interactants (635) Wiki

Papers associated with trna

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2 paper(s) referencing morpholinos

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A Simplified Protocol to Incorporate the Fluorescent Unnatural Amino Acid ANAP into Xenopus laevis Oocyte-Expressed P2X7 Receptors., Durner A, Nicke A., Methods Mol Biol. January 1, 2022; 2510 193-216.

A novel class III endogenous retrovirus with a class I envelope gene in African frogs with an intact genome and developmentally regulated transcripts in Xenopus tropicalis., Yedavalli VRK, Patil A, Parrish J, Kozak CA., Retrovirology. July 14, 2021; 18 (1): 20.              

A rationally designed orthogonal synthetase for genetically encoded fluorescent amino acids., Steinberg X, Galpin J, Nasir G, Sepúlveda RV, Ladron de Guevara E, Gonzalez-Nilo F, Islas LD, Ahern CA, Brauchi SE., Heliyon. October 1, 2020; 6 (10): e05140.

FOXM1 nuclear transcription factor translocates into mitochondria and inhibits oxidative phosphorylation., Black M, Arumugam P, Shukla S, Pradhan A, Ustiyan V, Milewski D, Kalinichenko VV, Kalin TV., Mol Biol Cell. June 15, 2020; 31 (13): 1411-1424.

Divergent Cl- and H+ pathways underlie transport coupling and gating in CLC exchangers and channels., Leisle L, Xu Y, Fortea E, Lee S, Galpin JD, Vien M, Ahern CA, Accardi A, Bernèche S., Elife. April 28, 2020; 9                               

Direct activation of tRNA methyltransferase-like 1 (Mettl1) gene by thyroid hormone receptor implicates a role in adult intestinal stem cell development and proliferation during Xenopus tropicalis metamorphosis., Na W, Fu L, Luu N, Shi YB., Cell Biosci. March 27, 2020; 10 60.                    

FAM46B is a prokaryotic-like cytoplasmic poly(A) polymerase essential in human embryonic stem cells., Hu JL, Liang H, Zhang H, Yang MZ, Sun W, Zhang P, Luo L, Feng JX, Bai H, Liu F, Zhang T, Yang JY, Gao Q, Long Y, Ma XY, Chen Y, Zhong Q, Yu B, Liao S, Wang Y, Zhao Y, Zeng MS, Cao N, Wang J, Chen W, Yang HT, Gao S., Nucleic Acids Res. March 18, 2020; 48 (5): 2733-2748.                

Co-occurring WARS2 and CHRNA6 mutations in a child with a severe form of infantile parkinsonism., Martinelli S, Cordeddu V, Galosi S, Lanzo A, Palma E, Pannone L, Ciolfi A, Di Nottia M, Rizza T, Bocchinfuso G, Traversa A, Caputo V, Farrotti A, Carducci C, Bernardini L, Cogo S, Paglione M, Venditti M, Bentivoglio A, Ng J, Kurian MA, Civiero L, Greggio E, Stella L, Trettel F, Sciaccaluga M, Roseti C, Carrozzo R, Fucile S, Limatola C, Di Schiavi E, Tartaglia M, Leuzzi V., Parkinsonism Relat Disord. March 1, 2020; 72 75-79.

Skeletal muscle differentiation drives a dramatic downregulation of RNA polymerase III activity and differential expression of Polr3g isoforms., McQueen C, Hughes GL, Pownall ME., Dev Biol. October 1, 2019; 454 (1): 74-84.                        

Pituitary cell translation and secretory capacities are enhanced cell autonomously by the transcription factor Creb3l2., Khetchoumian K, Balsalobre A, Mayran A, Christian H, Chénard V, St-Pierre J, Drouin J., Nat Commun. September 3, 2019; 10 (1): 3960.                                  

Biallelic KARS pathogenic variants cause an early-onset progressive leukodystrophy., Itoh M, Dai H, Horike SI, Gonzalez J, Kitami Y, Meguro-Horike M, Kuki I, Shimakawa S, Yoshinaga H, Ota Y, Okazaki T, Maegaki Y, Nabatame S, Okazaki S, Kawawaki H, Ueno N, Goto YI, Kato Y., Brain. March 1, 2019; 142 (3): 560-573.

Engineered transfer RNAs for suppression of premature termination codons., Lueck JD, Yoon JS, Perales-Puchalt A, Mackey AL, Infield DT, Behlke MA, Pope MR, Weiner DB, Skach WR, McCray PB, Ahern CA., Nat Commun. February 18, 2019; 10 (1): 822.          

Lariat intronic RNAs in the cytoplasm of vertebrate cells., Talhouarne GJS, Gall JG., Proc Natl Acad Sci U S A. August 21, 2018; 115 (34): E7970-E7977.                        

Replacing voltage sensor arginines with citrulline provides mechanistic insight into charge versus shape., Infield DT, Lee EEL, Galpin JD, Galles GD, Bezanilla F, Ahern CA., J Gen Physiol. July 2, 2018; 150 (7): 1017-1024.          

Orthogonality of Pyrrolysine tRNA in the Xenopus oocyte., Infield DT, Lueck JD, Galpin JD, Galles GD, Ahern CA., Sci Rep. March 26, 2018; 8 (1): 5166.              

Site-Directed Unnatural Amino Acid Mutagenesis to Investigate Potassium Channel Pharmacology in Xenopus laevis Oocytes., Kim RY, Kurata HT., Methods Mol Biol. January 1, 2018; 1684 253-263.

Voltage-clamp Fluorometry in Xenopus Oocytes Using Fluorescent Unnatural Amino Acids., Kalstrup T, Blunck R., J Vis Exp. May 27, 2017; (123):

A selectivity filter at the intracellular end of the acid-sensing ion channel pore., Lynagh T, Flood E, Boiteux C, Wulf M, Komnatnyy VV, Colding JM, Allen TW, Pless SA., Elife. May 12, 2017; 6                   

Unique Contributions of an Arginine Side Chain to Ligand Recognition in a Glutamate-gated Chloride Channel., Lynagh T, Komnatnyy VV, Pless SA., J Biol Chem. March 3, 2017; 292 (9): 3940-3946.        

Studying nuclear functions of aminoacyl tRNA synthetases., Shi Y, Wei N, Yang XL., Methods. January 15, 2017; 113 105-110.

Cellular encoding of Cy dyes for single-molecule imaging., Leisle L, Chadda R, Lueck JD, Infield DT, Galpin JD, Krishnamani V, Robertson JL, Ahern CA., Elife. December 12, 2016; 5                     

Atomic mutagenesis in ion channels with engineered stoichiometry., Lueck JD, Mackey AL, Infield DT, Galpin JD, Li J, Roux B, Ahern CA., Elife. October 6, 2016; 5           

Xenopus Mcm10 is a CDK-substrate required for replication fork stability., Chadha GS, Gambus A, Gillespie PJ, Blow JJ., Cell Cycle. August 17, 2016; 15 (16): 2183-2195.            

Possible interaction between the bacterial transcription factor ArtA and the eukaryotic RNA polymerase III promoter., Matsutani S., Genetica. June 1, 2016; 144 (3): 361-74.

Transcription factors Mix1 and VegT, relocalization of vegt mRNA, and conserved endoderm and dorsal specification in frogs., Sudou N, Garcés-Vásconez A, López-Latorre MA, Taira M, Del Pino EM., Proc Natl Acad Sci U S A. May 17, 2016; 113 (20): 5628-33.                      

A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning., Kırlı K, Karaca S, Dehne HJ, Samwer M, Pan KT, Lenz C, Urlaub H, Görlich D., Elife. December 17, 2015; 4                     

Atomic basis for therapeutic activation of neuronal potassium channels., Kim RY, Yau MC, Galpin JD, Seebohm G, Ahern CA, Pless SA, Kurata HT., Nat Commun. September 3, 2015; 6 8116.                

Sulf1 has ligand-dependent effects on canonical and non-canonical Wnt signalling., Fellgett SW, Maguire RJ, Pownall ME., J Cell Sci. April 1, 2015; 128 (7): 1408-21.                        

Exportin-5 mediates nuclear export of SRP RNA in vertebrates., Takeiwa T, Taniguchi I, Ohno M., Genes Cells. April 1, 2015; 20 (4): 281-91.          

tRFdb: a database for transfer RNA fragments., Kumar P, Mudunuri SB, Anaya J, Dutta A., Nucleic Acids Res. January 1, 2015; 43 (Database issue): D141-5.    

Pseudouridine in mRNA: Incorporation, Detection, and Recoding., Wu G, Huang C, Yu YT., Methods Enzymol. January 1, 2015; 560 187-217.

Positive mRNA Translational Control in Germ Cells by Initiation Factor Selectivity., Friday AJ, Keiper BD., Biomed Res Int. January 1, 2015; 2015 327963.    

Incorporation of Non-Canonical Amino Acids., Leisle L, Valiyaveetil F, Mehl RA, Ahern CA., Adv Exp Med Biol. January 1, 2015; 869 119-51.

Protein phosphatase 2A and Cdc7 kinase regulate the DNA unwinding element-binding protein in replication initiation., Gao Y, Yao J, Poudel S, Romer E, Abu-Niaaj L, Leffak M., J Biol Chem. December 26, 2014; 289 (52): 35987-6000.

Small ubiquitin-like modifier (SUMO)-mediated repression of the Xenopus Oocyte 5 S rRNA genes., Malik MQ, Bertke MM, Huber PW., J Biol Chem. December 19, 2014; 289 (51): 35468-81.                

Upregulation of eIF5B controls cell-cycle arrest and specific developmental stages., Lee S, Truesdell SS, Bukhari SI, Lee JH, LeTonqueze O, Vasudevan S., Proc Natl Acad Sci U S A. October 14, 2014; 111 (41): E4315-22.        

In vivo incorporation of non-canonical amino acids by using the chemical aminoacylation strategy: a broadly applicable mechanistic tool., Dougherty DA, Van Arnam EB., Chembiochem. August 18, 2014; 15 (12): 1710-20.

Dynamics of internal pore opening in K(V) channels probed by a fluorescent unnatural amino acid., Kalstrup T, Blunck R., Proc Natl Acad Sci U S A. May 14, 2013; 110 (20): 8272-7.

Expanding the genetic code in Xenopus laevis oocytes., Ye S, Riou M, Carvalho S, Paoletti P., Chembiochem. January 21, 2013; 14 (2): 230-5.

Pearls are novel Cajal body-like structures in the Xenopus germinal vesicle that are dependent on RNA pol III transcription., Nizami ZF, Gall JG., Chromosome Res. December 1, 2012; 20 (8): 953-69.

Next generation sequencing and comparative analyses of Xenopus mitogenomes., Lloyd RE, Foster PG, Guille M, Littlewood DT., BMC Genomics. September 19, 2012; 13 496.            

fus/TLS orchestrates splicing of developmental regulators during gastrulation., Dichmann DS, Harland RM., Genes Dev. June 15, 2012; 26 (12): 1351-63.                        

Routing of Biomolecules and Transgenes' Vectors in Nuclei of Oocytes., Malecki M, Malecki B., J Fertili In Vitro. April 30, 2012; 2012 (2): 108-118.

A large scale screen for neural stem cell markers in Xenopus retina., Parain K, Mazurier N, Bronchain O, Borday C, Cabochette P, Chesneau A, Colozza G, El Yakoubi W, Hamdache J, Locker M, Gilchrist MJ, Pollet N, Perron M., Dev Neurobiol. April 1, 2012; 72 (4): 491-506.                                                    

MicroRNA-mediated mRNA translation activation in quiescent cells and oocytes involves recruitment of a nuclear microRNP., Truesdell SS, Mortensen RD, Seo M, Schroeder JC, Lee JH, LeTonqueze O, Vasudevan S., Sci Rep. January 1, 2012; 2 842.                

Molecular phylogeny of OVOL genes illustrates a conserved C2H2 zinc finger domain coupled by hypervariable unstructured regions., Kumar A, Bhandari A, Sinha R, Sardar P, Sushma M, Goyal P, Goswami C, Grapputo A., PLoS One. January 1, 2012; 7 (6): e39399.                

Inhibition of selenocysteine tRNA[Ser]Sec aminoacylation provides evidence that aminoacylation is required for regulatory methylation of this tRNA., Kim JY, Carlson BA, Xu XM, Zeng Y, Chen S, Gladyshev VN, Lee BJ, Hatfield DL., Biochem Biophys Res Commun. June 17, 2011; 409 (4): 814-9.

Gadd45a is an RNA binding protein and is localized in nuclear speckles., Sytnikova YA, Kubarenko AV, Schäfer A, Weber AN, Niehrs C., PLoS One. January 7, 2011; 6 (1): e14500.            

Preparation of translationally competent tRNA by direct chemical acylation., Duffy NH, Dougherty DA., Org Lett. September 3, 2010; 12 (17): 3776-9.

Cajal body surveillance of U snRNA export complex assembly., Suzuki T, Izumi H, Ohno M., J Cell Biol. August 23, 2010; 190 (4): 603-12.            

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