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Summary Expression Phenotypes Gene Literature (228) GO Terms (47) Nucleotides (208) Proteins (86) Interactants (1798) Wiki
XB-GENEPAGE-482739

Show:     All X. tropicalis X. laevis

Nucleotide sequences for pax3 - Xenopus tropicalis

RefSeq mRNAs(5)
Models - Gene (25)
Models - mRNA (26)
mRNAs (7)
ESTs (36)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001006775 NM_001006775.2 paired box protein Pax-3 3256 bp NP_001006776 X. tropicalis
XM_012970301 XM_012970301.3 paired box protein Pax-3 isoform X1 3805 bp XP_012825755 X. tropicalis
XM_012970302 XM_012970302.3 paired box protein Pax-3 isoform X2 3802 bp XP_012825756 X. tropicalis
XM_012970303 XM_012970303.3 paired box protein Pax-3 isoform X3 3790 bp XP_012825757 X. tropicalis
XM_012970306 XM_012970306.3 paired box protein Pax-3 isoform X4 3730 bp XP_012825760 X. tropicalis

Models - Gene (25)

Source Version Model Species
NCBI 10.0 XBXT10g019243 X. tropicalis
ENSEMBL 10.0 pax3 X. tropicalis
Xenbase 9.1 gene30196 X. tropicalis
ENSEMBL 9.1 pax3 X. tropicalis
JGI 7.1 Xetro.I00810 X. tropicalis
ENSEMBL 4.1 ENSXETG00000007640 X. tropicalis
JGI 4.1 gw1.224.80.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2240007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2240080 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2240108 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2240109 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2240001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2240014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2240002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_224000003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_224000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_224000013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_224000014 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_224000002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2240013 X. tropicalis
JGI 4.1 e_gw1.224.108.1 X. tropicalis
JGI 4.1 e_gw1.224.109.1 X. tropicalis
JGI 4.1 e_gw1.224.80.1 X. tropicalis
JGI 4.1 gw1.224.108.1 X. tropicalis
JGI 4.1 gw1.224.109.1 X. tropicalis

mRNAs based on gene models(26)

Source Version Model Species
ENSEMBL 10.0 ENSXETT00000105182 X. tropicalis
ENSEMBL 10.0 ENSXETT00000016629 X. tropicalis
NCBI 10.0 mRNA095092 X. tropicalis
ENSEMBL 9.1 ENSXETT00000016629 X. tropicalis
Xenbase 9.1 rna57845 X. tropicalis
JGI 7.1 Xetro.I00810.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2240014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2240002 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2240007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2240080 X. tropicalis
JGI 4.1 e_gw1.224.108.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2240109 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_224000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_224000013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_224000014 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_224000002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_224000003 X. tropicalis
JGI 4.1 gw1.224.108.1 X. tropicalis
JGI 4.1 gw1.224.109.1 X. tropicalis
JGI 4.1 gw1.224.80.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2240108 X. tropicalis
JGI 4.1 e_gw1.224.109.1 X. tropicalis
JGI 4.1 e_gw1.224.80.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000016628 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2240001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2240013 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:6993688 BC075577 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
pax3-HAR129 CR855399 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
NM_001006775 X. tropicalis
XM_012970301 X. tropicalis
XM_012970302 X. tropicalis
XM_012970303 X. tropicalis
XM_012970306 X. tropicalis

ESTs (36)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu076d04 AL781956 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
THdA025m11 CR581257 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TNeu075l15 AL778792 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
THdA023a02 CR570811 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7555048 CX501731 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu058i11 AL679634 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7551972 CX493904 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
pax3-HAR129 AL658809 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7541459 CX463145 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
pax3-HAR79 AL656612 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7538087 CX447191 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6993688 CF237988 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TGas125c22 AL962073 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
st109m11 DC194335 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st114k16 DC193157 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TTbA066h12 CR429459 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu029a17 BX702685 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu129k16 AL797835 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA001a16 CR407972 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
rst114k16 DC164440 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TNeu129k16 BX698583 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu076d04 BX685640 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu075l15 BX684747 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu058i11 BX684066 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA066h12 CR429460 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA014j09 CR428086 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA001a16 CR407973 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA025m11 CR581258 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA023a02 CR570812 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7555048 CX501730 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551972 CX493903 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541459 CX463144 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7538087 CX447190 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7752045 DN051671 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
rst115k16 DC164696 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TGas125c22 BX757732 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12