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XB-GENEPAGE-1004690
Nucleotide sequences for pdlim1 - All
RefSeq mRNAs(16) |
Models - Gene (34) |
Models - mRNA (40) |
mRNAs (21) |
ESTs (81) |
RefSeq mRNAs (16)
Accession | Version | Protein Name | Length | Protein | Species |
NM_203599
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NM_203599.1 | PDZ and LIM domain protein 1 | 1354 bp | NP_988930 | X. tropicalis |
XM_012966268
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XM_012966268.3 | PDZ and LIM domain protein 1 isoform X2 | 1510 bp | XP_012821722 | X. tropicalis |
XM_018095313
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XM_018095313.2 | PDZ and LIM domain protein 1 isoform X1 | 1571 bp | XP_017950802 | X. tropicalis |
XM_018095314
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XM_018095314.2 | PDZ and LIM domain protein 1 isoform X3 | 1850 bp | XP_017950803 | X. tropicalis |
XM_031904919
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XM_031904919.1 | XP_031760779.1 PDZ and LIM domain protein 1 isoform X4 | 1657 bp | XP_031760779 | X. tropicalis |
NM_001089208
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NM_001089208.2 | PDZ and LIM domain 1 L homeolog | 1288 bp | NP_001082677 | X. laevis.L |
XM_041568428
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XM_041568428.1 | XP_041424362.1 PDZ and LIM domain 1 L homeolog isoform X1 | 1637 bp | XP_041424362 | X. laevis.L |
XM_041568429
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XM_041568429.1 | XP_041424363.1 PDZ and LIM domain 1 L homeolog isoform X2 | 1556 bp | XP_041424363 | X. laevis.L |
XM_041568430
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XM_041568430.1 | XP_041424364.1 PDZ and LIM domain 1 L homeolog isoform X3 | 1394 bp | XP_041424364 | X. laevis.L |
XM_041568431
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XM_041568431.1 | XP_041424365.1 PDZ and LIM domain 1 L homeolog isoform X4 | 1260 bp | XP_041424365 | X. laevis.L |
NM_001088957
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NM_001088957.1 | PDZ and LIM domain 1 S homeolog | 1262 bp | NP_001082426 | X. laevis.S |
XM_041570431
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XM_041570431.1 | XP_041426365.1 PDZ and LIM domain 1 S homeolog isoform X1 | 1655 bp | XP_041426365 | X. laevis.S |
XM_041570432
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XM_041570432.1 | XP_041426366.1 PDZ and LIM domain 1 S homeolog isoform X2 | 1585 bp | XP_041426366 | X. laevis.S |
XM_041570433
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XM_041570433.1 | XP_041426367.1 PDZ and LIM domain 1 S homeolog isoform X3 | 1435 bp | XP_041426367 | X. laevis.S |
XM_041570434
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XM_041570434.1 | XP_041426368.1 PDZ and LIM domain 1 S homeolog isoform X4 | 1319 bp | XP_041426368 | X. laevis.S |
XM_041570435
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XM_041570435.1 | XP_041426369.1 PDZ and LIM domain 1 S homeolog isoform X5 | 1214 bp | XP_041426369 | X. laevis.S |
Models - Gene (34)
Source | Version | Model | Species |
NCBI | 10.1 |
XBXL10_1g32816
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X. laevis.S |
NCBI | 10.1 |
XBXL10_1g30572
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X. laevis.L |
NCBI | 10.0 |
XBXT10g019835
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X. tropicalis |
ENSEMBL | 10.0 |
pdlim1
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X. tropicalis |
Xenbase | 9.2 |
gene2460
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X. laevis.S |
Xenbase | 9.2 |
gene15055
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X. laevis.L |
JGI | 9.1 |
Xelaev18034803m.g
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X. laevis.L |
JGI | 9.1 |
Xelaev18004505m.g
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X. laevis.S |
Xenbase | 9.1 |
gene4576
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X. tropicalis |
ENSEMBL | 9.1 |
pdlim1
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X. tropicalis |
JGI | 8.0 |
Xetrov14029324m.g
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X. tropicalis |
JGI | 7.2 |
Xelaev16027227m.g
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X. laevis.L |
JGI | 7.1 |
Xetro.G00701
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X. tropicalis |
JGI | 6.0 |
XeXenL6RMv10027280m.g
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X. laevis.L |
JGI | 6.0 |
XeXenL6RMv10013548m.g
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X. laevis.L |
ENSEMBL | 4.1 |
ENSXETG00000008826
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X. tropicalis |
JGI | 4.1 |
fgenesh1_kg.C_scaffold_244000013
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X. tropicalis |
JGI | 4.1 |
fgenesh1_pg.C_scaffold_244000046
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X. tropicalis |
JGI | 4.1 |
fgenesh1_pg.C_scaffold_244000047
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X. tropicalis |
JGI | 4.1 |
fgenesh1_pm.C_scaffold_244000017
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X. tropicalis |
JGI | 4.1 |
estExt_fgenesh1_pm.C_2440017
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X. tropicalis |
JGI | 4.1 |
estExt_fgenesh1_pg.C_2440047
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X. tropicalis |
JGI | 4.1 |
estExt_fgenesh1_kg.C_2440013
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X. tropicalis |
JGI | 4.1 |
estExt_Genewise1.C_2440098
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X. tropicalis |
JGI | 4.1 |
estExt_Genewise1.C_2440097
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X. tropicalis |
JGI | 4.1 |
estExt_Genewise1.C_2440095
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X. tropicalis |
JGI | 4.1 |
estExt_FilteredModels1.C_2440032
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X. tropicalis |
JGI | 4.1 |
gw1.244.98.1
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X. tropicalis |
JGI | 4.1 |
gw1.244.97.1
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X. tropicalis |
JGI | 4.1 |
gw1.244.95.1
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X. tropicalis |
JGI | 4.1 |
e_gw1.244.98.1
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X. tropicalis |
JGI | 4.1 |
e_gw1.244.97.1
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X. tropicalis |
JGI | 4.1 |
e_gw1.244.95.1
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X. tropicalis |
JGI | 4.1 |
estExt_fgenesh1_pg.C_2440046
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X. tropicalis |
mRNAs based on gene models(40)
Source | Version | Model | Species |
NCBI | 10.1 |
XBmRNA57565
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X. laevis.L |
NCBI | 10.1 |
XBmRNA61962
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X. laevis.S |
ENSEMBL | 10.0 |
ENSXETT00000110561
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X. tropicalis |
NCBI | 10.0 |
mRNA097882
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X. tropicalis |
ENSEMBL | 10.0 |
ENSXETT00000019398
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X. tropicalis |
ENSEMBL | 10.0 |
ENSXETT00000110656
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X. tropicalis |
Xenbase | 9.2 |
rna43927
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X. laevis.L |
Xenbase | 9.2 |
rna7159
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X. laevis.S |
JGI | 9.1 |
Xelaev18004505m
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X. laevis.S |
Xenbase | 9.1 |
rna14889
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X. tropicalis |
ENSEMBL | 9.1 |
ENSXETT00000019398
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X. tropicalis |
JGI | 9.1 |
Xelaev18034803m
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X. laevis.L |
JGI | 8.0 |
Xetrov14029324m
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X. tropicalis |
JGI | 7.2 |
Xelaev16027227m
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X. laevis.L |
JGI | 7.1 |
Xetro.G00701.5
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X. tropicalis |
JGI | 7.1 |
Xetro.G00701.3
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X. tropicalis |
JGI | 7.1 |
Xetro.G00701.1
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X. tropicalis |
JGI | 7.1 |
Xetro.G00701.4
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X. tropicalis |
JGI | 7.1 |
Xetro.G00701.2
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X. tropicalis |
JGI | 6.0 |
XeXenL6RMv10027280m
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X. laevis.L |
JGI | 6.0 |
XeXenL6RMv10013548m
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X. laevis.L |
JGI | 4.1 |
gw1.244.95.1
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X. tropicalis |
JGI | 4.1 |
e_gw1.244.97.1
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X. tropicalis |
JGI | 4.1 |
e_gw1.244.98.1
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X. tropicalis |
ENSEMBL | 4.1 |
ENSXETT00000019398
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X. tropicalis |
JGI | 4.1 |
estExt_fgenesh1_kg.C_2440013
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X. tropicalis |
JGI | 4.1 |
estExt_fgenesh1_pg.C_2440046
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X. tropicalis |
JGI | 4.1 |
estExt_fgenesh1_pg.C_2440047
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X. tropicalis |
JGI | 4.1 |
estExt_fgenesh1_pm.C_2440017
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X. tropicalis |
JGI | 4.1 |
estExt_FilteredModels1.C_2440032
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X. tropicalis |
JGI | 4.1 |
estExt_Genewise1.C_2440095
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X. tropicalis |
JGI | 4.1 |
estExt_Genewise1.C_2440097
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X. tropicalis |
JGI | 4.1 |
estExt_Genewise1.C_2440098
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X. tropicalis |
JGI | 4.1 |
fgenesh1_kg.C_scaffold_244000013
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X. tropicalis |
JGI | 4.1 |
fgenesh1_pg.C_scaffold_244000046
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X. tropicalis |
JGI | 4.1 |
fgenesh1_pg.C_scaffold_244000047
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X. tropicalis |
JGI | 4.1 |
fgenesh1_pm.C_scaffold_244000017
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X. tropicalis |
JGI | 4.1 |
e_gw1.244.95.1
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X. tropicalis |
JGI | 4.1 |
gw1.244.97.1
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X. tropicalis |
JGI | 4.1 |
gw1.244.98.1
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X. tropicalis |
mRNAs from cDNA libraries (21)
Clone | Accession | Species | Library | Anatomy | Stage |
IMAGE:5385031 |
BC061431
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X. tropicalis | NICHD_XGC_Emb5 | whole organism | NF stage 10 to NF stage 13 |
TGas002g22 |
CT025432
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X. tropicalis | XGC-gastrula | whole organism | NF stage 10.5 to NF stage 12 |
NM_203599
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X. tropicalis | ||||
XM_012966268
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X. tropicalis | ||||
XM_018095313
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X. tropicalis | ||||
XM_018095314
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X. tropicalis | ||||
XM_031904919
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X. tropicalis | ||||
IMAGE:6881050 |
BC054254
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X. laevis.L | NICHD_XGC_Tad1 | whole organism | NF stage 54 to prometamorphosis stage |
NM_001089208
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X. laevis.L | ||||
XM_041568428
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X. laevis.L | ||||
XM_041568429
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X. laevis.L | ||||
XM_041568430
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X. laevis.L | ||||
XM_041568431
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X. laevis.L | ||||
IMAGE:4888880 |
BC041514
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X. laevis.S | NICHD_XGC_Emb2 | whole organism | NF stage 17 to NF stage 19 |
IMAGE:6948689 |
BC110941
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X. laevis.S | |||
NM_001088957
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X. laevis.S | ||||
XM_041570431
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X. laevis.S | ||||
XM_041570432
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X. laevis.S | ||||
XM_041570433
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X. laevis.S | ||||
XM_041570434
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X. laevis.S | ||||
XM_041570435
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X. laevis.S |