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Summary Expression Phenotypes Gene Literature (9) GO Terms (45) Nucleotides (188) Proteins (81) Interactants (363) Wiki
XB-GENEPAGE-1008907

Show:     All X. tropicalis X. laevis

Nucleotide sequences for chd3 - All

RefSeq mRNAs(17)
Models - Gene (29)
Models - mRNA (45)
mRNAs (18)
ESTs (62)

RefSeq mRNAs (17)

Accession Version Protein Name Length Protein Species
XM_002940828 XM_002940828.5 chromodomain-helicase-DNA-binding protein 3 isoform X1 7036 bp XP_002940874 X. tropicalis
XM_031899553 XM_031899553.1 XP_031755413.1 chromodomain-helicase-DNA-binding protein 3 isoform X2 7032 bp XP_031755413 X. tropicalis
XM_031899554 XM_031899554.1 XP_031755414.1 chromodomain-helicase-DNA-binding protein 3 isoform X3 7023 bp XP_031755414 X. tropicalis
XM_031899555 XM_031899555.1 XP_031755415.1 chromodomain-helicase-DNA-binding protein 3 isoform X4 7019 bp XP_031755415 X. tropicalis
XM_031899556 XM_031899556.1 XP_031755416.1 chromodomain-helicase-DNA-binding protein 3 isoform X5 6873 bp XP_031755416 X. tropicalis
XM_041588948 XM_041588948.1 XP_041444882.1 chromodomain-helicase-DNA-binding protein 3-like isoform X1 6884 bp XP_041444882 X. laevis.S
XM_041588949 XM_041588949.1 XP_041444883.1 chromodomain-helicase-DNA-binding protein 3-like isoform X2 6818 bp XP_041444883 X. laevis.S
XM_041588950 XM_041588950.1 XP_041444884.1 chromodomain-helicase-DNA-binding protein 3-like isoform X3 6599 bp XP_041444884 X. laevis.S
XM_041588951 XM_041588951.1 XP_041444885.1 chromodomain-helicase-DNA-binding protein 3-like isoform X4 6722 bp XP_041444885 X. laevis.S
XM_041588952 XM_041588952.1 XP_041444886.1 chromodomain-helicase-DNA-binding protein 3-like isoform X5 6452 bp XP_041444886 X. laevis.S
XM_041588953 XM_041588953.1 XP_041444887.1 chromodomain-helicase-DNA-binding protein 3-like isoform X6 6170 bp XP_041444887 X. laevis.S
XM_041588954 XM_041588954.1 XP_041444888.1 chromodomain-helicase-DNA-binding protein 3-like isoform X7 6294 bp XP_041444888 X. laevis.S
XM_041588955 XM_041588955.1 XP_041444889.1 chromodomain-helicase-DNA-binding protein 3-like isoform X8 5808 bp XP_041444889 X. laevis.S
XM_018253801 XM_018253801.2 chromodomain-helicase-DNA-binding protein 3 isoform X1 6843 bp XP_018109290 X. laevis.L
XM_018253802 XM_018253802.2 chromodomain-helicase-DNA-binding protein 3 isoform X2 6840 bp XP_018109291 X. laevis.L
XM_018253803 XM_018253803.2 chromodomain-helicase-DNA-binding protein 3 isoform X3 6842 bp XP_018109292 X. laevis.L
XM_018253804 XM_018253804.2 chromodomain-helicase-DNA-binding protein 3 isoform X4 6684 bp XP_018109293 X. laevis.L

Models - Gene (29)

Source Version Model Species
NCBI 10.1 XBXL10_1g17449 X. laevis.S
NCBI 10.1 XBXL10_1g14636 X. laevis.L
NCBI 10.0 XBXT10g000447 X. tropicalis
ENSEMBL 10.0 ENSXETG00000012991 X. tropicalis
Xenbase 9.2 gene8743 X. laevis.L
JGI 9.1 Xelaev18019318m.g X. laevis.L
JGI 9.1 Xelaev18000914m.g X. laevis.S
Xenbase 9.1 gene1852 X. tropicalis
ENSEMBL 9.1 ENSXETG00000012991 X. tropicalis
JGI 7.1 Xetro.K05622 X. tropicalis
JGI 6.0 XeXenL6RMv10012789m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000012991 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6750073 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6750233 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6750234 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6750024 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_6750005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_675000025 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_675000026 X. tropicalis
JGI 4.1 gw1.675.73.1 X. tropicalis
JGI 4.1 gw1.675.234.1 X. tropicalis
JGI 4.1 gw1.675.233.1 X. tropicalis
JGI 4.1 gw1.675.113.1 X. tropicalis
JGI 4.1 e_gw1.675.73.1 X. tropicalis
JGI 4.1 e_gw1.675.234.1 X. tropicalis
JGI 4.1 e_gw1.675.233.1 X. tropicalis
JGI 4.1 e_gw1.675.113.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6750046 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6750025 X. tropicalis

mRNAs based on gene models(45)

Source Version Model Species
NCBI 10.1 XBmRNA27379 X. laevis.L
NCBI 10.1 XBmRNA32180 X. laevis.S
ENSEMBL 10.0 ENSXETT00000072474 X. tropicalis
NCBI 10.0 mRNA002379 X. tropicalis
ENSEMBL 10.0 ENSXETT00000028484 X. tropicalis
Xenbase 9.2 rna25455 X. laevis.L
ENSEMBL 9.1 ENSXETT00000068498 X. tropicalis
Xenbase 9.1 rna6045 X. tropicalis
JGI 9.1 Xelaev18019318m X. laevis.L
ENSEMBL 9.1 ENSXETT00000075569 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082824 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084325 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090103 X. tropicalis
ENSEMBL 9.1 ENSXETT00000028484 X. tropicalis
JGI 9.1 Xelaev18000914m X. laevis.S
ENSEMBL 9.1 ENSXETT00000072474 X. tropicalis
JGI 7.1 Xetro.K05622.1 X. tropicalis
JGI 7.1 Xetro.K05622.2 X. tropicalis
JGI 7.1 Xetro.K05622.4 X. tropicalis
JGI 7.1 Xetro.K05622.3 X. tropicalis
JGI 6.0 XeXenL6RMv10012789m X. laevis.S
JGI 4.1 gw1.675.233.1 X. tropicalis
JGI 4.1 gw1.675.234.1 X. tropicalis
JGI 4.1 gw1.675.73.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_675000025 X. tropicalis
JGI 4.1 e_gw1.675.233.1 X. tropicalis
JGI 4.1 e_gw1.675.234.1 X. tropicalis
JGI 4.1 e_gw1.675.73.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000006381 X. tropicalis
ENSEMBL 4.1 ENSXETT00000028474 X. tropicalis
ENSEMBL 4.1 ENSXETT00000028475 X. tropicalis
ENSEMBL 4.1 ENSXETT00000028477 X. tropicalis
ENSEMBL 4.1 ENSXETT00000028479 X. tropicalis
ENSEMBL 4.1 ENSXETT00000028481 X. tropicalis
ENSEMBL 4.1 ENSXETT00000028484 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6750024 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6750025 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_6750005 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6750046 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6750073 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6750233 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6750234 X. tropicalis
JGI 4.1 e_gw1.675.113.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_675000026 X. tropicalis
JGI 4.1 gw1.675.113.1 X. tropicalis

mRNAs from cDNA libraries (18)

Clone Accession Species Library Anatomy Stage
IMAGE:8923921 BC169169 X. tropicalis NICHD_XGC_tropThy1 thymus frog
XM_002940828 X. tropicalis
XM_031899553 X. tropicalis
XM_031899554 X. tropicalis
XM_031899555 X. tropicalis
XM_031899556 X. tropicalis
XM_041588948 X. laevis.S
XM_041588949 X. laevis.S
XM_041588950 X. laevis.S
XM_041588951 X. laevis.S
XM_041588952 X. laevis.S
XM_041588953 X. laevis.S
XM_041588954 X. laevis.S
XM_041588955 X. laevis.S
XM_018253801 X. laevis.L
XM_018253802 X. laevis.L
XM_018253803 X. laevis.L
XM_018253804 X. laevis.L

ESTs (62)

Clone Accession 5'/3' Species Library Anatomy Stage
xtbs34M07 CN090876 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7645274 CX802157 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8904173 EL794900 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7672606 CX881889 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7643881 CX799737 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7665049 CX850135 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7645060 CX801986 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8923921 EL669016 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
st35l21 DC173513 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st38l21 DC176369 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st74m21 DC185163 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7661933 CX843581 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7660604 CX841222 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7659254 CX839034 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7657159 CX828499 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653235 CX821429 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:6995593 CF239249 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7649468 CX809450 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649301 CX809296 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8932069 EL667237 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7634424 CX338020 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8952449 EG654564 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:7621907 CX342667 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7646570 CX804873 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7719178 CX982433 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7661933 CX843580 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
rst35l21 DC143273 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7634424 CX338019 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7621907 CX342666 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs34M07 CN090875 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7643881 CX799736 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645060 CX801985 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645274 CX802156 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646570 CX804872 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649468 CX809449 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7653235 CX821428 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7657159 CX828498 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7659254 CX839033 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7660604 CX841221 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7665049 CX850134 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7672606 CX881888 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7719178 CX982432 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:8932069 EL667236 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8923921 EL669015 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:6631701 BU906677 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XL056h22 BJ070412 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL205j18 BJ623686 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:6631116 BU906158 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
BG409706 BG409706 5' X. laevis.S Stage 10+ Gastrula Library whole organism NF stage 10 to NF stage 10.5
XL049e07 BJ039374 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGp998F178578 BX845373 5' X. laevis.S Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
IMAGE:8538037 EB482290 5' X. laevis.S NICHD_XGC_olfb brain unspecified stage
IMAGE:3517456 BG264249 5' X. laevis.S Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
IMAGE:6631564 BU906554 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
za49c11 AW158935 5' X. laevis.S Xenopus EST library brain NF stage 45 to NF stage 66
IMAGE:8526974 EB473523 5' X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:3475747 BG892819 5' X. laevis.S Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3517456 BG413928 3' X. laevis.S Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
IMAGE:3475747 BG885880 3' X. laevis.S Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
XL056h22 BJ087444 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL049e07 BJ054106 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL205j18 BJ640296 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5