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Summary Expression Phenotypes Gene Literature (8) GO Terms (25) Nucleotides (76) Proteins (50) Interactants (104) Wiki
XB-GENEPAGE-485815

Show:     All X. tropicalis X. laevis

Nucleotide sequences for sim1 - Xenopus tropicalis

RefSeq mRNAs(3)
Models - Gene (20)
Models - mRNA (26)
mRNAs (3)
ESTs (2)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
XM_002932141 XM_002932141.5 single-minded homolog 1 isoform X2 2345 bp XP_002932187 X. tropicalis
XM_004914545 XM_004914545.4 single-minded homolog 1 isoform X1 2874 bp XP_004914602 X. tropicalis
XM_004914546 XM_004914546.4 single-minded homolog 1 isoform X3 2468 bp XP_004914603 X. tropicalis

Models - Gene (20)

Source Version Model Species
NCBI 10.0 XBXT10g017917 X. tropicalis
ENSEMBL 10.0 sim1 X. tropicalis
Xenbase 9.1 gene28463 X. tropicalis
ENSEMBL 9.1 sim1 X. tropicalis
JGI 7.1 Xetro.E00614 X. tropicalis
ENSEMBL 4.1 ENSXETG00000002406 X. tropicalis
JGI 4.1 gw1.19.41.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_190005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_190041 X. tropicalis
JGI 4.1 estExt_Genewise1.C_190270 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_190012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_190002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_19000012 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_19000002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_190269 X. tropicalis
JGI 4.1 e_gw1.19.269.1 X. tropicalis
JGI 4.1 e_gw1.19.270.1 X. tropicalis
JGI 4.1 e_gw1.19.41.1 X. tropicalis
JGI 4.1 gw1.19.269.1 X. tropicalis
JGI 4.1 gw1.19.270.1 X. tropicalis

mRNAs based on gene models(26)

Source Version Model Species
NCBI 10.0 mRNA088461 X. tropicalis
ENSEMBL 10.0 ENSXETT00000080845 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098975 X. tropicalis
ENSEMBL 9.1 ENSXETT00000005117 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069095 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076091 X. tropicalis
Xenbase 9.1 rna55094 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080845 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089914 X. tropicalis
JGI 7.1 Xetro.E00614.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_190270 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_19000012 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_19000002 X. tropicalis
JGI 4.1 gw1.19.269.1 X. tropicalis
JGI 4.1 gw1.19.270.1 X. tropicalis
JGI 4.1 gw1.19.41.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_190002 X. tropicalis
JGI 4.1 e_gw1.19.270.1 X. tropicalis
JGI 4.1 e_gw1.19.41.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000005117 X. tropicalis
ENSEMBL 4.1 ENSXETT00000005120 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_190012 X. tropicalis
JGI 4.1 e_gw1.19.269.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_190005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_190041 X. tropicalis
JGI 4.1 estExt_Genewise1.C_190269 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
XM_002932141 X. tropicalis
XM_004914545 X. tropicalis
XM_004914546 X. tropicalis

ESTs (2)

Clone Accession 5'/3' Species Library Anatomy Stage
sim1-865 CX468007 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
sim1-865 CX468006 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5