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Summary Expression Phenotypes Gene Literature (5) GO Terms (22) Nucleotides (424) Proteins (82) Interactants (94) Wiki
XB-GENEPAGE-1218937

Show:     All X. tropicalis X. laevis

Nucleotide sequences for nfyc - Xenopus tropicalis

RefSeq mRNAs(4)
Models - Gene (18)
Models - mRNA (33)
mRNAs (6)
ESTs (167)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_203874 NM_203874.1 nuclear transcription factor Y subunit gamma 2078 bp NP_989205 X. tropicalis
XM_012956657 XM_012956657.1 nuclear transcription factor Y subunit gamma isoform X1 2236 bp XP_012812111 X. tropicalis
XM_012956658 XM_012956658.3 nuclear transcription factor Y subunit gamma isoform X1 2213 bp XP_012812112 X. tropicalis
XM_018091146 XM_018091146.1 nuclear transcription factor Y subunit gamma isoform X1 2027 bp XP_017946635 X. tropicalis

Models - Gene (18)

Source Version Model Species
NCBI 10.0 XBXT10g004371 X. tropicalis
ENSEMBL 10.0 nfyc X. tropicalis
Xenbase 9.1 gene29313 X. tropicalis
ENSEMBL 9.1 nfyc X. tropicalis
JGI 8.0 Xetrov14008356m.g X. tropicalis
JGI 7.1 Xetro.B00230 X. tropicalis
ENSEMBL 4.1 ENSXETG00000025363 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_377000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_377000026 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_377000027 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_377000010 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_377000007 X. tropicalis
JGI 4.1 e_gw1.377.100.1 X. tropicalis
JGI 4.1 e_gw1.377.101.1 X. tropicalis
JGI 4.1 e_gw1.377.102.1 X. tropicalis
JGI 4.1 gw1.377.100.1 X. tropicalis
JGI 4.1 gw1.377.101.1 X. tropicalis
JGI 4.1 gw1.377.102.1 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.0 mRNA021802 X. tropicalis
ENSEMBL 10.0 ENSXETT00000054158 X. tropicalis
ENSEMBL 9.1 ENSXETT00000054158 X. tropicalis
Xenbase 9.1 rna56468 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090384 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067995 X. tropicalis
JGI 8.0 Xetrov14008356m X. tropicalis
JGI 7.1 Xetro.B00230.5 X. tropicalis
JGI 7.1 Xetro.B00230.6 X. tropicalis
JGI 7.1 Xetro.B00230.7 X. tropicalis
JGI 7.1 Xetro.B00230.8 X. tropicalis
JGI 7.1 Xetro.B00230.9 X. tropicalis
JGI 7.1 Xetro.B00230.10 X. tropicalis
JGI 7.1 Xetro.B00230.1 X. tropicalis
JGI 7.1 Xetro.B00230.11 X. tropicalis
JGI 7.1 Xetro.B00230.12 X. tropicalis
JGI 7.1 Xetro.B00230.13 X. tropicalis
JGI 7.1 Xetro.B00230.2 X. tropicalis
JGI 7.1 Xetro.B00230.3 X. tropicalis
JGI 7.1 Xetro.B00230.4 X. tropicalis
JGI 4.1 gw1.377.102.1 X. tropicalis
JGI 4.1 e_gw1.377.101.1 X. tropicalis
JGI 4.1 e_gw1.377.102.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000054158 X. tropicalis
ENSEMBL 4.1 ENSXETT00000054159 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_377000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_377000026 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_377000027 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_377000010 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_377000007 X. tropicalis
JGI 4.1 gw1.377.100.1 X. tropicalis
JGI 4.1 gw1.377.101.1 X. tropicalis
JGI 4.1 e_gw1.377.100.1 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:5383235 BC063353 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TNeu098e17 CR848293 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
NM_203874 X. tropicalis
XM_012956657 X. tropicalis
XM_012956658 X. tropicalis
XM_018091146 X. tropicalis

ESTs (167)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TGas067n17 AL681513 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5307742 BQ389089 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TGas026e03 AL655156 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7612819 CX405523 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:6995843 CF238915 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7624742 CX402359 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7639447 CX384996 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610304 CX376922 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:5383235 BQ395279 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7601220 CX364500 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas037d06 AL647798 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7617098 CX361859 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7618941 CX346118 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7634265 CX337655 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas009a03 AL630075 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7547136 CX501118 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6985476 CF152657 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7550242 CX486098 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5379942 BQ524218 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7523388 CX473336 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas096f17 AL969566 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7520912 CX469216 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7016480 CF524872 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:7562218 CX466312 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas105b21 AL965862 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7562340 CX466170 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7091292 CK653685 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7567806 CX455637 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas117n18 AL956907 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7543145 CX450327 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA056k07 BX729377 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7575396 CX429917 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas123d09 AL955689 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7672325 CX880936 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTpA071l07 BX727965 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7668505 CX856098 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TGas123b17 AL955681 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7708622 CX962281 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTpA045i08 BX727486 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7706545 CX958276 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTpA031b03 BX725323 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7699188 CX932111 5' X. tropicalis NIH_XGC_tropTe5 testis frog
xthr41D22 CN114849 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7699031 CX931330 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas088k20 AL955129 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7710729 CX966787 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
xthr40H15 CN114130 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7738847 DN027363 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
xthr33A10 CN109165 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7738937 DN027322 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
TNeu098e17 AL805618 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7735933 DN021722 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
xthr32J05 CN108796 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
CABC9268 DR840331 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
TNeu087d17 AL805025 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
CABC4600 DR833555 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
TTbA031g12 CR441983 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7848056 DT532608 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
TNeu131e06 AL792970 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7853883 DT395049 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
TTbA079e17 CR432905 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8954608 EL663936 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
st34k23 DC173224 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TNeu094b23 AL791517 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8966487 EL655967 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8958898 EL654872 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8930475 EL680215 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
TTbA072h01 CR428853 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8928919 EL677642 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
TNeu117e13 AL791086 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8927251 EL674313 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
TTbA071k22 CR426027 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu092l17 AL781066 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8889212 EL848063 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TTbA005g20 CR414555 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA027i22 CR413490 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu073i23 AL779514 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu055h23 AL676900 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA004i13 CR408135 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu041b03 AL661193 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA004i07 CR408132 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu010m04 AL638177 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6988545 CF220240 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6990519 CF217591 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
THdA029k16 CR581617 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:6990519 CF217590 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
THdA006i09 CR576576 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA020c03 CR572030 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:5308272 BQ390196 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
THdA017e12 CR568668 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas080f17 AL774866 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
THdA014h13 CR565238 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:5307810 BQ389455 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7601220 CX364499 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas123d09 BX759496 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas117n18 BX759231 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas105b21 BX754883 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas088k20 BX752475 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas067n17 BX748395 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12