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Summary Expression Phenotypes Gene Literature (1) GO Terms (40) Nucleotides (133) Proteins (42) Interactants (23) Wiki
XB-GENEPAGE-1001789

Show:     All X. tropicalis X. laevis

Nucleotide sequences for pdlim4 - All

RefSeq mRNAs(3)
Models - Gene (26)
Models - mRNA (27)
mRNAs (7)
ESTs (55)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_203920 NM_203920.1 PDZ and LIM domain protein 4 2105 bp NP_989251 X. tropicalis
NM_001193409 NM_001193409.1 PDZ and LIM domain 4 L homeolog 2138 bp NP_001180338 X. laevis.L
XM_018256198 XM_018256198.2 PDZ and LIM domain protein 4 1929 bp XP_018111687 X. laevis.S

Models - Gene (26)

Source Version Model Species
NCBI 10.1 XBXL10_1g12245 X. laevis.L
NCBI 10.1 XBXL10_1g16528 X. laevis.S
NCBI 10.0 XBXT10g001239 X. tropicalis
ENSEMBL 10.0 pdlim4 X. tropicalis
Xenbase 9.2 gene48335 X. laevis.S
Xenbase 9.2 gene2208 X. laevis.L
JGI 9.1 Xelaev18021486m.g X. laevis.S
JGI 9.1 Xelaev18017160m.g X. laevis.L
Xenbase 9.1 gene19129 X. tropicalis
ENSEMBL 9.1 pdlim4 X. tropicalis
JGI 8.0 Xetrov14015409m.g X. tropicalis
JGI 7.1 Xetro.C01353 X. tropicalis
JGI 6.0 XeXenL6RMv10001265m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000016579 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_93000046 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_93000005 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_930004 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_930017 X. tropicalis
JGI 4.1 gw1.93.70.1 X. tropicalis
JGI 4.1 gw1.93.68.1 X. tropicalis
JGI 4.1 gw1.93.67.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_930045 X. tropicalis
JGI 4.1 e_gw1.93.68.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_93000047 X. tropicalis
JGI 4.1 e_gw1.93.67.1 X. tropicalis
JGI 4.1 e_gw1.93.70.1 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.1 XBmRNA31038 X. laevis.S
NCBI 10.1 XBmRNA22894 X. laevis.L
ENSEMBL 10.0 ENSXETT00000036149 X. tropicalis
NCBI 10.0 mRNA006269 X. tropicalis
Xenbase 9.2 rna93889 X. laevis.S
Xenbase 9.2 rna6420 X. laevis.L
JGI 9.1 Xelaev18021486m X. laevis.S
Xenbase 9.1 rna40153 X. tropicalis
JGI 9.1 Xelaev18017160m X. laevis.L
ENSEMBL 9.1 ENSXETT00000036149 X. tropicalis
JGI 8.0 Xetrov14015409m X. tropicalis
JGI 7.1 Xetro.C01353.2 X. tropicalis
JGI 7.1 Xetro.C01353.1 X. tropicalis
JGI 6.0 XeXenL6RMv10001265m X. laevis.L
JGI 4.1 gw1.93.68.1 X. tropicalis
JGI 4.1 e_gw1.93.68.1 X. tropicalis
JGI 4.1 e_gw1.93.70.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000036149 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_930004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_930045 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_930017 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_93000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_93000046 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_93000047 X. tropicalis
JGI 4.1 gw1.93.67.1 X. tropicalis
JGI 4.1 e_gw1.93.67.1 X. tropicalis
JGI 4.1 gw1.93.70.1 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:5379217 BC063900 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TNeu009j09 CT025178 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
NM_203920 X. tropicalis
IMAGE:4056464 BC082415 X. laevis.L
IMAGE:4174502 BC100185 X. laevis.L
NM_001193409 X. laevis.L
XM_018256198 X. laevis.S

ESTs (55)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:6984243 CF151819 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7854700 DT396824 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7720309 CX984031 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:8962926 EL658766 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:7708670 CX962283 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7572395 CX435366 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7794798 CX964162 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TNeu009j09 AL634916 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6992733 CF242219 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
xthr17B20 CN100453 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr15M10 CN098945 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:8955857 EL662416 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8947120 EL656667 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:8939689 EL643649 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
xthr03D10 CN113665 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:5336267 BQ521749 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6990376 CF217743 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5379217 BQ523149 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6978918 CF148599 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6977297 CF150066 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6977297 CF223729 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:8963464 EL658462 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
TTbA069n01 CR437205 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA021i19 CR572580 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:6990376 CF217744 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TTbA047b05 CR417326 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7572395 CX435365 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5336267 BQ521748 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5379217 BQ523148 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
THdA021i19 CR572581 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7708670 CX962282 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7794798 CX964161 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7720309 CX984030 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7854700 DT396823 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8939689 EL643648 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
xthr15M10 CN098944 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr03D10 CN113664 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7980707 DR729242 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7981258 DR725498 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL103d23 BJ057810 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL063e11 BJ059641 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL075n03 BJ062378 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL082e10 BJ065203 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL082m18 BJ065384 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL054k18 BJ069815 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:8541417 EB472365 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
XL016l03 BJ032444 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3744982 BF426852 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:7981258 DR725463 3' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL082e10 BJ087679 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL016l03 BJ047473 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL103d23 BJ075657 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL082m18 BJ087808 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL063e11 BJ078161 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:8541417 EC276917 3' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62