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Summary Expression Phenotypes Gene Literature (17) GO Terms (23) Nucleotides (98) Proteins (45) Interactants (178) Wiki
XB-GENEPAGE-479666

Show:     All X. tropicalis X. laevis

Nucleotide sequences for pou3f4 - All

RefSeq mRNAs(3)
Models - Gene (30)
Models - mRNA (31)
mRNAs (8)
ESTs (20)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001097259 NM_001097259.1 POU domain, class 3, transcription factor 4 2718 bp NP_001090728 X. tropicalis
NM_001100923 NM_001100923.1 POU domain, class 3, transcription factor 4-A 2822 bp NP_001094393 X. laevis.L
NM_001092878 NM_001092878.1 NP_001086347.1 POU domain, class 3, transcription factor 4-B 1275 bp NP_001086347 X. laevis.S

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g35224 X. laevis.L
NCBI 10.1 XBXL10_1g38082 X. laevis.S
NCBI 10.0 XBXT10g014949 X. tropicalis
ENSEMBL 10.0 pou3f4 X. tropicalis
Xenbase 9.2 gene10725 X. laevis.S
Xenbase 9.2 gene4601 X. laevis.L
JGI 9.1 Xelaev18042265m.g X. laevis.S
JGI 9.1 Xelaev18038925m.g X. laevis.L
Xenbase 9.1 gene3392 X. tropicalis
ENSEMBL 9.1 pou3f4 X. tropicalis
JGI 8.0 Xetrov14033483m.g X. tropicalis
JGI 7.2 Xelaev16021813m.g X. laevis.L
JGI 7.1 Xetro.H00751 X. tropicalis
JGI 6.0 XeXenL6RMv10013582m.g X. laevis.L
JGI 6.0 XeXenL6RMv10036725m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000014504 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3840006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3840031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3840029 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3840003 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3840004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3840001 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_384000001 X. tropicalis
JGI 4.1 gw1.384.31.1 X. tropicalis
JGI 4.1 gw1.384.3.1 X. tropicalis
JGI 4.1 gw1.384.29.1 X. tropicalis
JGI 4.1 e_gw1.384.31.1 X. tropicalis
JGI 4.1 e_gw1.384.3.1 X. tropicalis
JGI 4.1 e_gw1.384.29.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_384000006 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.1 XBmRNA71970 X. laevis.S
NCBI 10.1 XBmRNA66496 X. laevis.L
ENSEMBL 10.0 ENSXETT00000031753 X. tropicalis
NCBI 10.0 mRNA073947 X. tropicalis
ENSEMBL 10.0 ENSXETT00000109972 X. tropicalis
Xenbase 9.2 rna13419 X. laevis.L
Xenbase 9.2 rna31172 X. laevis.S
Xenbase 9.1 rna11120 X. tropicalis
JGI 9.1 Xelaev18042265m X. laevis.S
JGI 9.1 Xelaev18038925m X. laevis.L
ENSEMBL 9.1 ENSXETT00000031753 X. tropicalis
JGI 8.0 Xetrov14033483m X. tropicalis
JGI 7.2 Xelaev16021813m X. laevis.L
JGI 7.1 Xetro.H00751.1 X. tropicalis
JGI 6.0 XeXenL6RMv10013582m X. laevis.L
JGI 6.0 XeXenL6RMv10036725m X. laevis.L
JGI 4.1 e_gw1.384.31.1 X. tropicalis
JGI 4.1 e_gw1.384.3.1 X. tropicalis
JGI 4.1 e_gw1.384.29.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031753 X. tropicalis
JGI 4.1 gw1.384.31.1 X. tropicalis
JGI 4.1 gw1.384.29.1 X. tropicalis
JGI 4.1 gw1.384.3.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_384000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_384000006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3840029 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3840031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3840003 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3840004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3840001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3840006 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
IMAGE:7655835 BC127328 X. tropicalis NIH_XGC_tropBrn3 brain frog
NM_001097259 X. tropicalis
IMAGE:4032407 BC076747 X. laevis.L
NM_001100923 X. laevis.L
U17654 X. laevis.L
X59055 X59055 X. laevis.L
IMAGE:7010002 BC075142 X. laevis.S
NM_001092878 X. laevis.S

ESTs (20)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7658523 CX837192 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
XZT192 CX358705 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7658885 CX838091 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7664847 CX849405 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7787428 CX330047 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7749283 DN046234 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:8883211 EL838621 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7655835 CX826148 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8889751 EL849077 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
st36g13 DC173704 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8889751 EL849078 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
rst36g13 DC143451 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7787428 CX330046 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT192 CX358704 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7655835 CX826147 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7658523 CX837191 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7658885 CX838090 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7749283 DN046233 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:8883211 EL838622 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
za45g12 AW158828 5' X. laevis.L Xenopus EST library brain NF stage 45 to NF stage 66