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Summary Expression Phenotypes Gene Literature (4) GO Terms (32) Nucleotides (102) Proteins (65) Interactants (481) Wiki
XB-GENEPAGE-6046042

Show:     All X. tropicalis X. laevis

Nucleotide sequences for setd1a - All

RefSeq mRNAs(17)
Models - Gene (20)
Models - mRNA (27)
mRNAs (17)
ESTs (8)

RefSeq mRNAs (17)

Accession Version Protein Name Length Protein Species
XM_012954313 XM_012954313.2 histone-lysine N-methyltransferase SETD1A isoform X2 7269 bp XP_012809767 X. tropicalis
XM_012954314 XM_012954314.2 histone-lysine N-methyltransferase SETD1A isoform X2 7323 bp XP_012809768 X. tropicalis
XM_012954315 XM_012954315.3 histone-lysine N-methyltransferase SETD1A isoform X2 7447 bp XP_012809769 X. tropicalis
XM_031893758 XM_031893758.1 XP_031749618.1 histone-lysine N-methyltransferase SETD1A isoform X1 7324 bp XP_031749618 X. tropicalis
XM_031893759 XM_031893759.1 XP_031749619.1 histone-lysine N-methyltransferase SETD1A isoform X3 7248 bp XP_031749619 X. tropicalis
XM_018240249 XM_018240249.2 histone-lysine N-methyltransferase SETD1A isoform X4 8102 bp XP_018095738 X. laevis.L
XM_018240252 XM_018240252.2 histone-lysine N-methyltransferase SETD1A isoform X5 7668 bp XP_018095741 X. laevis.L
XM_018240253 XM_018240253.2 histone-lysine N-methyltransferase SETD1A isoform X6 7845 bp XP_018095742 X. laevis.L
XM_018240254 XM_018240254.2 histone-lysine N-methyltransferase SETD1A isoform X7 7765 bp XP_018095743 X. laevis.L
XM_018240255 XM_018240255.2 histone-lysine N-methyltransferase SETD1A isoform X7 7808 bp XP_018095744 X. laevis.L
XM_041577429 XM_041577429.1 XP_041433363.1 histone-lysine N-methyltransferase SETD1A isoform X1 7851 bp XP_041433363 X. laevis.L
XM_041577430 XM_041577430.1 XP_041433364.1 histone-lysine N-methyltransferase SETD1A isoform X2 7777 bp XP_041433364 X. laevis.L
XM_041577431 XM_041577431.1 XP_041433365.1 histone-lysine N-methyltransferase SETD1A isoform X3 7774 bp XP_041433365 X. laevis.L
XM_018242097 XM_018242097.2 histone-lysine N-methyltransferase SETD1A isoform X2 7308 bp XP_018097586 X. laevis.S
XM_018242098 XM_018242098.2 histone-lysine N-methyltransferase SETD1A isoform X2 7154 bp XP_018097587 X. laevis.S
XM_018242099 XM_018242099.2 histone-lysine N-methyltransferase SETD1A isoform X2 7350 bp XP_018097588 X. laevis.S
XM_041579197 XM_041579197.1 XP_041435131.1 histone-lysine N-methyltransferase SETD1A isoform X1 6781 bp XP_041435131 X. laevis.S

Models - Gene (20)

Source Version Model Species
NCBI 10.1 XBXL10_1g41858 X. laevis.L
NCBI 10.1 XBXL10_1g44242 X. laevis.S
NCBI 10.0 XBXT10g017889 X. tropicalis
ENSEMBL 10.0 ENSXETG00000001921 X. tropicalis
Xenbase 9.2 gene45302 X. laevis.S
Xenbase 9.2 gene39555 X. laevis.L
JGI 9.1 Xelaev18004550m.g X. laevis.S
JGI 9.1 Xelaev18001527m.g X. laevis.L
Xenbase 9.1 gene28281 X. tropicalis
ENSEMBL 9.1 ENSXETG00000001921 X. tropicalis
JGI 7.1 Xetro.K02073 X. tropicalis
JGI 6.0 XeXenL6RMv10003184m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000001921 X. tropicalis
JGI 4.1 e_gw1.661.11.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_661000016 X. tropicalis
JGI 4.1 gw1.661.50.1 X. tropicalis
JGI 4.1 e_gw1.661.50.1 X. tropicalis
JGI 4.1 gw1.661.47.1 X. tropicalis
JGI 4.1 gw1.661.11.1 X. tropicalis
JGI 4.1 e_gw1.661.47.1 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.1 XBmRNA78802 X. laevis.L
NCBI 10.1 XBmRNA83161 X. laevis.S
NCBI 10.0 mRNA088257 X. tropicalis
ENSEMBL 10.0 ENSXETT00000004082 X. tropicalis
ENSEMBL 10.0 ENSXETT00000082802 X. tropicalis
Xenbase 9.2 rna89616 X. laevis.S
Xenbase 9.2 rna81177 X. laevis.L
JGI 9.1 Xelaev18004550m X. laevis.S
ENSEMBL 9.1 ENSXETT00000082802 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101061 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077002 X. tropicalis
ENSEMBL 9.1 ENSXETT00000004082 X. tropicalis
JGI 9.1 Xelaev18001527m X. laevis.L
Xenbase 9.1 rna54804 X. tropicalis
JGI 7.1 Xetro.K02073.3 X. tropicalis
JGI 7.1 Xetro.K02073.4 X. tropicalis
JGI 7.1 Xetro.K02073.1 X. tropicalis
JGI 7.1 Xetro.K02073.2 X. tropicalis
JGI 6.0 XeXenL6RMv10003184m X. laevis.L
JGI 4.1 gw1.661.50.1 X. tropicalis
JGI 4.1 e_gw1.661.47.1 X. tropicalis
JGI 4.1 e_gw1.661.50.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000004082 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_661000016 X. tropicalis
JGI 4.1 gw1.661.11.1 X. tropicalis
JGI 4.1 gw1.661.47.1 X. tropicalis
JGI 4.1 e_gw1.661.11.1 X. tropicalis

mRNAs from cDNA libraries (17)

Clone Accession Species Library Anatomy Stage
XM_012954313 X. tropicalis
XM_012954314 X. tropicalis
XM_012954315 X. tropicalis
XM_031893758 X. tropicalis
XM_031893759 X. tropicalis
XM_018240249 X. laevis.L
XM_018240252 X. laevis.L
XM_018240253 X. laevis.L
XM_018240254 X. laevis.L
XM_018240255 X. laevis.L
XM_041577429 X. laevis.L
XM_041577430 X. laevis.L
XM_041577431 X. laevis.L
XM_018242097 X. laevis.S
XM_018242098 X. laevis.S
XM_018242099 X. laevis.S
XM_041579197 X. laevis.S

ESTs (8)

Clone Accession 5'/3' Species Library Anatomy Stage
st18p05 DC168252 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st30d20 DC172034 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st68o15 DC183663 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st102m23 DC191226 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7660516 CX841278 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7645121 CX801749 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645944 CX803505 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7977582 DR717122 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19