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Summary Expression Phenotypes Gene Literature (2) GO Terms (27) Nucleotides (251) Proteins (72) Interactants (89) Wiki
XB-GENEPAGE-1004690

Show:     All X. tropicalis X. laevis

Nucleotide sequences for pdlim1 - Xenopus laevis

RefSeq mRNAs(11)
Models - Gene (9)
Models - mRNA (9)
mRNAs (14)
ESTs (19)

RefSeq mRNAs (11)

Accession Version Protein Name Length Protein Species
NM_001089208 NM_001089208.2 PDZ and LIM domain 1 L homeolog 1288 bp NP_001082677 X. laevis.L
XM_041568428 XM_041568428.1 XP_041424362.1 PDZ and LIM domain 1 L homeolog isoform X1 1637 bp XP_041424362 X. laevis.L
XM_041568429 XM_041568429.1 XP_041424363.1 PDZ and LIM domain 1 L homeolog isoform X2 1556 bp XP_041424363 X. laevis.L
XM_041568430 XM_041568430.1 XP_041424364.1 PDZ and LIM domain 1 L homeolog isoform X3 1394 bp XP_041424364 X. laevis.L
XM_041568431 XM_041568431.1 XP_041424365.1 PDZ and LIM domain 1 L homeolog isoform X4 1260 bp XP_041424365 X. laevis.L
NM_001088957 NM_001088957.1 PDZ and LIM domain 1 S homeolog 1262 bp NP_001082426 X. laevis.S
XM_041570431 XM_041570431.1 XP_041426365.1 PDZ and LIM domain 1 S homeolog isoform X1 1655 bp XP_041426365 X. laevis.S
XM_041570432 XM_041570432.1 XP_041426366.1 PDZ and LIM domain 1 S homeolog isoform X2 1585 bp XP_041426366 X. laevis.S
XM_041570433 XM_041570433.1 XP_041426367.1 PDZ and LIM domain 1 S homeolog isoform X3 1435 bp XP_041426367 X. laevis.S
XM_041570434 XM_041570434.1 XP_041426368.1 PDZ and LIM domain 1 S homeolog isoform X4 1319 bp XP_041426368 X. laevis.S
XM_041570435 XM_041570435.1 XP_041426369.1 PDZ and LIM domain 1 S homeolog isoform X5 1214 bp XP_041426369 X. laevis.S

Models - Gene (9)

Source Version Model Species
NCBI 10.1 XBXL10_1g30572 X. laevis.L
NCBI 10.1 XBXL10_1g32816 X. laevis.S
Xenbase 9.2 gene15055 X. laevis.L
Xenbase 9.2 gene2460 X. laevis.S
JGI 9.1 Xelaev18004505m.g X. laevis.S
JGI 9.1 Xelaev18034803m.g X. laevis.L
JGI 7.2 Xelaev16027227m.g X. laevis.L
JGI 6.0 XeXenL6RMv10013548m.g X. laevis.L
JGI 6.0 XeXenL6RMv10027280m.g X. laevis.L

mRNAs based on gene models(9)

Source Version Model Species
NCBI 10.1 XBmRNA61962 X. laevis.S
NCBI 10.1 XBmRNA57565 X. laevis.L
Xenbase 9.2 rna7159 X. laevis.S
Xenbase 9.2 rna43927 X. laevis.L
JGI 9.1 Xelaev18004505m X. laevis.S
JGI 9.1 Xelaev18034803m X. laevis.L
JGI 7.2 Xelaev16027227m X. laevis.L
JGI 6.0 XeXenL6RMv10027280m X. laevis.L
JGI 6.0 XeXenL6RMv10013548m X. laevis.L

mRNAs from cDNA libraries (14)

Clone Accession Species Library Anatomy Stage
IMAGE:6881050 BC054254 X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
NM_001089208 X. laevis.L
XM_041568428 X. laevis.L
XM_041568429 X. laevis.L
XM_041568430 X. laevis.L
XM_041568431 X. laevis.L
IMAGE:4888880 BC041514 X. laevis.S NICHD_XGC_Emb2 whole organism NF stage 17 to NF stage 19
IMAGE:6948689 BC110941 X. laevis.S
NM_001088957 X. laevis.S
XM_041570431 X. laevis.S
XM_041570432 X. laevis.S
XM_041570433 X. laevis.S
XM_041570434 X. laevis.S
XM_041570435 X. laevis.S

ESTs (19)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:6932498 CB945233 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XL006f06 BJ031174 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:8543992 EB474164 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
xlk148n04ex DC051361 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk137i20ex DC047688 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk107k24ex DC038093 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:6875706 CB200591 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XL410f01ex BP672337 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:8644729 EB738238 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
IMAGE:6881050 CB208257 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6877512 CB206338 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6877281 CB206104 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:8823500 EG575998 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8530411 EB476767 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:6875706 CB564776 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
rxlk107k24ex DC005165 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk137i20ex DC014457 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL006f06 BJ046116 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6878720 CB560207 3' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage