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Summary Expression Phenotypes Gene Literature (536) GO Terms (19) Nucleotides (2219) Proteins (64) Interactants (2462) Wiki
XB-GENEPAGE-478944

Show:     All X. tropicalis X. laevis

Nucleotide sequences for odc1 - All

RefSeq mRNAs(4)
Models - Gene (34)
Models - mRNA (43)
mRNAs (9)
ESTs (1632)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001005441 NM_001005441.1 ornithine decarboxylase 2032 bp NP_001005441 X. tropicalis
NM_001086698 NM_001086698.1 ornithine decarboxylase 1 1973 bp NP_001080167 X. laevis.L
XM_018261651 XM_018261651.2 ornithine decarboxylase 1 isoform X1 2052 bp XP_018117140 X. laevis.L
XM_018265940 XM_018265940.1 ornithine decarboxylase 1-like 2045 bp XP_018121429 X. laevis.S

Models - Gene (34)

Source Version Model Species
NCBI 10.1 XBXL10_1g26175 X. laevis.S
NCBI 10.1 XBXL10_1g24388 X. laevis.L
NCBI 10.0 XBXT10g010485 X. tropicalis
ENSEMBL 10.0 odc1 X. tropicalis
Xenbase 9.2 gene8416 X. laevis.S
Xenbase 9.2 gene14836 X. laevis.L
JGI 9.1 Xelaev18030082m.g X. laevis.S
JGI 9.1 Xelaev18028043m.g X. laevis.L
Xenbase 9.1 gene5377 X. tropicalis
ENSEMBL 9.1 odc1 X. tropicalis
JGI 8.0 Xetrov14021198m.g X. tropicalis
JGI 7.2 Xelaev16012798m.g X. laevis.L
JGI 7.1 Xetro.E00370 X. tropicalis
JGI 6.0 XeXenL6RMv10006658m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000003519 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_565000003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5650059 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_565000009 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_565000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_565000008 X. tropicalis
JGI 4.1 e_gw1.565.58.1 X. tropicalis
JGI 4.1 e_gw1.565.59.1 X. tropicalis
JGI 4.1 e_gw1.565.60.1 X. tropicalis
JGI 4.1 gw1.565.58.1 X. tropicalis
JGI 4.1 gw1.565.59.1 X. tropicalis
JGI 4.1 gw1.565.60.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5650006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5650057 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5650058 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5650003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5650008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5650009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5650006 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_565000002 X. tropicalis

mRNAs based on gene models(43)

Source Version Model Species
NCBI 10.1 XBmRNA45658 X. laevis.L
NCBI 10.1 XBmRNA48969 X. laevis.S
ENSEMBL 10.0 ENSXETT00000097616 X. tropicalis
ENSEMBL 10.0 ENSXETT00000007603 X. tropicalis
NCBI 10.0 mRNA051879 X. tropicalis
Xenbase 9.2 rna43279 X. laevis.L
Xenbase 9.2 rna24502 X. laevis.S
ENSEMBL 9.1 ENSXETT00000097616 X. tropicalis
Xenbase 9.1 rna17429 X. tropicalis
JGI 9.1 Xelaev18028043m X. laevis.L
JGI 9.1 Xelaev18030082m X. laevis.S
ENSEMBL 9.1 ENSXETT00000007603 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074544 X. tropicalis
JGI 8.0 Xetrov14021198m X. tropicalis
JGI 7.2 Xelaev16012798m X. laevis.L
JGI 7.1 Xetro.E00370.3 X. tropicalis
JGI 7.1 Xetro.E00370.2 X. tropicalis
JGI 7.1 Xetro.E00370.6 X. tropicalis
JGI 7.1 Xetro.E00370.7 X. tropicalis
JGI 7.1 Xetro.E00370.5 X. tropicalis
JGI 7.1 Xetro.E00370.1 X. tropicalis
JGI 7.1 Xetro.E00370.4 X. tropicalis
JGI 6.0 XeXenL6RMv10006658m X. laevis.L
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_565000002 X. tropicalis
JGI 4.1 e_gw1.565.59.1 X. tropicalis
JGI 4.1 e_gw1.565.60.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000007603 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5650003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5650008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5650009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5650006 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5650006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5650057 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5650058 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5650059 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_565000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_565000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_565000009 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_565000006 X. tropicalis
JGI 4.1 e_gw1.565.58.1 X. tropicalis
JGI 4.1 gw1.565.58.1 X. tropicalis
JGI 4.1 gw1.565.59.1 X. tropicalis
JGI 4.1 gw1.565.60.1 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
IMAGE:5335701 BC074547 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TEgg063i14 CT025275 X. tropicalis
NM_001005441 X. tropicalis
IMAGE:5571216 BC044004 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6865528 BC080991 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
NM_001086698 X. laevis.L
XLODC1 X56316 X. laevis.L
XM_018261651 X. laevis.L
XM_018265940 X. laevis.S

ESTs (1632)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7522889 CX472219 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7523231 CX472918 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas114l02 AL956505 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7563925 CX474137 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564939 CX475503 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas105m18 AL956604 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7536090 CX477340 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas109p17 AL956759 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7536002 CX477391 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas117j16 AL956889 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7536098 CX477395 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas117n12 AL956904 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7536194 CX477398 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7536557 CX477599 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas138n15 AL957927 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7520361 CX480575 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas141h16 AL957974 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7565721 CX482234 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas103l21 AL958383 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7565724 CX482577 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas099d09 AL958489 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7566147 CX482856 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas099d15 AL958492 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7565934 CX483017 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas089m16 AL959645 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7566202 CX483213 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas099g10 AL960962 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7549983 CX485308 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas104e10 AL961107 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7544519 CX486295 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas127l15 AL961438 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7545362 CX487715 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas125p23 AL961996 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7547631 CX488970 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas108o19 AL962689 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7547478 CX489218 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas130b13 AL965275 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7548133 CX489464 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas107i13 AL965596 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7547830 CX490003 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas120d22 AL967187 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7548166 CX490015 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7548866 CX491204 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas139o21 AL967720 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7554192 CX492928 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas136h03 AL967752 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO2668 CX933046 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas114k13 AL967849 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO2977 CX933608 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas004c14 AL593944 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO3767 CX934351 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO3867 CX934526 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas113h02 AL968123 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO4503 CX935671 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas144k22 AL968749 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO4763 CX936144 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas137d19 AL968795 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO4924 CX936445 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas086g08 AL969321 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7703408 CX939716 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas096m18 AL969658 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7703588 CX939989 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas115h15 AL970125 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO7079 CX940343 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO7480 CX941070 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas097b04 AL971009 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO8295 CX955691 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas101n20 AL971218 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO8524 CX956111 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas100p04 AL971295 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO8675 CX956396 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas140c13 AL971550 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO9332 CX957614 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:4439783 BG346903 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:7706427 CX958103 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas001g24 AL594770 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7707109 CX958914 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:4440969 BG512225 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:7708002 CX961577 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas001i20 AL594779 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7708641 CX961707 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:4440896 BG512716 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:7794755 CX963851 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:4440529 BG514887 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:7715271 CX974999 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
TGas002j02 AL595220 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas024g17 AL627476 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:4461319 BG816379 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:4461441 BG884724 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
TGas010j09 AL630433 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas014p17 AL630789 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas019n22 AL631026 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5307352 BQ388436 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TGas015i03 AL631087 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5307412 BQ388740 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TGas015f19 AL631254 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5307870 BQ389139 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TGas021m11 AL632628 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6990709 CF217282 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13