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Summary Expression Phenotypes Gene Literature (4) GO Terms (5) Nucleotides (205) Proteins (50) Interactants (83) Wiki
XB-GENEPAGE-1012712

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for xrn1 - All

Models - Gene (23)
Models - mRNA (28)
mRNAs (12)
ESTs (87)

Models - Gene (23)

Source Version Model Species
NCBI 10.0 XBXT10g004337 X. tropicalis
NCBI 10.1 XBXL10_1g24104 X. laevis.L
NCBI 10.1 XBXL10_1g25952 X. laevis.S
ENSEMBL 10.0 xrn1 X. tropicalis
JGI 9.1 Xelaev18027724m.g X. laevis.L
JGI 9.1 Xelaev18029813m.g X. laevis.S
Xenbase 9.1 gene5173 X. tropicalis
Xenbase 9.2 gene49601 X. laevis.L
Xenbase 9.2 gene43760 X. laevis.S
JGI 7.1 Xetro.E00004 X. tropicalis
JGI 6.0 XeXenL6RMv10006904m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000000619 X. tropicalis
JGI 4.1 C_scaffold_262000012 X. tropicalis
JGI 4.1 e_gw1.262.15.1 X. tropicalis
JGI 4.1 e_gw1.262.16.1 X. tropicalis
JGI 4.1 e_gw1.262.17.1 X. tropicalis
JGI 4.1 gw1.262.15.1 X. tropicalis
JGI 4.1 gw1.262.16.1 X. tropicalis
JGI 4.1 gw1.262.17.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_262000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_262000036 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_262000037 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_262000012 X. tropicalis

Models - mRNA (28)

Source Version Model Species
NCBI 10.0 mRNA021634 X. tropicalis
NCBI 10.1 XBmRNA45093 X. laevis.L
NCBI 10.1 XBmRNA48552 X. laevis.S
ENSEMBL 10.0 ENSXETT00000090517 X. tropicalis
ENSEMBL 10.0 ENSXETT00000104977 X. tropicalis
ENSEMBL 10.0 ENSXETT00000065888 X. tropicalis
ENSEMBL 10.0 ENSXETT00000001341 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089769 X. tropicalis
JGI 9.1 Xelaev18027724m X. laevis.L
JGI 9.1 Xelaev18029813m X. laevis.S
Xenbase 9.1 rna16828 X. tropicalis
Xenbase 9.2 rna95654 X. laevis.L
Xenbase 9.2 rna87304 X. laevis.S
JGI 7.1 Xetro.E00004.2 X. tropicalis
JGI 7.1 Xetro.E00004.1 X. tropicalis
JGI 6.0 XeXenL6RMv10006904m X. laevis.L
JGI 4.1 C_scaffold_262000012 X. tropicalis
ENSEMBL 4.1 ENSXETT00000001359 X. tropicalis
JGI 4.1 e_gw1.262.15.1 X. tropicalis
JGI 4.1 e_gw1.262.16.1 X. tropicalis
JGI 4.1 e_gw1.262.17.1 X. tropicalis
JGI 4.1 gw1.262.15.1 X. tropicalis
JGI 4.1 gw1.262.16.1 X. tropicalis
JGI 4.1 gw1.262.17.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_262000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_262000036 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_262000037 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_262000012 X. tropicalis

mRNAs (12)

Clone Accession Species Library Anatomy Stage
TGas119o04 CR762347 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TEgg143o21 CT485707 X. tropicalis
XM_002937098 X. tropicalis
XM_018265779 X. laevis.S
XM_018265778 X. laevis.S
XM_018265776 X. laevis.S
XM_018263815 X. laevis.L
XR_005961644 X. laevis.S
XR_005961643 X. laevis.S
XM_041564955 X. laevis.S
XM_041564954 X. laevis.S
XM_041564953 X. laevis.S

ESTs (87)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8910143 EL805680 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8960230 EL653817 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
xtbs19B05 CN081431 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
XZT11336 CX311475 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7787923 CX332992 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7626333 CX379524 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620298 CX348156 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7548887 CX491027 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7602748 CX394098 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7534040 CX428408 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534178 CX428370 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575029 CX441801 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563006 CX467431 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7567734 CX508588 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7711596 CX968521 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7708844 CX962849 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7673358 CX883121 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7657041 CX828333 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7525081 CX439768 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7528997 CX425954 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7585365 CX317877 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA045p12 CR584970 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA006e04 CR576151 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA038h23 CR444131 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA022e05 CR438536 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA047d12 CR420379 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas132l15 AL969164 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas094p10 AL968543 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas139a03 AL967644 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas119o04 AL960593 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas105e17 AL960087 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas047m16 AL646174 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas013m04 AL632246 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas001c11 AL594561 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA046p21 BX745440 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA024m22 BX713372 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu098h17 AL802993 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu135d16 AL798914 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu096d05 AL787157 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu069b14 AL781606 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas055o23 AL676313 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu001m14 AL634374 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu043l14 AL658378 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5384057 BQ396678 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:4439705 BG348541 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
xtbs19B05 CN081430 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7548887 CX491026 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563006 CX467430 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7657041 CX828332 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7711596 CX968520 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7708844 CX962848 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7534040 CX428407 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534178 CX428369 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7602748 CX394097 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620298 CX348155 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7585365 CX317876 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas140d06 BX763225 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas139a03 BX759964 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas119o04 BX757060 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas105e17 BX756864 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas055o23 BX747178 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xlk64b14ex DC055527 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk75g03ex DC059461 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk154l23ex DC062447 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8322332 DY545982 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
M109 DV034202 5' X. laevis.L Cornea-lens transdifferentiation library cornea NF stage 50 to NF stage 52
IMAGE:7983245 DR723587 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL466l05ex BP691873 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998H228244 BX850722 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
XL023a09 BJ035405 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL014f20 BJ031710 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6863484 CA986948 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6634096 BU908598 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6630607 BU905711 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3517874 BG348154 5' X. laevis.L Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
IMAGE:3379653 BE506492 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
PBX0086H11 AW639771 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0015F08 AW634069 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxlk75g03ex DC026022 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk104b14ex DC004071 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk154l23ex DC028930 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:7983245 DR723660 3' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL466l05ex BP726272 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL014f20 BJ046745 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL023a09 BJ050028 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3517874 BG439311 3' X. laevis.L Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
IMAGE:3379653 BE191873 3' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9