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Summary Expression Phenotypes Gene Literature (0) GO Terms (6) Nucleotides (201) Proteins (46) Interactants (20) Wiki
XB-GENEPAGE-489306

Show:     All X. tropicalis X. laevis

Nucleotide sequences for sdf2 - All

RefSeq mRNAs(3)
Models - Gene (32)
Models - mRNA (32)
mRNAs (7)
ESTs (87)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001016483 NM_001016483.2 stromal cell-derived factor 2 precursor 1003 bp NP_001016483 X. tropicalis
NM_001094536 NM_001094536.2 stromal cell derived factor 2 L homeolog precursor 987 bp NP_001088005 X. laevis.L
XM_018248779 XM_018248779.2 stromal cell-derived factor 2 1353 bp XP_018104268 X. laevis.S

Models - Gene (32)

Source Version Model Species
NCBI 10.1 XBXL10_1g6516 X. laevis.L
NCBI 10.1 XBXL10_1g8988 X. laevis.S
NCBI 10.0 XBXT10g017513 X. tropicalis
Xenbase 9.2 gene46697 X. laevis.S
Xenbase 9.2 gene6481 X. laevis.L
JGI 9.1 Xelaev18014150m.g X. laevis.S
JGI 9.1 Xelaev18011705m.g X. laevis.L
Xenbase 9.1 gene5257 X. tropicalis
JGI 8.0 Xetrov14006785m.g X. tropicalis
JGI 7.2 Xelaev16046374m.g X. laevis.L
JGI 7.1 Xetro.B00364 X. tropicalis
JGI 6.0 XeXenL6RMv10029019m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000027007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3050049 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3050014 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_305000013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_305000049 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_305000050 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_305000015 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_305000006 X. tropicalis
JGI 4.1 e_gw1.305.169.1 X. tropicalis
JGI 4.1 e_gw1.305.266.1 X. tropicalis
JGI 4.1 e_gw1.305.71.1 X. tropicalis
JGI 4.1 gw1.305.169.1 X. tropicalis
JGI 4.1 gw1.305.266.1 X. tropicalis
JGI 4.1 gw1.305.71.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3050054 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3050071 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3050169 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3050266 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3050013 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3050048 X. tropicalis

mRNAs based on gene models(32)

Source Version Model Species
NCBI 10.1 XBmRNA12211 X. laevis.L
NCBI 10.1 XBmRNA16722 X. laevis.S
NCBI 10.0 mRNA086498 X. tropicalis
Xenbase 9.2 rna91572 X. laevis.S
Xenbase 9.2 rna18961 X. laevis.L
JGI 9.1 Xelaev18014150m X. laevis.S
Xenbase 9.1 rna17067 X. tropicalis
JGI 9.1 Xelaev18011705m X. laevis.L
JGI 8.0 Xetrov14006785m X. tropicalis
JGI 7.2 Xelaev16046374m X. laevis.L
JGI 7.1 Xetro.B00364.1 X. tropicalis
JGI 6.0 XeXenL6RMv10029019m X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_305000013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_305000049 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_305000050 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_305000015 X. tropicalis
JGI 4.1 e_gw1.305.169.1 X. tropicalis
JGI 4.1 gw1.305.169.1 X. tropicalis
JGI 4.1 gw1.305.266.1 X. tropicalis
JGI 4.1 gw1.305.71.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_305000006 X. tropicalis
JGI 4.1 e_gw1.305.266.1 X. tropicalis
JGI 4.1 e_gw1.305.71.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000041733 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3050013 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3050048 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3050049 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3050014 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3050054 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3050071 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3050169 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3050266 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:9040055 BC170797 X. tropicalis
IMAGE:9040100 BC170842 X. tropicalis
TTpA009i20 CR760879 X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
NM_001016483 X. tropicalis
IMAGE:6934560 BC082685 X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
NM_001094536 X. laevis.L
XM_018248779 X. laevis.S

ESTs (87)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu016g07 AL636139 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8856321 EL819088 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8928477 EL676873 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
TTpA004o13 BX709517 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA009i20 BX706830 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xthr01K17 CN119334 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr43K04 CN115809 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr32L11 CN108816 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr31O15 CN108037 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr25L19 CN104315 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr25G03 CN104005 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr20D08 CN103125 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr18M14 CN100881 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
THdA036n07 CR581084 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA028m20 CR567852 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas035l24 AL654392 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA066d09 CR449084 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:6984109 CF151849 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
TTbA056p24 CR446296 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA044g15 CR427687 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu101k11 AL802838 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu130b10 AL798028 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu078f24 AL779892 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu030j14 AL655598 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu021m02 AL636344 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA056p24 CR446297 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu078f22 BX687856 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu078f24 BX687858 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu101k11 BX690584 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu130b10 BX700430 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA044g15 CR427688 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA028m20 CR567853 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA036n07 CR581085 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr15D02 CN099161 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr18M14 CN100880 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr20D08 CN103124 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr25L19 CN104314 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr31O15 CN108036 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr32L11 CN108815 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA003n04 BX705046 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA009i20 BX706831 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA004o13 BX709518 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA060g01 BX737865 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8928477 EL676872 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
XL454o03ex BP687646 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL456p02ex BP688289 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL142n10 BJ093567 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL085b14 BJ066082 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
PBX0091C11 AW640099 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL097k24 BJ073670 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL172j06 BJ615559 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:6934560 CB942752 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XL171a19 BJ615219 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL168o06 BJ614649 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl239h10 DC105550 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl257f19 DC110965 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl258f19 DC111253 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL004l18 BJ030633 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL048a18 BJ038978 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL034a06 BJ043163 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
xlk79p01ex DC060939 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk3a10ex DC053613 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk51i04ex DC032934 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
PBX0059E08 AW637529 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL143p04 BJ093937 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3548521 BG021496 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGp998E028637 BX852605 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
PBX0025F09 AW634841 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL142n10 BJ097749 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxl257f19 DC076288 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3548521 BF615733 3' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
rxl239h10 DC071271 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk79p01ex DC027456 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk3a10ex DC020246 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL097k24 BJ091618 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxlk51i04ex DC000159 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL004l18 BJ045615 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL143p04 BJ097954 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL176e09 BJ632837 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxl258f19 DC076555 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL172j06 BJ632184 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL048a18 BJ053732 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL001c24 BJ055574 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL034a06 BJ057098 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL171a19 BJ631873 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL085b14 BJ083409 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL168o06 BJ631348 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5