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Summary Expression Phenotypes Gene Literature (12) GO Terms (11) Nucleotides (137) Proteins (61) Interactants (153) Wiki
XB-GENEPAGE-1007356

Show:     All X. tropicalis X. laevis

Nucleotide sequences for pcdh7 - Xenopus tropicalis

RefSeq mRNAs(4)
Models - Gene (21)
Models - mRNA (27)
mRNAs (6)
ESTs (20)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001134820 NM_001134820.4 protocadherin-7 precursor 7922 bp NP_001128292 X. tropicalis
XM_012965366 XM_012965366.3 protocadherin-7 isoform X3 5142 bp XP_012820820 X. tropicalis
XM_018093920 XM_018093920.2 protocadherin-7 isoform X1 7719 bp XP_017949409 X. tropicalis
XM_031901728 XM_031901728.1 XP_031757588.1 protocadherin-7 isoform X2 7695 bp XP_031757588 X. tropicalis

Models - Gene (21)

Source Version Model Species
NCBI 10.0 XBXT10g016025 X. tropicalis
ENSEMBL 10.0 pcdh7 X. tropicalis
Xenbase 9.1 gene7228 X. tropicalis
ENSEMBL 9.1 pcdh7 X. tropicalis
JGI 8.0 Xetrov14005259m.g X. tropicalis
JGI 7.1 Xetro.A03124 X. tropicalis
ENSEMBL 4.1 ENSXETG00000022281 X. tropicalis
JGI 4.1 gw1.472.22.1 X. tropicalis
JGI 4.1 gw1.472.23.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4720001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4720021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4720022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4720023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4720001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_472000006 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_472000001 X. tropicalis
JGI 4.1 gw1.472.21.1 X. tropicalis
JGI 4.1 e_gw1.472.23.1 X. tropicalis
JGI 4.1 e_gw1.472.22.1 X. tropicalis
JGI 4.1 e_gw1.472.21.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4720006 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
ENSEMBL 10.0 ENSXETT00000048276 X. tropicalis
ENSEMBL 10.0 ENSXETT00000081203 X. tropicalis
NCBI 10.0 mRNA079278 X. tropicalis
ENSEMBL 10.0 ENSXETT00000082239 X. tropicalis
Xenbase 9.1 rna23357 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081203 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082239 X. tropicalis
ENSEMBL 9.1 ENSXETT00000048276 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071851 X. tropicalis
JGI 8.0 Xetrov14005259m X. tropicalis
JGI 7.1 Xetro.A03124.1 X. tropicalis
JGI 7.1 Xetro.A03124.2 X. tropicalis
JGI 4.1 gw1.472.21.1 X. tropicalis
JGI 4.1 gw1.472.22.1 X. tropicalis
JGI 4.1 gw1.472.23.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4720001 X. tropicalis
JGI 4.1 e_gw1.472.22.1 X. tropicalis
JGI 4.1 e_gw1.472.23.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000048276 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4720006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4720001 X. tropicalis
JGI 4.1 e_gw1.472.21.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4720021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4720022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4720023 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_472000006 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_472000001 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:7652856 BC135972 X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8920652 BC168528 X. tropicalis NICHD_XGC_tropTe1 testis frog
NM_001134820 X. tropicalis
XM_012965366 X. tropicalis
XM_018093920 X. tropicalis
XM_031901728 X. tropicalis

ESTs (20)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7673522 CX883261 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:5309253 BQ392433 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
st97b22 DC192016 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st4e22 DC174227 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TGas103n04 AL961063 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8920652 EL834841 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:9015355 EL861942 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7553732 CX492395 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas039n22 AL651320 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7650778 CX812225 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
TNeu135n06 AL798963 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7652856 CX821097 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
TNeu075o14 AL781595 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7650778 CX812224 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:5309253 BQ392432 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7553732 CX492394 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas103n04 BX754570 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7652856 CX821096 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7673522 CX883260 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8920652 EL834842 3' X. tropicalis NICHD_XGC_tropTe1 testis frog