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Summary Expression Phenotypes Gene Literature (3) GO Terms (13) Nucleotides (159) Proteins (64) Interactants (129) Wiki
XB-GENEPAGE-1008446

Show:     All X. tropicalis X. laevis

Nucleotide sequences for rfx7 - All

RefSeq mRNAs(7)
Models - Gene (38)
Models - mRNA (42)
mRNAs (10)
ESTs (44)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
NM_001097380 NM_001097380.1 DNA-binding protein RFX7 6349 bp NP_001090849 X. tropicalis
XM_012958367 XM_012958367.3 DNA-binding protein RFX7 isoform X1 6815 bp XP_012813821 X. tropicalis
XM_012958368 XM_012958368.3 DNA-binding protein RFX7 isoform X2 6178 bp XP_012813822 X. tropicalis
XM_018253046 XM_018253046.2 DNA-binding protein RFX7 isoform X1 7880 bp XP_018108535 X. laevis.L
XM_018253048 XM_018253048.2 DNA-binding protein RFX7 isoform X2 7248 bp XP_018108537 X. laevis.L
XM_018253049 XM_018253049.1 DNA-binding protein RFX7 isoform X3 6542 bp XP_018108538 X. laevis.L
XM_018255462 XM_018255462.2 DNA-binding protein RFX7 7802 bp XP_018110951 X. laevis.S

Models - Gene (38)

Source Version Model Species
NCBI 10.1 XBXL10_1g15751 X. laevis.S
NCBI 10.1 XBXL10_1g13175 X. laevis.L
NCBI 10.0 XBXT10g018888 X. tropicalis
ENSEMBL 10.0 rfx7 X. tropicalis
Xenbase 9.2 gene5389 X. laevis.L
JGI 9.1 Xelaev18018178m.g X. laevis.L
JGI 9.1 Xelaev18020661m.g X. laevis.S
Xenbase 9.1 gene16389 X. tropicalis
ENSEMBL 9.1 rfx7 X. tropicalis
JGI 7.1 Xetro.C00838 X. tropicalis
JGI 6.0 XeXenL6RMv10046058m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000024544 X. tropicalis
JGI 4.1 gw1.589.13.1 X. tropicalis
JGI 4.1 gw1.589.21.1 X. tropicalis
JGI 4.1 gw1.589.25.1 X. tropicalis
JGI 4.1 gw1.589.3.1 X. tropicalis
JGI 4.1 gw1.589.34.1 X. tropicalis
JGI 4.1 gw1.589.9.1 X. tropicalis
JGI 4.1 gw1.589.18.1 X. tropicalis
JGI 4.1 gw1.589.22.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5890003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5890009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5890021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5890025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5890034 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5890002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_589000005 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_589000002 X. tropicalis
JGI 4.1 e_gw1.589.9.1 X. tropicalis
JGI 4.1 e_gw1.589.34.1 X. tropicalis
JGI 4.1 e_gw1.589.3.1 X. tropicalis
JGI 4.1 e_gw1.589.25.1 X. tropicalis
JGI 4.1 e_gw1.589.22.1 X. tropicalis
JGI 4.1 e_gw1.589.21.1 X. tropicalis
JGI 4.1 e_gw1.589.18.1 X. tropicalis
JGI 4.1 e_gw1.589.13.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5890003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5890005 X. tropicalis

mRNAs based on gene models(42)

Source Version Model Species
NCBI 10.1 XBmRNA24965 X. laevis.L
NCBI 10.1 XBmRNA29424 X. laevis.S
ENSEMBL 10.0 ENSXETT00000036081 X. tropicalis
ENSEMBL 10.0 ENSXETT00000120515 X. tropicalis
ENSEMBL 10.0 ENSXETT00000095454 X. tropicalis
NCBI 10.0 mRNA093333 X. tropicalis
Xenbase 9.2 rna15794 X. laevis.L
ENSEMBL 9.1 ENSXETT00000095454 X. tropicalis
ENSEMBL 9.1 ENSXETT00000036081 X. tropicalis
Xenbase 9.1 rna35988 X. tropicalis
JGI 9.1 Xelaev18018178m X. laevis.L
JGI 9.1 Xelaev18020661m X. laevis.S
JGI 7.1 Xetro.C00838.1 X. tropicalis
JGI 6.0 XeXenL6RMv10046058m X. laevis.L
JGI 4.1 estExt_Genewise1.C_5890009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5890021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5890025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5890034 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_589000005 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_589000002 X. tropicalis
JGI 4.1 gw1.589.13.1 X. tropicalis
JGI 4.1 e_gw1.589.13.1 X. tropicalis
JGI 4.1 gw1.589.21.1 X. tropicalis
JGI 4.1 gw1.589.22.1 X. tropicalis
JGI 4.1 gw1.589.25.1 X. tropicalis
JGI 4.1 gw1.589.3.1 X. tropicalis
JGI 4.1 gw1.589.34.1 X. tropicalis
JGI 4.1 gw1.589.9.1 X. tropicalis
JGI 4.1 gw1.589.18.1 X. tropicalis
JGI 4.1 e_gw1.589.18.1 X. tropicalis
JGI 4.1 e_gw1.589.21.1 X. tropicalis
JGI 4.1 e_gw1.589.22.1 X. tropicalis
JGI 4.1 e_gw1.589.25.1 X. tropicalis
JGI 4.1 e_gw1.589.3.1 X. tropicalis
JGI 4.1 e_gw1.589.34.1 X. tropicalis
JGI 4.1 e_gw1.589.9.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000036081 X. tropicalis
ENSEMBL 4.1 ENSXETT00000052974 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5890005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5890002 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5890003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5890003 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
IMAGE:7643605 BC133720 X. tropicalis NIH_XGC_tropBrn2 brain frog
TEgg048p03 CR761154 X. tropicalis
NM_001097380 X. tropicalis
XM_012958367 X. tropicalis
XM_012958368 X. tropicalis
KF543241 X. laevis.L
XM_018253046 X. laevis.L
XM_018253048 X. laevis.L
XM_018253049 X. laevis.L
XM_018255462 X. laevis.S

ESTs (44)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:6987871 CF220793 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TNeu033i13 AL655860 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7624259 CX401400 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA024d11 CR415891 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas053j24 AL678291 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XZT1112 CX360122 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7786696 CX328838 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas108i19 AL962660 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas141l03 AL966419 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7799538 DN061082 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7745005 DN038886 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:6977023 CF224100 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:7733440 DN017798 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7547552 CX489069 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7793233 CX846585 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7566574 CX506558 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7647539 CX805647 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7643605 CX798801 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
XZT1112 CX360121 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas053j24 BX748048 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas108i19 BX753973 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas141l03 BX765047 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7547552 CX489068 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7566574 CX506557 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA024d11 CR415892 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7624259 CX401399 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7786696 DR904523 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7643605 CX798800 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7647539 CX805646 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7793233 CX846584 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7733440 DN017797 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7745005 DN038885 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7799538 DN061081 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGp998D117825 BX842866 5' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
XL149a16 BJ095218 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL439p23ex BP682198 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998F048731 BX849736 5' X. laevis.L Wellcome CRC pRN3 head head NF stage 29 and 30
IMAGE:3200986 AW765827 5' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
IMAGE:3580035 BG160390 5' X. laevis.L Wellcome CRC pRN3 head head NF stage 29 and 30
IMAGp998O0210199 BX852960 5' X. laevis.L Wellcome CRC pcDNAI St24-26 whole organism NF stage 24 to NF stage 26
IMAGE:3200986 AW767701 3' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
IMAGE:3580035 BG162523 3' X. laevis.L Wellcome CRC pRN3 head head NF stage 29 and 30
XL439p23ex BP718549 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL149a16 BJ099074 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5